Miyakogusa Predicted Gene

Lj6g3v1693050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1693050.1 Non Characterized Hit- tr|I1L360|I1L360_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.64,5e-18,SCO1-SenC,Copper chaperone SCO1/SenC; no
description,Thioredoxin-like fold; seg,NULL;
Thioredoxin-li,gene.g66551.t1.1
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069070.1 | electron transport SCO1/SenC family protein, p...    89   1e-18
Medtr6g053740.1 | oxidoreductase/transition metal ion-binding pr...    72   2e-13

>Medtr7g069070.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr7:25419911-25424053 | 20130731
          Length = 329

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 42/51 (82%)

Query: 89  DIHNASKAVKHGPYVGKTAIGGPFHLTNHHGKHLTENDFLGKWTVMYFGFT 139
           DI N S+AVK GP  GK AIGGPF LTNHHGK +T+ DF+GKWT+MYFGFT
Sbjct: 149 DIQNVSEAVKQGPSAGKAAIGGPFELTNHHGKRVTDKDFMGKWTLMYFGFT 199


>Medtr6g053740.1 | oxidoreductase/transition metal ion-binding
           protein, putative | HC | chr6:19392109-19383729 |
           20130731
          Length = 957

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 4/58 (6%)

Query: 12  SSSTNSL-EDEVRS---YINKVKSESPISGSLFSAPGIPAPSVVSTTLHVLPGKVLVP 65
           S STNSL +D+VR+    +NK  SESP SGSLFSAPGIPAPSVVS  L V PGKVL+P
Sbjct: 376 SPSTNSLVDDQVRNENNAVNKEISESPNSGSLFSAPGIPAPSVVSAALQVPPGKVLIP 433