Miyakogusa Predicted Gene

Lj6g3v1463920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1463920.1 CUFF.59662.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g436300.1 | glyoxysomal fatty acid beta-oxidation MFP-A pr...   259   5e-70
Medtr4g120130.1 | glyoxysomal fatty acid beta-oxidation MFP-A pr...   252   9e-68
Medtr6g087670.1 | glyoxysomal fatty acid beta-oxidation MFP-A pr...   192   1e-49
Medtr2g039260.1 | NAD-binding domain 3-hydroxyacyl-CoA dehydroge...   108   2e-24
Medtr8g061230.1 | 3-hydroxyacyl-CoA dehyrogenase | HC | chr8:210...    67   5e-12
Medtr8g058775.1 | 3-hydroxyacyl-CoA dehyrogenase | HC | chr8:202...    67   5e-12
Medtr0837s0020.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding p...    57   7e-09

>Medtr2g436300.1 | glyoxysomal fatty acid beta-oxidation MFP-A
           protein | HC | chr2:14109767-14119095 | 20130731
          Length = 721

 Score =  259 bits (663), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 126/137 (91%), Positives = 134/137 (97%)

Query: 10  QVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAGVNRVKA 69
           +VPGVTDRGLVPR VKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL+AGVNRVKA
Sbjct: 294 KVPGVTDRGLVPRQVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGVNRVKA 353

Query: 70  NLQSRVKKGKMTQEKFEKTISLLKGTLDYESFKDVDMVIEAVLENVSLKQQIFADLEKFC 129
           NLQSRVKKG+MT+EKFEKTISLLKGT+DYESFKDVD+VIEAV+ENV LKQQIFADLEK+C
Sbjct: 354 NLQSRVKKGQMTKEKFEKTISLLKGTIDYESFKDVDLVIEAVIENVVLKQQIFADLEKYC 413

Query: 130 PPHCIFASNTSTIDLNL 146
           PPHCI ASNTSTIDLNL
Sbjct: 414 PPHCILASNTSTIDLNL 430


>Medtr4g120130.1 | glyoxysomal fatty acid beta-oxidation MFP-A
           protein | HC | chr4:49803884-49795592 | 20130731
          Length = 723

 Score =  252 bits (643), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 119/137 (86%), Positives = 131/137 (95%)

Query: 10  QVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAGVNRVKA 69
           +VPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNY VILKEVNEKFLDAG+NR+KA
Sbjct: 296 KVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYSVILKEVNEKFLDAGINRIKA 355

Query: 70  NLQSRVKKGKMTQEKFEKTISLLKGTLDYESFKDVDMVIEAVLENVSLKQQIFADLEKFC 129
           NLQSRVKKG +TQE+FEK  SL+KG+LDY+SF+DVDMVIEAV+ENVSLKQQIFADLEK+C
Sbjct: 356 NLQSRVKKGNLTQERFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSLKQQIFADLEKYC 415

Query: 130 PPHCIFASNTSTIDLNL 146
           PPHCI  SNTSTIDL+L
Sbjct: 416 PPHCILGSNTSTIDLDL 432


>Medtr6g087670.1 | glyoxysomal fatty acid beta-oxidation MFP-A
           protein | HC | chr6:32981575-32974721 | 20130731
          Length = 722

 Score =  192 bits (487), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 111/137 (81%)

Query: 10  QVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAGVNRVKA 69
           ++PGVTD GL PR V+K A++GGGLMGSGIATALIL N  VILKEVN ++L  G+  ++A
Sbjct: 292 KIPGVTDIGLKPRNVRKAAVIGGGLMGSGIATALILGNIRVILKEVNSEYLQKGIKTIEA 351

Query: 70  NLQSRVKKGKMTQEKFEKTISLLKGTLDYESFKDVDMVIEAVLENVSLKQQIFADLEKFC 129
           N++  V + K+TQ+K E  +SLLKG LDY  FKDVDMVIEAV+E VSLKQ IF+DLEK C
Sbjct: 352 NVRGLVTRKKLTQQKAEGALSLLKGVLDYAEFKDVDMVIEAVIEKVSLKQDIFSDLEKIC 411

