Miyakogusa Predicted Gene

Lj6g3v1463940.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1463940.1 Non Chatacterized Hit- tr|C5YFR4|C5YFR4_SORBI
Putative uncharacterized protein Sb06g015250
OS=Sorghu,46.43,4e-17,seg,NULL,CUFF.59664.1
         (1162 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338840 similar to UniRef100_A7Q8D5 Cluster: Chromosom...   349   2e-95
gnl|LJGI|TC80124 similar to UniRef100_A7Q8D5 Cluster: Chromosome...   224   1e-57
gnl|LJGI|TC74571 similar to UniRef100_A7Q8D5 Cluster: Chromosome...    92   9e-18
gnl|LJGI|TC69169 homologue to UniRef100_A7Q8D5 Cluster: Chromoso...    54   2e-06

>gnl|LJGI|FS338840 similar to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_64, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 749

 Score =  349 bits (176), Expect = 2e-95
 Identities = 176/176 (100%)
 Strand = Plus / Plus

                                                                       
Query: 268 gcccctcagaaaaaccatagccaccatgatcatgttcatgcctcacgcctcccttttctg 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gcccctcagaaaaaccatagccaccatgatcatgttcatgcctcacgcctcccttttctg 633

                                                                       
Query: 328 ttagctaagaagaagaagaaaccctgttctaataacccttcttcttcaacctctgatgtt 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttagctaagaagaagaagaaaccctgttctaataacccttcttcttcaacctctgatgtt 693

                                                                   
Query: 388 gttttcaagcgcagcaaatccactgcaactcctagaatgggaaagtttctcaatga 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gttttcaagcgcagcaaatccactgcaactcctagaatgggaaagtttctcaatga 749



 Score =  293 bits (148), Expect = 1e-78
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaggaatcaaaggaggtggaaaggttggtgtaggtgaagggtttgaagtgtttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atggaaggaatcaaaggaggtggaaaggttggtgtaggtgaagggtttgaagtgtttgat 366

                                                                       
Query: 61  aatggaactcaatgcatcaaccatcctcacagaaacagccctggtgggatctgtgctttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aatggaactcaatgcatcaaccatcctcacagaaacagccctggtgggatctgtgctttt 426

                                       
Query: 121 tgcctccaagaaaagcttggtaaacttg 148
           ||||||||||||||||||||||||||||
Sbjct: 427 tgcctccaagaaaagcttggtaaacttg 454



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 214 agatcccaccacactgctgctacttca 240
           |||||||||||||||||||||||||||
Sbjct: 520 agatcccaccacactgctgctacttca 546


>gnl|LJGI|TC80124 similar to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_64, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 524

 Score =  224 bits (113), Expect = 1e-57
 Identities = 122/125 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1038 tgctagtcccatgagagcttttagcagcaaaaactcttccaaggacaacaagaggggttc 1097
            ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct: 1    tgctagtcccatgagagcttttagccgccaaaactcttccaaggacaacaagagggtttc 60

                                                                        
Query: 1098 ttctgtgaagaatccaactccaaatttatcagctattccttcattgctcactgtcagaag 1157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttctgtgaagaatccaactccaaatttatcagctattccttcattgctcactgtcagaag 120

                 
Query: 1158 ctgaa 1162
            |||||
Sbjct: 121  ctgaa 125


>gnl|LJGI|TC74571 similar to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_64, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (21%)
          Length = 923

 Score = 91.7 bits (46), Expect = 9e-18
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1018 aggagttggggttggacacttgctagtcccatgagagcttttagcagcaaaaactcttcc 1077
            ||||| ||||||||| || |||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 237  aggagctggggttgggcatttgctagtccaatgagagcttttagcagcaaaaactcttct 296

                          
Query: 1078 aaggacaacaagag 1091
            || ||||| |||||
Sbjct: 297  aaagacaataagag 310


>gnl|LJGI|TC69169 homologue to UniRef100_A7Q8D5 Cluster: Chromosome chr5 scaffold_64,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_64, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 568

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 94  aacagccctggtgggatctgtgctttttgcctccaagaaaagcttgg 140
           |||| ||| ||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 430 aacaacccaggtgggatctgtgctctttgccttcaagagaagcttgg 384