Miyakogusa Predicted Gene

Lj6g3v1707240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1707240.1 Non Characterized Hit- tr|I1MGM1|I1MGM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28767
PE,70.54,0,seg,NULL; no description,Armadillo-like helical; SUBFAMILY
NOT NAMED,NULL; CONDENSIN,Condensin subun,CUFF.59814.1
         (685 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g436590.1 | condensin-2 complex subunit D3 | HC | chr2:142...   831   0.0  
Medtr2g436590.2 | condensin-2 complex subunit D3 | HC | chr2:142...   828   0.0  
Medtr7g110590.1 | condensin-2 complex subunit D3-like protein | ...   173   6e-43

>Medtr2g436590.1 | condensin-2 complex subunit D3 | HC |
           chr2:14240526-14233918 | 20130731
          Length = 1330

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/680 (62%), Positives = 515/680 (75%), Gaps = 15/680 (2%)

Query: 1   MALIPLSHFPETLKSLVHTIAEVLAVALETCGNTAENSKLLGLCSRVLKEALKPEHGDAS 60
           M LI L  FPE+LKSL+ TI+EV   A+E+C N  +  +L+GLCS++LKE LKPEHG+ S
Sbjct: 171 MGLIHLDRFPESLKSLIQTISEVPLTAIESC-NEVQYGRLVGLCSKILKEVLKPEHGEVS 229

Query: 61  DTAAEVLKSLSSILFMPRSQARTFALGFVTGLAGDDSDGVKKALVNFPRYLAKRAPEKSE 120
           +TAAEVLK++S  + MP+SQ R+FA+GFV  L+  DSDGV+KALVNFPRYLA +AP+K++
Sbjct: 230 ETAAEVLKAISPFVVMPKSQVRSFAVGFVISLS-RDSDGVRKALVNFPRYLANKAPDKAD 288

Query: 121 LRALAVDSVVEVVRVMALEDQVEFVRFVLKMGQGKQNLRLLAVDLMLNMVTTWKDPLRVD 180
            RALAVD ++EVVRVMA+ DQ+EFV++V+KM QGK NLRLLAVDL+LN+VT  KDPL V+
Sbjct: 289 PRALAVDFIMEVVRVMAVGDQIEFVKYVVKMSQGKTNLRLLAVDLILNLVTLLKDPLGVN 348

Query: 181 L--EEEGNEAWGVWCLEALVKRCSDVSAVVRARALSNLAQMVGFLSREANARVALKEFXX 238
              EEEGN AWG+WCLEALVKRCSDVSA +R RA+S LAQ+VGFLS    A V LKEF  
Sbjct: 349 STDEEEGNVAWGIWCLEALVKRCSDVSATIRGRAMSTLAQVVGFLSGSEKASVVLKEFMG 408

Query: 239 --XXXXXXXXXXXXXXLLRKRCVDEXXXXXXXXXXXXPNLTALLGGAIDDVLLKAMGMAC 296
                           +LR+RCVDE             NLTALLGGAID+V+LK MGMAC
Sbjct: 409 FGDGNVAGVGGKGINEMLRRRCVDEKAVVRKAALLFVTNLTALLGGAIDEVVLKTMGMAC 468

Query: 297 SDPLVSVRKAAVAALSEVFRAFSSETVITEWLHSVPRLITDNESNIQEECENMFQELVLD 356
           SD L+S+RKAA AALSE FR FS+ETV TEWLHSVPR I DNE++IQEECEN+FQELVLD
Sbjct: 469 SDSLLSIRKAAAAALSEAFRTFSAETVTTEWLHSVPRQIADNETSIQEECENLFQELVLD 528

Query: 357 QIXXXXXXXXXXXXXXXNRNVKGKFLDKEMEMLFPQGILYLLREICNGDVSPWVKKICTS 416
           +I               +   KGK LD +M+M  PQGILYLLREICNG+VSPWVKKICT+
Sbjct: 529 RISRTAAATSSYIEPASSIKKKGKGLDNKMDMPVPQGILYLLREICNGEVSPWVKKICTN 588

Query: 417 LGKKKRMNEKIVSALQNIISVSENIWLSHSMPIKKWTAPPGAWFLLSEVSAFLPNAVEQG 476
           LGKKKR+N KIV+ALQNII VSE+IWL+HS PI+KWTAP GAWFLLSEVS FLP AV+  
Sbjct: 589 LGKKKRLNHKIVTALQNIIKVSESIWLNHSKPIEKWTAPQGAWFLLSEVSVFLPKAVDWE 648

Query: 477 FIFHHWELFDKHEVEGELKWPSVQRNDFEEEESIECNSVAWASDRVFLLQTISNVFVEMP 536
           F+ HHW+L DKH+V+GE + P VQ N FE +ESIECN+VAWASDRVFLLQTISNV VE+P
Sbjct: 649 FLHHHWQLLDKHKVKGEFRSPVVQINAFEGDESIECNNVAWASDRVFLLQTISNVSVELP 708

