Miyakogusa Predicted Gene

Lj6g3v1692820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1692820.1 Non Chatacterized Hit- tr|I1M0W6|I1M0W6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,41.58,0.00000001, ,NODE_52564_length_383_cov_39.913837.path2.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36460.1                                                       127   2e-30
Glyma13g27170.1                                                        64   4e-11

>Glyma12g36460.1 
          Length = 883

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 88/120 (73%), Gaps = 6/120 (5%)

Query: 1   MQVLGPFFAKFPKLVTQSLKVVVNHDEESNKLENEKGTVMSHDEVIDLEEERTKKDASAA 60
           MQ++GP+FAK+P LV Q LKVV +HDEE+ KLEN++ T ++H  VIDLE E T+KD  A 
Sbjct: 89  MQIMGPYFAKYPILVNQLLKVVTHHDEETPKLENQQVTGLTHQSVIDLEGEYTEKDVPAV 148

Query: 61  -QLVVIIDSDEEDDRDKNSSSLPFNEVMLPNSLQ-SPALRMMGYRAPIAYHGESEDLKFE 118
              VVIIDSDEEDDRDK  S +PF+EV+LP  +  SPAL+++GY     Y GES DLK E
Sbjct: 149 PNTVVIIDSDEEDDRDKK-SVIPFHEVVLPRKVAPSPALKVIGYH---TYLGESNDLKIE 204


>Glyma13g27170.1 
          Length = 824

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 24/101 (23%)

Query: 1   MQVLGPFFAKFPKLVTQSLKVVVNHDEESNKLENEKGTVMSHDEVIDLEE---------- 50
           M+VLGP+ AK+PKL  Q +  V++ DEE  K E+++ T ++H  VIDLE           
Sbjct: 19  MKVLGPYLAKYPKL-NQLIHAVIDRDEEILKSEDQQVTGLTHQNVIDLETPKLEVQQITG 77

Query: 51  -----------ERTKKDASAAQL--VVIIDSDEEDDRDKNS 78
                      E T+KD  AAQ+  ++ IDSDEEDD DK S
Sbjct: 78  LTLQNVIDLEGENTEKDVHAAQIHGLIHIDSDEEDDGDKKS 118