Miyakogusa Predicted Gene

Lj6g3v1463940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1463940.1 Non Chatacterized Hit- tr|C5YFR4|C5YFR4_SORBI
Putative uncharacterized protein Sb06g015250
OS=Sorghu,46.43,4e-17,seg,NULL,CUFF.59664.1
         (386 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g03050.1                                                       187   1e-47
Glyma15g16000.1                                                       164   2e-40
Glyma07g37600.1                                                       158   1e-38
Glyma09g04850.1                                                       123   3e-28
Glyma14g16710.1                                                        72   7e-13

>Glyma17g03050.1 
          Length = 365

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/412 (35%), Positives = 177/412 (42%), Gaps = 97/412 (23%)

Query: 21  NGTQCINHPHRNSPGGICAFCLQEKLGKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 80
           +G QC +HP+RN+PGGICAFCLQ+KL                                  
Sbjct: 3   DGMQCSDHPYRNNPGGICAFCLQDKLAPAPSSSTAV------------------------ 38

Query: 81  XXXXXXXXXXXQKNHSHHDHVHA---SRLPFLLAXXXXXXXXXXXXXXXXDVVFKRSKST 137
                          SH +H +    +RLPFLL                 +++ KRSKST
Sbjct: 39  ---------------SHFNHPYYPRRTRLPFLLPKKKSKKPTSAPTSD--NILLKRSKST 81

Query: 138 ATPRMGKFLNEE----------DFSPRKKNKFWXXXXXXXXXXXXXXXXXXEAKSFSNSN 187
           ATPR  + L ++           FSPRK+N FW                       +N N
Sbjct: 82  ATPRRNRSLVDDDDNDDDLVIGPFSPRKRNGFWSFLYLSSKSSKKLNSKSFRD---NNIN 138

Query: 188 GSPRISTL----------KHKDKNNFGSSLGRKXXXXXXXXXXXXXXXXXNGHSSSLDRK 237
            +PRIS++          K K+K   GSSL                       +SS +RK
Sbjct: 139 NTPRISSINLAPASTSSAKLKEKCCSGSSL---KTDIVVEQDNNNSNSPNTASASSFERK 195

Query: 238 VXXXXXXXXXXXXXXXDFFERISTGLGDCTLRRVESQREGSKSKVGSAS----------- 286
           V               DFFERISTG GDCTLRRVESQREG     G  +           
Sbjct: 196 VSRSKSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKPKGTGGGASAAVSRAGEQH 255

Query: 287 --HGMKERVRCGGLFGGFMMMTXXXXXXXXXXXXXXXXXXADD--GINGDS----LSHGK 338
             H +KERVRCGGLF GFMM +                  ADD   +NG S    LSH +
Sbjct: 256 HHHCIKERVRCGGLFSGFMMTS---SSSSSSSSSYWVSSSADDAAAVNGKSATVALSHNR 312

Query: 339 GRSWGWTLASPMRAFSSKNSSKDNKRGSSV-----KNPTPNLSAIPSLLTVR 385
           GRSWGW  ASPMRAFS K SSK++ R   +     KN TPNLSAIPSLL VR
Sbjct: 313 GRSWGWAFASPMRAFSGKPSSKESNRRDIIRDANDKNATPNLSAIPSLLAVR 364


>Glyma15g16000.1 
          Length = 337

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/377 (37%), Positives = 169/377 (44%), Gaps = 72/377 (19%)

Query: 21  NGTQCINHPHRNSP---GGICAFCLQEKLGKLVXXXXXXXXXXXXXXXXXXXXXXXXXXX 77
           +G QC+NHPH NS    GGICAFCLQ+KL                               
Sbjct: 20  DGMQCMNHPHNNSNNNPGGICAFCLQDKL--------------------RNLLSSSPPLS 59

