Miyakogusa Predicted Gene

Lj6g3v1589740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1589740.1 Non Chatacterized Hit- tr|C0PD23|C0PD23_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,57.83,2e-19,seg,NULL,CUFF.59639.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g14430.1                                                       122   8e-29
Glyma09g03490.3                                                       120   3e-28
Glyma09g03490.2                                                       120   3e-28
Glyma09g03490.1                                                       120   3e-28
Glyma05g30410.1                                                       112   9e-26
Glyma08g13540.1                                                       108   2e-24

>Glyma15g14430.1 
          Length = 157

 Score =  122 bits (306), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 65/88 (73%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF R+RSQPR+T +MSLGGMDYVDPKRKGN  GKVFL A LTALCI++IK+       
Sbjct: 1  MLNFNRTRSQPRSTRSMSLGGMDYVDPKRKGNFVGKVFLAAALTALCIIMIKRSPSLNPP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHACF 88
                  GVTHVLVTGGAGYIGSHA  
Sbjct: 61 SPFSIREPGVTHVLVTGGAGYIGSHATL 88


>Glyma09g03490.3 
          Length = 415

 Score =  120 bits (301), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/86 (68%), Positives = 63/86 (73%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF R RSQPR T +MSLGGMDYVDPKRKGN  GKVFL A LTALCI++IK+       
Sbjct: 1  MLNFNRIRSQPRTTRSMSLGGMDYVDPKRKGNFVGKVFLAAALTALCIIMIKRSPSLNPP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHA 86
                  GVTHVLVTGGAGYIGSHA
Sbjct: 61 SPFSIHEPGVTHVLVTGGAGYIGSHA 86


>Glyma09g03490.2 
          Length = 414

 Score =  120 bits (301), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/86 (68%), Positives = 63/86 (73%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF R RSQPR T +MSLGGMDYVDPKRKGN  GKVFL A LTALCI++IK+       
Sbjct: 1  MLNFNRIRSQPRTTRSMSLGGMDYVDPKRKGNFVGKVFLAAALTALCIIMIKRSPSLNPP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHA 86
                  GVTHVLVTGGAGYIGSHA
Sbjct: 61 SPFSIHEPGVTHVLVTGGAGYIGSHA 86


>Glyma09g03490.1 
          Length = 415

 Score =  120 bits (301), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/86 (68%), Positives = 63/86 (73%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF R RSQPR T +MSLGGMDYVDPKRKGN  GKVFL A LTALCI++IK+       
Sbjct: 1  MLNFNRIRSQPRTTRSMSLGGMDYVDPKRKGNFVGKVFLAAALTALCIIMIKRSPSLNPP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHA 86
                  GVTHVLVTGGAGYIGSHA
Sbjct: 61 SPFSIHEPGVTHVLVTGGAGYIGSHA 86


>Glyma05g30410.1 
          Length = 416

 Score =  112 bits (280), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/86 (62%), Positives = 60/86 (69%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF RSR+Q RA  A ++GGMDY DPKRKGN  GKVFL A LT LCI++IK+       
Sbjct: 1  MLNFGRSRNQSRAARATTMGGMDYADPKRKGNFVGKVFLAAALTTLCIIMIKQSPSLNSP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHA 86
                  GVTHVLVTGGAGYIGSHA
Sbjct: 61 SPFAVHEPGVTHVLVTGGAGYIGSHA 86


>Glyma08g13540.1 
          Length = 416

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 59/88 (67%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF RSRSQ RA  A ++GGMDY D K+KGN  GKVFL A LT LCI++IK+       
Sbjct: 1  MLNFGRSRSQSRAARATTMGGMDYADSKKKGNFVGKVFLAAALTTLCIIMIKRSPSLNSP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHACF 88
                  GVTHVLVTGGAGYIGSHA  
Sbjct: 61 SPFSVREPGVTHVLVTGGAGYIGSHAAL 88