Miyakogusa Predicted Gene

Lj6g3v1707240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1707240.1 Non Chatacterized Hit- tr|I1MGM1|I1MGM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28767
PE,70.54,0,seg,NULL; no description,Armadillo-like helical; SUBFAMILY
NOT NAMED,NULL; CONDENSIN,Condensin subun,CUFF.59814.1
         (2061 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BF177515 weakly similar to UniRef100_A7NW20 Cluster: Ch...   254   2e-66

>gnl|LJGI|BF177515 weakly similar to UniRef100_A7NW20 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 235

 Score =  254 bits (128), Expect = 2e-66
 Identities = 185/204 (90%)
 Strand = Plus / Minus

                                                                       
Query: 738 aggtggtggaatcaatggtttgctgaggaaaaggtgcgtggatgagaaggcagctgtaag 797
           ||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||| ||
Sbjct: 235 aggtggtggaatcaatggtatgctgaggagaaggtgtgtggatgagaaagcagctgtgag 176

                                                                       
Query: 798 gaaggctgcacttgttctggttcctaacttaactgctcttcttggaggtgcaattgatga 857
           |||||||||| || |||||| | ||||||||||| |||||||  | ||||| ||||||||
Sbjct: 175 gaaggctgcaattcttctggctactaacttaacttctcttctccggggtgcgattgatga 116

                                                                       
Query: 858 cgtgctgctcaaggcaatgggcatggcttgctcggatccacttgttagcgtgcggaaagc 917
            ||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 115 ggtggtgctcaaggcaatgggcatggcttgttcggatccacttgttagcatgcggaaagc 56

                                   
Query: 918 agcggttgcggctctttcggaggt 941
           |||||||||||||||||| |||||
Sbjct: 55  agcggttgcggctctttcagaggt 32