Miyakogusa Predicted Gene
- Lj6g3v1589740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1589740.1 Non Chatacterized Hit- tr|C0PD23|C0PD23_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,57.83,2e-19,seg,NULL,CUFF.59639.1
(279 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79413 similar to UniRef100_A7Q4U6 Cluster: Chromosome... 486 e-137
gnl|LJGI|TC59548 similar to UniRef100_A7Q4U6 Cluster: Chromosome... 486 e-137
gnl|LJGI|TC59202 similar to UniRef100_A7Q4U6 Cluster: Chromosome... 404 e-112
gnl|LJGI|TC67550 similar to UniRef100_A7Q4U6 Cluster: Chromosome... 147 4e-35
gnl|LJGI|DC597719 weakly similar to UniRef100_A7R0M4 Cluster: Ch... 96 1e-19
>gnl|LJGI|TC79413 similar to UniRef100_A7Q4U6 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 763
Score = 486 bits (245), Expect = e-137
Identities = 254/257 (98%)
Strand = Plus / Plus
Query: 1 atgctcaattttgccaggtccagaagtcagccgagggcaactagtgctatgtcattagga 60
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 225 atgctaaattttgccaggtccagaagtcagccgagggcaactagagctatgtcattagga 284
Query: 61 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 344
Query: 121 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 404
Query: 181 agtccgttttctgtctctgaaccaggggtcactcatgtattagtgacaggaggtgcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agtccgttttctgtctctgaaccaggggtcactcatgtattagtgacaggaggtgcaggc 464
Query: 241 tacatcggctcacatgc 257
|||| ||||||||||||
Sbjct: 465 tacagcggctcacatgc 481
>gnl|LJGI|TC59548 similar to UniRef100_A7Q4U6 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 761
Score = 486 bits (245), Expect = e-137
Identities = 254/257 (98%)
Strand = Plus / Plus
Query: 1 atgctcaattttgccaggtccagaagtcagccgagggcaactagtgctatgtcattagga 60
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 197 atgctaaattttgccaggtccagaagtcagccgagggcaactagagctatgtcattagga 256
Query: 61 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 316
Query: 121 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 376
Query: 181 agtccgttttctgtctctgaaccaggggtcactcatgtattagtgacaggaggtgcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 377 agtccgttttctgtctctgaaccaggggtcactcatgtattagtgacaggaggcgcaggc 436
Query: 241 tacatcggctcacatgc 257
|||||||||||||||||
Sbjct: 437 tacatcggctcacatgc 453
>gnl|LJGI|TC59202 similar to UniRef100_A7Q4U6 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (92%)
Length = 1686
Score = 404 bits (204), Expect = e-112
Identities = 210/212 (99%)
Strand = Plus / Plus
Query: 1 atgctcaattttgccaggtccagaagtcagccgagggcaactagtgctatgtcattagga 60
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 195 atgctaaattttgccaggtccagaagtcagccgagggcaactagagctatgtcattagga 254
Query: 61 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 314
Query: 121 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 374
Query: 181 agtccgttttctgtctctgaaccaggggtcac 212
||||||||||||||||||||||||||||||||
Sbjct: 375 agtccgttttctgtctctgaaccaggggtcac 406
>gnl|LJGI|TC67550 similar to UniRef100_A7Q4U6 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 678
Score = 147 bits (74), Expect = 4e-35
Identities = 209/254 (82%)
Strand = Plus / Plus
Query: 1 atgctcaattttgccaggtccagaagtcagccgagggcaactagtgctatgtcattagga 60
||||| ||||||| ||||||||||||||| | ||||||||||| ||| || | |||
Sbjct: 222 atgctaaattttgtcaggtccagaagtcaagcaagggcaactagacctacaacaatggga 281
Query: 61 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 120
||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||| | |
Sbjct: 282 agcatggattatgtggatcaaaaaaggaagggcaactttgttggaaaagtttttcttgct 341
Query: 121 gcagtattaacggcattatgcattttgataatcaagaaatctccatcttttacttctcct 180
|||| ||||||| | ||||||| | || |||| || |||||||||| | | ||| ||
Sbjct: 342 gcagcattaacgactctatgcataatcatgatcaggagatctccatctctgaattccccc 401
Query: 181 agtccgttttctgtctctgaaccaggggtcactcatgtattagtgacaggaggtgcaggc 240
||||||||||| ||| |||||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 402 agtccgttttccgtccatgaacccggggtcactcatgttttagtaacagggggtgcaggc 461
Query: 241 tacatcggctcaca 254
| || ||||||||
Sbjct: 462 tttattggctcaca 475
>gnl|LJGI|DC597719 weakly similar to UniRef100_A7R0M4 Cluster: Chromosome chr10
scaffold_312, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_312, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 568
Score = 95.6 bits (48), Expect = 1e-19
Identities = 111/132 (84%)
Strand = Plus / Plus
Query: 1 atgctcaattttgccaggtccagaagtcagccgagggcaactagtgctatgtcattagga 60
||||| ||||||| ||||||||||||||| | ||||||||||| ||| || | |||
Sbjct: 253 atgctaaattttgtcaggtccagaagtcaagcaagggcaactagacctacaacaatggga 312
Query: 61 ggcatggactatgtggatccaaaaaggaagggcaatgttgctggaaaagtttttctcgtt 120
||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||| | |
Sbjct: 313 agcatggattatgtggatcaaaaaaggaagggcaactttgttggaaaagtttttcttgct 372
Query: 121 gcagtattaacg 132
|||| |||||||
Sbjct: 373 gcagcattaacg 384