Miyakogusa Predicted Gene

Lj6g3v1589740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1589740.1 Non Characterized Hit- tr|C0PD23|C0PD23_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,57.83,2e-19,seg,NULL,CUFF.59639.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g032100.2 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC...   124   2e-29
Medtr2g032100.1 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC...   124   2e-29
Medtr8g089180.3 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC...   105   7e-24
Medtr8g089180.1 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC...   105   7e-24
Medtr8g089180.2 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC...   105   7e-24

>Medtr2g032100.2 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC
          | chr2:12211709-12216119 | 20130731
          Length = 301

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 67/87 (77%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF+R+RSQPRA  +MSLGGMDYVDPK+KGN+ GKVFLVA LTALCIL+IK+       
Sbjct: 1  MLNFSRARSQPRAARSMSLGGMDYVDPKKKGNLLGKVFLVAALTALCILVIKRSPSFTTP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHAC 87
                  GVTHVLVTGGAGYIGSHA 
Sbjct: 61 SPFSVHEPGVTHVLVTGGAGYIGSHAT 87


>Medtr2g032100.1 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC
          | chr2:12211618-12216866 | 20130731
          Length = 412

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 67/88 (76%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLNF+R+RSQPRA  +MSLGGMDYVDPK+KGN+ GKVFLVA LTALCIL+IK+       
Sbjct: 1  MLNFSRARSQPRAARSMSLGGMDYVDPKKKGNLLGKVFLVAALTALCILVIKRSPSFTTP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHACF 88
                  GVTHVLVTGGAGYIGSHA  
Sbjct: 61 SPFSVHEPGVTHVLVTGGAGYIGSHATL 88


>Medtr8g089180.3 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC
          | chr8:37047962-37052648 | 20130731
          Length = 415

 Score =  105 bits (263), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 59/88 (67%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLN  RSR+Q R T   ++G M+Y DPK+KGN  GK+FL A LT+LCI++IK+       
Sbjct: 1  MLNLVRSRTQARTTRPTTMGSMEYADPKKKGNFVGKIFLAAALTSLCIIMIKRSPSLKSP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHACF 88
                  GVTHVLVTGGAGYIGSHA F
Sbjct: 61 SPFAFHEPGVTHVLVTGGAGYIGSHAAF 88


>Medtr8g089180.1 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC
          | chr8:37048599-37052524 | 20130731
          Length = 415

 Score =  105 bits (263), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 59/88 (67%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLN  RSR+Q R T   ++G M+Y DPK+KGN  GK+FL A LT+LCI++IK+       
Sbjct: 1  MLNLVRSRTQARTTRPTTMGSMEYADPKKKGNFVGKIFLAAALTSLCIIMIKRSPSLKSP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHACF 88
                  GVTHVLVTGGAGYIGSHA F
Sbjct: 61 SPFAFHEPGVTHVLVTGGAGYIGSHAAF 88


>Medtr8g089180.2 | UDP-D-glucose/UDP-D-galactose 4-epimerase | HC
          | chr8:37047905-37052666 | 20130731
          Length = 415

 Score =  105 bits (263), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 59/88 (67%)

Query: 1  MLNFARSRSQPRATSAMSLGGMDYVDPKRKGNVAGKVFLVAVLTALCILIIKKXXXXXXX 60
          MLN  RSR+Q R T   ++G M+Y DPK+KGN  GK+FL A LT+LCI++IK+       
Sbjct: 1  MLNLVRSRTQARTTRPTTMGSMEYADPKKKGNFVGKIFLAAALTSLCIIMIKRSPSLKSP 60

Query: 61 XXXXXXXXGVTHVLVTGGAGYIGSHACF 88
                  GVTHVLVTGGAGYIGSHA F
Sbjct: 61 SPFAFHEPGVTHVLVTGGAGYIGSHAAF 88