Miyakogusa Predicted Gene

Lj6g3v1707240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1707240.1 Non Chatacterized Hit- tr|I1MGM1|I1MGM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28767
PE,70.54,0,seg,NULL; no description,Armadillo-like helical; SUBFAMILY
NOT NAMED,NULL; CONDENSIN,Condensin subun,CUFF.59814.1
         (685 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15920.1                                                       872   0.0  
Glyma09g04940.1                                                       867   0.0  
Glyma04g11760.1                                                       146   9e-35
Glyma04g11950.1                                                       111   3e-24

>Glyma15g15920.1 
          Length = 1294

 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/670 (65%), Positives = 515/670 (76%), Gaps = 12/670 (1%)

Query: 1   MALIPLSHFPETLKSLVHTIAEVLAVALETCGNTAENSKLLGLCSRVLKEALKPEHGDAS 60
           M LI L+ FPETLKSL+ T+AE+   +L+TCGN A  S+LL LCS VLKE LK EHG+ S
Sbjct: 141 MGLIHLNRFPETLKSLIQTVAEIPVTSLDTCGNAAVYSRLLSLCSHVLKEVLKSEHGEPS 200

Query: 61  DTAAEVLKSLSSILFMPRSQARTFALGFVTGLAGDDSDGVKKALVNFPRYLAKRAPEKSE 120
           +TAAEVLKSL S++ M +S ARTFA+GFVTGL+ +  DGVKKALVNFPRYLAK+APEK+E
Sbjct: 201 NTAAEVLKSLCSLVLMAKSLARTFAIGFVTGLS-NQCDGVKKALVNFPRYLAKKAPEKAE 259

Query: 121 LRALAVDSVVEVVRVMALEDQVEFVRFVLKMGQGKQNLRLLAVDLMLNMVTTWKDPLRVD 180
            RALAVDS++EVV+VM  +DQ+ FV++V++M QGK NLRLLAVDL+LN+VT+ +DPL V 
Sbjct: 260 PRALAVDSIMEVVKVMEFDDQIAFVKYVVQMAQGKSNLRLLAVDLILNLVTSLRDPLGV- 318

Query: 181 LEEEGNEAWGVWCLEALVKRCSDVSAVVRARALSNLAQMVGFLSREANARVALKEFXX-X 239
            E EG+EAWGVWCLEALVKRCSDVS  +RARALSNLAQ+VGFLSR       LKEF    
Sbjct: 319 -ESEGSEAWGVWCLEALVKRCSDVSGAIRARALSNLAQLVGFLSRGERTSAVLKEFTGFG 377

Query: 240 XXXXXXXXXXXXXLLRKRCVDEXXXXXXXXXXXXPNLTALLGGAIDDVLLKAMGMACSDP 299
                        +LR+RC+D+             NLT+LLGGAID+V+LK MGMACSDP
Sbjct: 378 RVGDGNVGGGMNDMLRRRCMDDKAAVRKAALLLVTNLTSLLGGAIDEVVLKTMGMACSDP 437

Query: 300 LVSVRKAAVAALSEVFRAFSSETVITEWLHSVPRLITDNESNIQEECENMFQELVLDQIX 359
           L+S+RKAA+ ALSE FR FS+ETVITEWL SVP LITDNES+IQEECENMF+ELVLD+I 
Sbjct: 438 LISMRKAAITALSEAFRTFSAETVITEWLRSVPHLITDNESSIQEECENMFKELVLDRIS 497

Query: 360 XXXXXXXXXXXXXXNRNVKGKFLDKEMEMLFPQGILYLLREICNGDVSPWVKKICTSLGK 419
                         NR +KGK +D EME LFP G LYLLREIC+G+VSPWVKKICT+LGK
Sbjct: 498 RAATATSSYSEPLSNRKMKGKGVDNEMEKLFPNGTLYLLREICHGEVSPWVKKICTNLGK 557