Query: 537 CDHAAQDPEDPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALIST 596
                    DPAA L+  L++RV++FNMH+TEVDAH+KA+KTL KRKAS+   E+A++  
Sbjct: 709 T--------DPAADLAHNLLKRVEKFNMHATEVDAHVKALKTLCKRKASDAATEEAIVLK 760

Query: 597 CVDLVLPKAYEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVYTI 656
            V  VL +A +I+E FI +NS +N E++FFTPPRS   KGRKS    KSL K ITA+YTI
Sbjct: 761 WVHQVLSRASQIIETFISDNSEQNAETDFFTPPRSGPSKGRKSGRKRKSLSKAITAIYTI 820

Query: 657 GSLVIVFPSAD-SSITAYYH 675
           GSL+IV PSAD S+I    H
Sbjct: 821 GSLIIVCPSADMSAIIPLLH 840


>Medtr2g436590.2 | condensin-2 complex subunit D3 | HC |
           chr2:14240526-14233948 | 20130731
          Length = 1010

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/680 (62%), Positives = 515/680 (75%), Gaps = 15/680 (2%)

Query: 1   MALIPLSHFPETLKSLVHTIAEVLAVALETCGNTAENSKLLGLCSRVLKEALKPEHGDAS 60
           M LI L  FPE+LKSL+ TI+EV   A+E+C N  +  +L+GLCS++LKE LKPEHG+ S
Sbjct: 171 MGLIHLDRFPESLKSLIQTISEVPLTAIESC-NEVQYGRLVGLCSKILKEVLKPEHGEVS 229

Query: 61  DTAAEVLKSLSSILFMPRSQARTFALGFVTGLAGDDSDGVKKALVNFPRYLAKRAPEKSE 120
           +TAAEVLK++S  + MP+SQ R+FA+GFV  L+  DSDGV+KALVNFPRYLA +AP+K++
Sbjct: 230 ETAAEVLKAISPFVVMPKSQVRSFAVGFVISLS-RDSDGVRKALVNFPRYLANKAPDKAD 288

Query: 121 LRALAVDSVVEVVRVMALEDQVEFVRFVLKMGQGKQNLRLLAVDLMLNMVTTWKDPLRVD 180
            RALAVD ++EVVRVMA+ DQ+EFV++V+KM QGK NLRLLAVDL+LN+VT  KDPL V+
Sbjct: 289 PRALAVDFIMEVVRVMAVGDQIEFVKYVVKMSQGKTNLRLLAVDLILNLVTLLKDPLGVN 348

Query: 181 L--EEEGNEAWGVWCLEALVKRCSDVSAVVRARALSNLAQMVGFLSREANARVALKEFXX 238
              EEEGN AWG+WCLEALVKRCSDVSA +R RA+S LAQ+VGFLS    A V LKEF  
Sbjct: 349 STDEEEGNVAWGIWCLEALVKRCSDVSATIRGRAMSTLAQVVGFLSGSEKASVVLKEFMG 408

Query: 239 --XXXXXXXXXXXXXXLLRKRCVDEXXXXXXXXXXXXPNLTALLGGAIDDVLLKAMGMAC 296
                           +LR+RCVDE             NLTALLGGAID+V+LK MGMAC
Sbjct: 409 FGDGNVAGVGGKGINEMLRRRCVDEKAVVRKAALLFVTNLTALLGGAIDEVVLKTMGMAC 468

Query: 297 SDPLVSVRKAAVAALSEVFRAFSSETVITEWLHSVPRLITDNESNIQEECENMFQELVLD 356
           SD L+S+RKAA AALSE FR FS+ETV TEWLHSVPR I DNE++IQEECEN+FQELVLD
Sbjct: 469 SDSLLSIRKAAAAALSEAFRTFSAETVTTEWLHSVPRQIADNETSIQEECENLFQELVLD 528

Query: 357 QIXXXXXXXXXXXXXXXNRNVKGKFLDKEMEMLFPQGILYLLREICNGDVSPWVKKICTS 416
           +I               +   KGK LD +M+M  PQGILYLLREICNG+VSPWVKKICT+
Sbjct: 529 RISRTAAATSSYIEPASSIKKKGKGLDNKMDMPVPQGILYLLREICNGEVSPWVKKICTN 588

Query: 417 LGKKKRMNEKIVSALQNIISVSENIWLSHSMPIKKWTAPPGAWFLLSEVSAFLPNAVEQG 476
           LGKKKR+N KIV+ALQNII VSE+IWL+HS PI+KWTAP GAWFLLSEVS FLP AV+  
Sbjct: 589 LGKKKRLNHKIVTALQNIIKVSESIWLNHSKPIEKWTAPQGAWFLLSEVSVFLPKAVDWE 648

