Miyakogusa Predicted Gene

Lj6g3v1707240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1707240.1 Non Chatacterized Hit- tr|I1MGM1|I1MGM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28767
PE,70.54,0,seg,NULL; no description,Armadillo-like helical; SUBFAMILY
NOT NAMED,NULL; CONDENSIN,Condensin subun,CUFF.59814.1
         (685 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15890.1 | Symbols:  | binding | chr4:9017453-9022745 FORWARD...   613   e-175

>AT4G15890.1 | Symbols:  | binding | chr4:9017453-9022745 FORWARD
           LENGTH=1314
          Length = 1314

 Score =  613 bits (1581), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 321/682 (47%), Positives = 449/682 (65%), Gaps = 27/682 (3%)

Query: 1   MALIPLSHFPETLKSLVHTIAEVLAVALETCGNTAENSKLLGLCSRVLKEALKPEHGDAS 60
           ++ + L  FP++LKSLV T++E+  +ALE  G      +L+ +C ++L   L  +HGD +
Sbjct: 171 LSFVHLDRFPDSLKSLVQTVSEIPLLALEHSG-VLNYDRLMEMCGKILGGVLNSDHGDMA 229

Query: 61  DTAAEVLKSLSSILFMPRSQARTFALGFVT----GLAGDDSDGVKKALVNFPRYLAKRAP 116
            TAAE+ KSL+ +L M + QAR+FALGFV+     LA D+ + +KK + N P++L  +AP
Sbjct: 230 LTAAEISKSLTPLLLMGKHQARSFALGFVSRKLMSLAKDNPE-LKKVVSNLPKFLVHKAP 288

Query: 117 EKSELRALAVDSVVEVVRVMALEDQVEFVRFVLKMGQGKQNLRLLAVDLMLNMVTTWKDP 176
           EK+E R  AV++V+E+V+ M +E Q EFV FV+KM QGK N R+LAVD++  ++++  +P
Sbjct: 289 EKAEPRGFAVEAVLEIVKAMEVEGQSEFVDFVMKMCQGKSNFRVLAVDIIPLLISSLGNP 348

Query: 177 LRVDLEEEG-NEAWGVWCLEALVKRCSDVSAVVRARALSNLAQMVGFLSREANARVALKE 235
           L     E G  ++WG+ C++ALV+RCSD SA++RARALSNLAQ+V FLS +  +R  LK+
Sbjct: 349 LGDISSENGLKDSWGLGCIDALVQRCSDTSALIRARALSNLAQVVEFLSGDERSRSILKQ 408

Query: 236 FXXXXXXXXXXXXXXXXLLRKRCVDEXXXXXXXXXXXXPNLTALLGGAIDDVLLKAMGMA 295
                            LL+KRCVDE              LT+L+GG  D  +LK MG +
Sbjct: 409 ALGFNGETSEGKGAVTDLLKKRCVDEKAAVRRAALLLVTKLTSLMGGCFDGSILKTMGTS 468

Query: 296 CSDPLVSVRKAAVAALSEVFRAFSSETVITEWLHSVPRLITDNESNIQEECENMFQELVL 355
           CSDPL+S+RKAAV+A+SE FR  + E V TEWLHSVPR+I DNE++IQEECEN+F ELVL
Sbjct: 469 CSDPLISIRKAAVSAISEAFRICTDEIVTTEWLHSVPRMIMDNETSIQEECENVFHELVL 528

Query: 356 DQIXXXXXXXXXXXXXX-XNRNVKGKFLDKEMEMLFPQGILYLLREICNGDVSPWVKKIC 414
           ++I                NRN   K LD+++E LFP+G+L LLRE+CN +VSPWV KIC
Sbjct: 529 ERILRAGNVLSPDSASLPNNRNTTSKDLDRDIEALFPEGVLVLLRELCNSEVSPWVTKIC 588

Query: 415 TSLGKKKRMNEKIVSALQNIISVSENIWLSHSMPIKKWTAPPGAWFLLSEVSAFLPNAVE 474
            SLGKKKR+  ++  ALQ II  SE++WLS SMPI +WTAP GAWFLLSEVS +L  +VE
Sbjct: 589 GSLGKKKRLKPRVALALQCIIKESESLWLSRSMPINRWTAPAGAWFLLSEVSVYLSKSVE 648

Query: 475 QGFIFHHWELFDKHEVEGELKWPSVQRNDFEEEESIECNSVAWASDRVFLLQTISNVFVE 534
             F+ HHW+L DK++V+G         ++  +E+ +ECNS  WA DRV LLQTISNV ++
Sbjct: 649 WEFLHHHWQLLDKNDVQG--------LDEQGDEQGVECNSSTWAGDRVCLLQTISNVSLQ 700

Query: 535 MPCDHAAQDPEDPAAGLSFKLIERVQEFNMHSTEVDAHLKAVKTLLKRKASNIMEEKALI 594
           +P         +PAA L+  L+++++ FN+HS EVDAH+KA+KTL K+KAS   E   L+
Sbjct: 701 LPA--------EPAADLADNLLKKIENFNLHSAEVDAHVKALKTLCKKKASTSEEADMLV 752

Query: 595 STCVDLVLPKAYEIVEKFILENSGENTESEFFTPPRSRTRKGRKSIGMGKSLLKTITAVY 654
              V+ V  KA ++ EK+I   S  N    F TP    +R+ ++   + K L K +TAVY
Sbjct: 753 KKWVEQVSLKASKVTEKYIEGVSSHN--HSFVTPATLGSRRSKRLDTVSKKLSKAVTAVY 810

Query: 655 TIGSLVIVFPSADSS-ITAYYH 675
           TIGS VI++PSAD++ I  + H
Sbjct: 811 TIGSCVIIYPSADTTKIVPFLH 832