Query: 420 KKRMNEKIVSALQNIISVSENIWLSHSMPIKKWTAPPGAWFLLSEVSAFLPNAVEQGFIF 479
           KKR+N KIV+ALQNII  SE+IWLSHSMPI+KWTAPPGAWFLLSEVS FL   V+  F+ 
Sbjct: 558 KKRINHKIVTALQNIIRASESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKVVDWEFLH 617

Query: 480 HHWELFDKHEVEGELKWPSVQRNDFEEEESIECNSVAWASDRVFLLQTISNVFVEMPCDH 539
           HHW+L DKHEVEGE K P VQRN   EEESIECN VAWASDRVFLLQTISNV VE+P   
Sbjct: 618 HHWQLLDKHEVEGEFKSPFVQRNASAEEESIECNHVAWASDRVFLLQTISNVSVELP--- 674

Query: 540 AAQDPEDPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALISTCVD 599
               PE PAA L+  L++RV +FNMHSTEVDAHLKA+KTL KRKASN+ E +AL+     
Sbjct: 675 ----PE-PAADLAHNLLKRVLQFNMHSTEVDAHLKALKTLCKRKASNLKEAEALVLKWFH 729

Query: 600 LVLPKAYEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVYTIGSL 659
            VL +A  I+EKFI ENS +N E  FFTPPRS TRKGRKS+   K+L K ITA+YT+GSL
Sbjct: 730 QVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTRKGRKSVAKSKALSKAITAIYTVGSL 789

Query: 660 VIVFPSADSS 669
           VIV PSAD S
Sbjct: 790 VIVCPSADMS 799


>Glyma09g04940.1 
          Length = 1298

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/670 (64%), Positives = 513/670 (76%), Gaps = 12/670 (1%)

Query: 1   MALIPLSHFPETLKSLVHTIAEVLAVALETCGNTAENSKLLGLCSRVLKEALKPEHGDAS 60
           M LI L+ FPETLKSL+ T+AE+   +L TCGN A  S+LL LCS VLKE LK EHG+ S
Sbjct: 145 MGLIHLNRFPETLKSLIQTVAEIPVTSLNTCGNAAVYSRLLSLCSHVLKEVLKSEHGEPS 204

Query: 61  DTAAEVLKSLSSILFMPRSQARTFALGFVTGLAGDDSDGVKKALVNFPRYLAKRAPEKSE 120
           +TAAEVLKSL S++ M +SQARTFALGFVT L G+  D VKKALVNFPRYLAK+APEK+E
Sbjct: 205 NTAAEVLKSLCSLVLMAKSQARTFALGFVTSL-GNQCDDVKKALVNFPRYLAKKAPEKAE 263

Query: 121 LRALAVDSVVEVVRVMALEDQVEFVRFVLKMGQGKQNLRLLAVDLMLNMVTTWKDPLRVD 180
            RALAV+S++EVV+VM  +DQ+ FV++V++M QGK +LRLLAVDL+LN+V + KDPL V+
Sbjct: 264 PRALAVESIMEVVKVMGFDDQIAFVKYVVQMAQGKSSLRLLAVDLILNLVMSLKDPLGVE 323

Query: 181 LEEEGNEAWGVWCLEALVKRCSDVSAVVRARALSNLAQMVGFLSREANARVALKEFXX-X 239
            EE  +E WG+WCLE L+KRCSDVS  +RARALSNLAQ+VGFLSR     V LKEF    
Sbjct: 324 SEE--SEVWGIWCLEVLLKRCSDVSGAIRARALSNLAQLVGFLSRGERTSVVLKEFMGFG 381

Query: 240 XXXXXXXXXXXXXLLRKRCVDEXXXXXXXXXXXXPNLTALLGGAIDDVLLKAMGMACSDP 299
                        +LR+RC+D+             NLT+LLGGAID+V+LK MGMACSDP
Sbjct: 382 KVGDGNVEGGMNDMLRRRCMDDKAAVRKAALLLVTNLTSLLGGAIDEVVLKTMGMACSDP 441