Query: 78  XXXXXXXXXXXXXXQKNHSHHDHVHASRLPFLLAXXXXXX--XXXXXXXXXXDVVFKRSK 135
                             + HDH   SRLPFL+                   +++FKRSK
Sbjct: 60  SSSSPSPSFTPPPPPSVKTDHDHNTRSRLPFLVPKKNNNKKPSSYTNISSSANIIFKRSK 119

Query: 136 STATPRMGKFLNEEDFSPRKKNKFWXXXXXXXXXXXXXXXXXXEAKSFSNSNGSPRISTL 195
           STATP+  +FL E+DFSPRK+N FW                  EAKSF   NG  R    
Sbjct: 120 STATPKRNQFLEEKDFSPRKRNGFWSFLYPSSSK---------EAKSFG-PNGKYR---- 165

Query: 196 KHKDKNNFGSSLGRKXXXXXXXXXXXXXXXXXNGHSSSLDRKVXXXXXXXXXXXXXXXDF 255
                   G  LG+K                    SSS   KV               DF
Sbjct: 166 --------GKCLGKKSDHVIIVEEDKCLS-----SSSSSSSKVSRSRSVGCGSRSFSSDF 212

Query: 256 FERISTGLGDCTLRRVESQREGSKSKVGSAS----HGMKERVRCGGLFGGFMMMTXXXXX 311
           FERIS+GLGDCTLRRVESQREG K K+ +++    H MKERVRCGG+F GF+M       
Sbjct: 213 FERISSGLGDCTLRRVESQREGGKPKLAASANTMNHCMKERVRCGGIFSGFVM----NSS 268

Query: 312 XXXXXXXXXXXXXADDGINGDSLSHGKGRSWGWTLASPMRAFSSK--NSSKDNKRGSSVK 369
                         DD         G+GRSWGW  ASPMRAF++K    S  +KR +S K
Sbjct: 269 SSTTSSSSWVSSSVDD---------GRGRSWGWAFASPMRAFTTKGSPPSSSSKRDASDK 319

Query: 370 -NPTPNLSAIPSLLTVR 385
            N TPNLSAIP+LLTVR
Sbjct: 320 NNATPNLSAIPTLLTVR 336


>Glyma07g37600.1 
          Length = 420

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/302 (42%), Positives = 142/302 (47%), Gaps = 53/302 (17%)

Query: 128 DVVFKRSKSTATPRMGKFLNEED----------FSPRKKNKFWXXXXXXXXXXXXXXXXX 177
           ++V KRSKSTATPR    L  +D          FSPRK+N FW                 
Sbjct: 127 NIVLKRSKSTATPRRNHSLVVDDDDDDEFAIGGFSPRKRNGFWSFLYLSSKSSKKL---- 182

Query: 178 XEAKSFSNSNGSPRISTL----------KHKDKNNFGSSLGRKXXXXXXXXXXXXXXXXX 227
             +KSF + N  PRIST+          K KDK   GSSL                    
Sbjct: 183 -NSKSFRDHN-PPRISTINSAPGSSSSVKLKDKRCSGSSL---KTDIVVEQDNTNSPNTA 237

Query: 228 NGHSSSLDRKVXXXXXXXXXXXXXXXDFFERISTGLGDCTLRRVESQREGSKSKVGSASH 287
           +  +SS +RKV               DFFERISTG GDCTLRRVESQREG    +G  S 
Sbjct: 238 SASASSFERKVSRSRSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKPKGIGGGSS 297

Query: 288 G-------------MKERVRCGGLFGGFMMM--TXXXXXXXXXXXXXXXXXXADDGINGD 332
                         MKERVRCGGLF GFMM   +                  A   +NG 
Sbjct: 298 AVSRGGEHHHHHHCMKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAAAAAVNGK 357

Query: 333 S----LSHGKGRSWGWTLASPMRAFSSKNSSK-----DNKRGSSVKNPTPNLSAIPSLLT 383
           S    LSH +GRSWGW  ASPMRAFS K SSK     D  RG+S KN TPNLSAIPSLL 
Sbjct: 358 SATVALSHNRGRSWGWAFASPMRAFSGKPSSKESNRRDIIRGASDKNATPNLSAIPSLLA 417