Query: 130 PPHCIFASNTSTIDLNL 146
           PPHCI ASNTSTIDLN+
Sbjct: 412 PPHCILASNTSTIDLNI 428


>Medtr2g039260.1 | NAD-binding domain 3-hydroxyacyl-CoA
          dehydrogenase | LC | chr2:17206458-17207351 | 20130731
          Length = 107

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 4  NTSWHEQVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAG 63
          N SWHE V GVTDRGL+ RPVK VAILGGGLM  GIAT LILSNY VILKEVNEKFL+A 
Sbjct: 33 NNSWHEWVLGVTDRGLISRPVKNVAILGGGLMNLGIATTLILSNYLVILKEVNEKFLEAC 92

Query: 64 VNRVKA 69
          VNRVK 
Sbjct: 93 VNRVKG 98


>Medtr8g061230.1 | 3-hydroxyacyl-CoA dehyrogenase | HC |
           chr8:21056770-21061794 | 20130731
          Length = 296

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%)

Query: 24  VKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAGVNRVKANLQSRVKKGKMTQE 83
           VK + ++GGG MGSGIA    +    V L +VN + L    + + +++   V K +++Q 
Sbjct: 4   VKMIGVIGGGQMGSGIAQLTAMHGIDVCLLDVNPQVLSTASSSISSSINRLVSKSQLSQS 63

Query: 84  KFEKTISLLKGTLDYESFKDVDMVIEAVLENVSLKQQIFADLEKFCPPHCIFASNTSTID 143
                +  L+ T +       D +IEA++E+  +K+ +F  L+K      I ASNTS+I 
Sbjct: 64  TASDALKRLRFTTNLNDLSVADFIIEAIVESEEVKKSLFVQLDKIAKSSAILASNTSSIS 123

Query: 144 L 144
           +
Sbjct: 124 I 124


>Medtr8g058775.1 | 3-hydroxyacyl-CoA dehyrogenase | HC |
           chr8:20270126-20275266 | 20130731
          Length = 296

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%)

Query: 24  VKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAGVNRVKANLQSRVKKGKMTQE 83
           VK + ++GGG MGSGIA    +    V L +VN + L    + + +++   V K +++Q 
Sbjct: 4   VKMIGVIGGGQMGSGIAQLTAMHGIDVCLLDVNPQVLSTASSSISSSINRLVSKSQLSQS 63

Query: 84  KFEKTISLLKGTLDYESFKDVDMVIEAVLENVSLKQQIFADLEKFCPPHCIFASNTSTID 143
                +  L+ T +       D +IEA++E+  +K+ +F  L+K      I ASNTS+I 
Sbjct: 64  TASDALKRLRFTTNLNDLSVADFIIEAIVESEEVKKSLFVQLDKIAKSSAILASNTSSIS 123

Query: 144 L 144
           +
Sbjct: 124 I 124


>Medtr0837s0020.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding
           protein, putative | LC | scaffold0837:2078-5260 |
           20130731
          Length = 962

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 14/124 (11%)

Query: 22  RPVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLDAGVNRVKANLQSRVKKGKMT 81
           +P+K+ A++G G MGSGIA  L  +   V L + N     + V  +++N      +    
Sbjct: 442 QPIKRAAVIGAGFMGSGIAHCLNRAGIEVFLHDANTDLAQSAVETLRSNADVDSTR---- 497

Query: 82  QEKFEKTISLLKGTLDYESFKDVDMVIEAVLENVSLKQQIFADLEKFCPPHCIFASNTST 141
                  + +L    D     +VD+V+EAV+E++ +K ++F  +++      I A+NTS 
Sbjct: 498 -------LDVLPALSD---LAEVDLVVEAVVESMEVKIEVFRMVDQHLKHGAILATNTSM 547

Query: 142 IDLN 145
           ++++
Sbjct: 548 LNID 551