Query: 300 LVSVRKAAVAALSEVFRAFSSETVITEWLHSVPRLITDNESNIQEECENMFQELVLDQIX 359
           L+S+RKAA+ ALSE FR FS+ETVITEWLHSVPRLI+DNES+IQEECENMF+ELVLD+I 
Sbjct: 442 LISMRKAAITALSEAFRTFSAETVITEWLHSVPRLISDNESSIQEECENMFKELVLDRII 501

Query: 360 XXXXXXXXXXXXXXNRNVKGKFLDKEMEMLFPQGILYLLREICNGDVSPWVKKICTSLGK 419
                         NR +KGK LD EMEM FP G LYLLREIC+G+VSPWVKKICT+LGK
Sbjct: 502 RAATATSSYSEPLSNRKMKGKGLDNEMEMFFPNGTLYLLREICHGEVSPWVKKICTNLGK 561

Query: 420 KKRMNEKIVSALQNIISVSENIWLSHSMPIKKWTAPPGAWFLLSEVSAFLPNAVEQGFIF 479
           K R+N KIV+ALQNII VSE+IWLSHSMPI+KWTAPPGAWFLLSEVS FL   V+  F+ 
Sbjct: 562 KNRINHKIVTALQNIIRVSESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKVVDWEFLH 621

Query: 480 HHWELFDKHEVEGELKWPSVQRNDFEEEESIECNSVAWASDRVFLLQTISNVFVEMPCDH 539
           HHW+L DKHEVEGE K P VQRN  EEEESIECN VAWASDRVFLLQTISNV VE+    
Sbjct: 622 HHWQLLDKHEVEGEFKSPFVQRNASEEEESIECNHVAWASDRVFLLQTISNVSVEL---- 677

Query: 540 AAQDPEDPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALISTCVD 599
               P  PAA L+  L++RV++FNMHSTEVDAHLKA+KTL KRKASN+ E +AL+   V 
Sbjct: 678 ----PPVPAADLAHNLLKRVEQFNMHSTEVDAHLKALKTLCKRKASNLEEAEALVLKWVH 733

Query: 600 LVLPKAYEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVYTIGSL 659
            VL +A  I+EKFI ENS +N E  FFTPPRS T KGRKS+   KSL K +TA+YT+GS+
Sbjct: 734 QVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTSKGRKSVAKSKSLSKAVTAIYTVGSV 793

Query: 660 VIVFPSADSS 669
           VIV PSAD S
Sbjct: 794 VIVCPSADMS 803


>Glyma04g11760.1 
          Length = 273

 Score =  146 bits (368), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 92/124 (74%)

Query: 546 DPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALISTCVDLVLPKA 605
           +PA  L+  L++ V++FNMHS EVDAHLKA+KTL KRKASN+ E +AL+   V  VL +A
Sbjct: 3   EPATDLAHNLLKWVEQFNMHSIEVDAHLKALKTLFKRKASNLEEAEALVLKWVHQVLSRA 62

Query: 606 YEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVYTIGSLVIVFPS 665
             I+EKFI ENS +N E  FFTPPRS T KGRKS+   KSL K + A+YT+GS+VIV PS
Sbjct: 63  SGIIEKFISENSEQNAEGSFFTPPRSETSKGRKSVAKSKSLSKAVIAIYTVGSVVIVCPS 122

Query: 666 ADSS 669
           AD S
Sbjct: 123 ADMS 126


>Glyma04g11950.1 
          Length = 142

 Score =  111 bits (277), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 78/124 (62%), Gaps = 19/124 (15%)

Query: 546 DPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALISTCVDLVLPKA 605
           +PA  L   L++ V++FNMHS EVDA LKA+KTL KRKASN+ E +AL+   V  VL +A
Sbjct: 3   EPATDLDHNLLKWVEQFNMHSIEVDALLKALKTLFKRKASNLEEAEALVLKWVHQVLSRA 62

Query: 606 YEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVYTIGSLVIVFPS 665
             I+EKFI ENS +N E  FFTPPR                   I A+YT+GS+VIV PS
Sbjct: 63  SGIIEKFISENSEQNAEGSFFTPPR-------------------IIAIYTVGSVVIVCPS 103

Query: 666 ADSS 669
           AD S
Sbjct: 104 ADMS 107