Query: 384 VR 385
           VR
Sbjct: 418 VR 419



 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 28/30 (93%)

Query: 21 NGTQCINHPHRNSPGGICAFCLQEKLGKLV 50
          +G QC +HP+RN+PGGICAFCLQ+KLGKLV
Sbjct: 19 DGMQCSDHPYRNNPGGICAFCLQDKLGKLV 48


>Glyma09g04850.1 
          Length = 325

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 85/134 (63%), Gaps = 11/134 (8%)

Query: 254 DFFERISTGLGDCTLRRVESQREGSKSKV--GSASHGMKERVRCGGLFGGFMMMTXXXXX 311
           DFF+RIS+GL DCTLRRVESQREG K KV   + +H MKERVRCGG+F GF+M +     
Sbjct: 200 DFFDRISSGLSDCTLRRVESQREGGKPKVIANTMNHCMKERVRCGGIFSGFVMTSSSSTT 259

Query: 312 XXXXXXXXXXXXXADDGINGDSLSHGKGRSWGWTLASPMRAFSSKNSSKDNKRGSSVKNP 371
                        +       S+  G+GRSWGW  ASPM+AF++K SSK  +  S   N 
Sbjct: 260 SSSSSSSSSSWVSS-------SVDDGRGRSWGWAFASPMKAFTTKGSSK--RDASDKNND 310

Query: 372 TPNLSAIPSLLTVR 385
           T NLSAIPSLLTVR
Sbjct: 311 THNLSAIPSLLTVR 324



 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 21/147 (14%)

Query: 21  NGTQCINHPHRNS----PGGICAFCLQEKLGKLVXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           +G QC+NHPHRN+    PGGICA CLQ+KL  L+                          
Sbjct: 13  DGMQCMNHPHRNNNNNNPGGICALCLQDKLRNLLSSSFPTSSPPFSSSSSSSPSFTSSSS 72

Query: 77  XXXXXXXXXXXXXXXQKNHSH-HDHVHASRLPFLLAXXXXXXXXXXXXXXXXDVVFKRSK 135
                          + +H H +DH   SRLPFL+                 +++FKRSK
Sbjct: 73  V--------------KTDHDHDYDHYTRSRLPFLVPKKNIIINNKKPSSISTNIIFKRSK 118

Query: 136 STATPRMG--KFLNEEDFSPRKKNKFW 160
           STATPR    +FL EEDFSPRK+N FW
Sbjct: 119 STATPRRNNNQFLEEEDFSPRKRNGFW 145


>Glyma14g16710.1 
          Length = 206

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 79/196 (40%), Gaps = 45/196 (22%)

Query: 128 DVVFKRSKSTATPRMGKFLNEED-------FSPRKKNKFWXXXXXXXXXXXXXXXXXXEA 180
           ++V K SKST T R    L   D       FSP+K+N F                    +
Sbjct: 24  NIVLKCSKSTTTLRRNHSLINNDNDLVIGGFSPKKRNIFLVFSLSLFQIIQKL-----NS 78

Query: 181 KSFSNSNGSPRISTLKHKDKNNFGSSLGRKXXXXXXXXXXXXXXXXXNGHSSSLDRKVXX 240
           KSF ++N +PRIST+     NN  S                         +SS + KV  
Sbjct: 79  KSFRDNN-TPRISTINSASGNNTNSP--------------------NTTSASSFECKVLR 117

Query: 241 XXXXXXXXXXXXXDFFERISTGLGDCTLRRVESQREGSKSKVGSAS------------HG 288
                        DFF+RIST  GDCTLR VESQ EG   + G  S            H 
Sbjct: 118 SRFVGCGSRSFSRDFFKRISTRFGDCTLRSVESQHEGKPKRTGGGSSAVSNDDEHHHHHC 177

Query: 289 MKERVRCGGLFGGFMM 304
           MKERV  G LF GFMM
Sbjct: 178 MKERVTYGRLFSGFMM 193