Miyakogusa Predicted Gene

Lj6g3v1525960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1525960.1 CUFF.59580.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034880.1 | transmembrane protein, putative | HC | chr2:13...   417   e-117
Medtr2g034880.3 | transmembrane protein, putative | HC | chr2:13...   417   e-117
Medtr2g034880.4 | transmembrane protein, putative | HC | chr2:13...   363   e-100
Medtr2g034880.2 | transmembrane protein, putative | HC | chr2:13...   363   e-100
Medtr2g034890.1 | transmembrane protein, putative | HC | chr2:13...   330   1e-90

>Medtr2g034880.1 | transmembrane protein, putative | HC |
           chr2:13393012-13395215 | 20130731
          Length = 264

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/266 (78%), Positives = 224/266 (84%), Gaps = 5/266 (1%)

Query: 1   MAVTHADLEPSRGKTDLSSKTGAXXXXXXXXXXXXXXXXXXXAEATRSEVTWVNTGGKEK 60
           MAVTHADLEP R KTDLSSKTGA                   AEATRSEVTW+NT GKEK
Sbjct: 1   MAVTHADLEPKRSKTDLSSKTGAFLMVFTILLGLLCFILCLIAEATRSEVTWMNTNGKEK 60

Query: 61  GAKSECVYDGNGKVPLLCAASAFIGLAIAMVVEHTYMLIAVSKSKPSLLNWDPDSPSAKS 120
           G KSECVY+ NGKVPLLCAASAF+GLAIA+V+EHTYMLIAVSKS PSL+NWDPDSPSAKS
Sbjct: 61  GTKSECVYNSNGKVPLLCAASAFVGLAIALVMEHTYMLIAVSKSSPSLINWDPDSPSAKS 120

Query: 121 LIWQAGFFFITTWICFAVAEILLLAALSVESGHLKNWYKPKTICYSIREGLFASAGVFAL 180
           L W AGFFFI TWICFAVAEILLLA LSVESGHLKNW KP+T CY+IREGLF++AGVFAL
Sbjct: 121 LTWLAGFFFIATWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYTIREGLFSAAGVFAL 180

Query: 181 TTVFLAAGLYLTALRTQRMLEELAIVRREVLETSSFYSSPPRSP--QRHIAAVARENPTT 238
           TTVFLAAGLYLTALR QRM EELAIVRREVLE S+FY+SPPRSP  QRHI+ VARENPTT
Sbjct: 181 TTVFLAAGLYLTALRAQRMSEELAIVRREVLEASTFYASPPRSPQSQRHISTVARENPTT 240

Query: 239 TTRESQNE-LLLSVFPTPFNKSYNFV 263
              ESQN+ LLLSVFPTPFNK+Y FV
Sbjct: 241 I--ESQNDNLLLSVFPTPFNKTYTFV 264


>Medtr2g034880.3 | transmembrane protein, putative | HC |
           chr2:13393012-13395215 | 20130731
          Length = 264

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/266 (78%), Positives = 224/266 (84%), Gaps = 5/266 (1%)

Query: 1   MAVTHADLEPSRGKTDLSSKTGAXXXXXXXXXXXXXXXXXXXAEATRSEVTWVNTGGKEK 60
           MAVTHADLEP R KTDLSSKTGA                   AEATRSEVTW+NT GKEK
Sbjct: 1   MAVTHADLEPKRSKTDLSSKTGAFLMVFTILLGLLCFILCLIAEATRSEVTWMNTNGKEK 60

Query: 61  GAKSECVYDGNGKVPLLCAASAFIGLAIAMVVEHTYMLIAVSKSKPSLLNWDPDSPSAKS 120
           G KSECVY+ NGKVPLLCAASAF+GLAIA+V+EHTYMLIAVSKS PSL+NWDPDSPSAKS
Sbjct: 61  GTKSECVYNSNGKVPLLCAASAFVGLAIALVMEHTYMLIAVSKSSPSLINWDPDSPSAKS 120

Query: 121 LIWQAGFFFITTWICFAVAEILLLAALSVESGHLKNWYKPKTICYSIREGLFASAGVFAL 180
           L W AGFFFI TWICFAVAEILLLA LSVESGHLKNW KP+T CY+IREGLF++AGVFAL
Sbjct: 121 LTWLAGFFFIATWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYTIREGLFSAAGVFAL 180

Query: 181 TTVFLAAGLYLTALRTQRMLEELAIVRREVLETSSFYSSPPRSP--QRHIAAVARENPTT 238
           TTVFLAAGLYLTALR QRM EELAIVRREVLE S+FY+SPPRSP  QRHI+ VARENPTT
Sbjct: 181 TTVFLAAGLYLTALRAQRMSEELAIVRREVLEASTFYASPPRSPQSQRHISTVARENPTT 240

Query: 239 TTRESQNE-LLLSVFPTPFNKSYNFV 263
              ESQN+ LLLSVFPTPFNK+Y FV
Sbjct: 241 I--ESQNDNLLLSVFPTPFNKTYTFV 264


>Medtr2g034880.4 | transmembrane protein, putative | HC |
           chr2:13393012-13395215 | 20130731
          Length = 212

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/214 (83%), Positives = 193/214 (90%), Gaps = 5/214 (2%)