Query: 477 FIFHHWELFDKHEVEGELKWPSVQRNDFEEEESIECNSVAWASDRVFLLQTISNVFVEMP 536
           F+ HHW+L DKH+V+GE + P VQ N FE +ESIECN+VAWASDRVFLLQTISNV VE+P
Sbjct: 649 FLHHHWQLLDKHKVKGEFRSPVVQINAFEGDESIECNNVAWASDRVFLLQTISNVSVELP 708

Query: 537 CDHAAQDPEDPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALIST 596
                    DPAA L+  L++RV++FNMH+TEVDAH+KA+KTL KRKAS+   E+A++  
Sbjct: 709 T--------DPAADLAHNLLKRVEKFNMHATEVDAHVKALKTLCKRKASDAATEEAIVLK 760

Query: 597 CVDLVLPKAYEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVYTI 656
            V  VL +A +I+E FI +NS +N E++FFTPPRS   KGRKS    KSL K ITA+YTI
Sbjct: 761 WVHQVLSRASQIIETFISDNSEQNAETDFFTPPRSGPSKGRKSGRKRKSLSKAITAIYTI 820

Query: 657 GSLVIVFPSAD-SSITAYYH 675
           GSL+IV PSAD S+I    H
Sbjct: 821 GSLIIVCPSADMSAIIPLLH 840


>Medtr7g110590.1 | condensin-2 complex subunit D3-like protein | HC
           | chr7:45323907-45319269 | 20130731
          Length = 854

 Score =  173 bits (438), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 126/214 (58%), Gaps = 34/214 (15%)

Query: 95  DDSDGVKKALVNFPRYLAKRAPEKSELRALAVDSVVEVVRVMALEDQVEFVRFVLKMGQG 154
           D S+GVKKAL NFPRYLA +AP+K+E R  A+               +EFV++ +KM  G
Sbjct: 6   DCSNGVKKALANFPRYLANKAPDKAEPRDKAL---------------IEFVKYAVKMSLG 50

Query: 155 KQNLRLLAVDLMLNMVTTWKDPLRVDLEEEGNEAWGVWCLEALVKRCSDVSAVVRARALS 214
           K NLRLLAVDL+LNM+T+ KDPL V                 LVKRCSD SA++RA+AL 
Sbjct: 51  KVNLRLLAVDLILNMLTSLKDPLGV-----------------LVKRCSDFSAMIRAKALP 93

Query: 215 NLAQMVGFLSREANARVALKEFXX--XXXXXXXXXXXXXXLLRKRCVDEXXXXXXXXXXX 272
           +LAQ++ FLS    A V LKEF                  +LR+RCVDE           
Sbjct: 94  SLAQVLRFLSGNDKASVVLKEFLGFDDGNVVDVGGKGINEMLRRRCVDEKAIVRKAALLL 153

Query: 273 XPNLTALLGGAIDDVLLKAMGMACSDPLVSVRKA 306
             NLTALLGGA D+V LK MGMACSD LVS+RKA
Sbjct: 154 VTNLTALLGGATDEVGLKTMGMACSDSLVSIRKA 187



 Score =  127 bits (320), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 16/91 (17%)

Query: 380 KFLDKEMEMLFPQGILYLLREICNGDVSPWVKKICTSLGKKKRMNEKIVSALQNIISVSE 439
           K LDKEM+M FPQGILYLLREICNG+                R+N KIV+ALQ I+ VSE
Sbjct: 189 KRLDKEMDMPFPQGILYLLREICNGE----------------RLNHKIVTALQKIVEVSE 232

Query: 440 NIWLSHSMPIKKWTAPPGAWFLLSEVSAFLP 470
           +IWL+HS PI+KWTAPPGAWFLLSEVSAFLP
Sbjct: 233 SIWLNHSKPIEKWTAPPGAWFLLSEVSAFLP 263



 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 20/159 (12%)

Query: 523 FLLQTISNVFVEMPCDHAAQDPEDPAAGLSFKLIERVQEFNMHSTE-----VDAHLKAVK 577
           FLL  +S    ++P + AA D E         L++R+++FNMHST+         L+ + 
Sbjct: 253 FLLSEVSAFLPKLP-NEAATDLEK-------NLLDRIKKFNMHSTKFFMDWAGGPLEIIT 304

Query: 578 TLLKRKASNIMEEKALISTCVDLVLPKAYEIVEKFILENSGENTESEFFTPPRSRTRKGR 637
           +++      + E +AL+   V   L  A +I+E FI +NS +N +++FFTPPRS   KGR
Sbjct: 305 SIV------LGEAEALVLIRVHDSLSIASQIIEAFISDNSEQNAQTDFFTPPRSGPSKGR 358

Query: 638 KSIGMGKSLLKTITAVYTIGSLVIVFPSAD-SSITAYYH 675
           KS+   KSL K +TA+YTIGSLVIV P AD S++T+  H
Sbjct: 359 KSVRKRKSLSKPVTAIYTIGSLVIVCPCADISTVTSLLH 397