Query: 53  VNTGGKEKGAKSECVYDGNGKVPLLCAASAFIGLAIAMVVEHTYMLIAVSKSKPSLLNWD 112
           +NT GKEKG KSECVY+ NGKVPLLCAASAF+GLAIA+V+EHTYMLIAVSKS PSL+NWD
Sbjct: 1   MNTNGKEKGTKSECVYNSNGKVPLLCAASAFVGLAIALVMEHTYMLIAVSKSSPSLINWD 60

Query: 113 PDSPSAKSLIWQAGFFFITTWICFAVAEILLLAALSVESGHLKNWYKPKTICYSIREGLF 172
           PDSPSAKSL W AGFFFI TWICFAVAEILLLA LSVESGHLKNW KP+T CY+IREGLF
Sbjct: 61  PDSPSAKSLTWLAGFFFIATWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYTIREGLF 120

Query: 173 ASAGVFALTTVFLAAGLYLTALRTQRMLEELAIVRREVLETSSFYSSPPRSP--QRHIAA 230
           ++AGVFALTTVFLAAGLYLTALR QRM EELAIVRREVLE S+FY+SPPRSP  QRHI+ 
Sbjct: 121 SAAGVFALTTVFLAAGLYLTALRAQRMSEELAIVRREVLEASTFYASPPRSPQSQRHIST 180

Query: 231 VARENPTTTTRESQNE-LLLSVFPTPFNKSYNFV 263
           VARENPTT   ESQN+ LLLSVFPTPFNK+Y FV
Sbjct: 181 VARENPTTI--ESQNDNLLLSVFPTPFNKTYTFV 212


>Medtr2g034880.2 | transmembrane protein, putative | HC |
           chr2:13393012-13395215 | 20130731
          Length = 212

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/214 (83%), Positives = 193/214 (90%), Gaps = 5/214 (2%)

Query: 53  VNTGGKEKGAKSECVYDGNGKVPLLCAASAFIGLAIAMVVEHTYMLIAVSKSKPSLLNWD 112
           +NT GKEKG KSECVY+ NGKVPLLCAASAF+GLAIA+V+EHTYMLIAVSKS PSL+NWD
Sbjct: 1   MNTNGKEKGTKSECVYNSNGKVPLLCAASAFVGLAIALVMEHTYMLIAVSKSSPSLINWD 60

Query: 113 PDSPSAKSLIWQAGFFFITTWICFAVAEILLLAALSVESGHLKNWYKPKTICYSIREGLF 172
           PDSPSAKSL W AGFFFI TWICFAVAEILLLA LSVESGHLKNW KP+T CY+IREGLF
Sbjct: 61  PDSPSAKSLTWLAGFFFIATWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYTIREGLF 120

Query: 173 ASAGVFALTTVFLAAGLYLTALRTQRMLEELAIVRREVLETSSFYSSPPRSP--QRHIAA 230
           ++AGVFALTTVFLAAGLYLTALR QRM EELAIVRREVLE S+FY+SPPRSP  QRHI+ 
Sbjct: 121 SAAGVFALTTVFLAAGLYLTALRAQRMSEELAIVRREVLEASTFYASPPRSPQSQRHIST 180

Query: 231 VARENPTTTTRESQNE-LLLSVFPTPFNKSYNFV 263
           VARENPTT   ESQN+ LLLSVFPTPFNK+Y FV
Sbjct: 181 VARENPTTI--ESQNDNLLLSVFPTPFNKTYTFV 212


>Medtr2g034890.1 | transmembrane protein, putative | HC |
           chr2:13396579-13398217 | 20130731
          Length = 243

 Score =  330 bits (845), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 167/239 (69%), Positives = 187/239 (78%), Gaps = 3/239 (1%)

Query: 1   MAVTHADLEPSRGKTDLSSKTGAXXXXXXXXXXXXXXXXXXXAEATRSEVTWV-NTGGKE 59
           MAVTHADLEP + KTDLSSKT                     AE TRS+VTW+ N  GK+
Sbjct: 1   MAVTHADLEP-KSKTDLSSKT-VVFLVITIILGLFTFILCLKAEVTRSQVTWIMNKDGKD 58

Query: 60  KGAKSECVYDGNGKVPLLCAASAFIGLAIAMVVEHTYMLIAVSKSKPSLLNWDPDSPSAK 119
           KG K EC Y+GNGKVPLLC+A AF+GLAIA+V+EH YMLIAVSKS PSLL+WD DS S K
Sbjct: 59  KGDKYECAYNGNGKVPLLCSACAFVGLAIALVMEHIYMLIAVSKSPPSLLDWDNDSSSVK 118

Query: 120 SLIWQAGFFFITTWICFAVAEILLLAALSVESGHLKNWYKPKTICYSIREGLFASAGVFA 179
           SLI  AGFF+ITTWICFAVAEILLLA LSVESGHLKNW KP+T CY+IREGLF++AGVFA
Sbjct: 119 SLISLAGFFYITTWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYAIREGLFSAAGVFA 178

Query: 180 LTTVFLAAGLYLTALRTQRMLEELAIVRREVLETSSFYSSPPRSPQRHIAAVARENPTT 238
           LTTVF+AAGLYLT LR QRM E +A V REVLE S+F++ PPRSPQRHI  VARENP T
Sbjct: 179 LTTVFIAAGLYLTILRAQRMSEVVATVGREVLEASNFFAFPPRSPQRHITTVARENPKT 237