Miyakogusa Predicted Gene

Lj6g3v1421130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1421130.1 Non Characterized Hit- tr|I1MME1|I1MME1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,36.09,0.000002,seg,NULL,CUFF.59476.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g437620.1 | hypothetical protein | HC | chr2:14804454-1480...    84   5e-17
Medtr2g437610.1 | hypothetical protein | HC | chr2:14800930-1480...    75   2e-14

>Medtr2g437620.1 | hypothetical protein | HC |
           chr2:14804454-14805154 | 20130731
          Length = 182

 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 18/161 (11%)

Query: 2   SQSLELPPSMASDLALKNQHMQKRSISLLTSNQGKTHAIPDEFDLRLSEQSNNRQNENFS 61
           SQS+ELP  +  +L  K    Q +++SL +  +GKTHA+PDEFDLR  E +N +Q   + 
Sbjct: 27  SQSVELPRKVG-NLNHKKHLKQCKTMSL-SKGKGKTHAVPDEFDLRSIENANRKQQSIYK 84

Query: 62  KTEKFIKE-GSKGGKRMEDXXXXXXXXXXXX------AKQVKARKIRGNIEMDHSVYPVV 114
             +  IKE  +K  KRM+                    K +K RKI    ++D+S+  V+
Sbjct: 85  NEDTIIKEVVAKSSKRMDSGHGFKCHSFGMCFPGFGKVKPIKTRKIE--TKVDYSMN-VM 141

Query: 115 SSAFSFEF-NSGVTTQGR-----NNEDESLSSYFELPSTML 149
           SS FS  F N  +  QGR     NNED S+SSYFELPST L
Sbjct: 142 SSTFSISFENFDINAQGRIVRENNNEDNSISSYFELPSTAL 182


>Medtr2g437610.1 | hypothetical protein | HC |
           chr2:14800930-14801313 | 20130731
          Length = 127

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 13/129 (10%)

Query: 30  LTSNQGKTHAIPDEFDLRLSEQSNNRQNENFSKTEKFI-KEGSKGGKRMEDXXXXXXXXX 88
           ++ ++GKTHA+ DEFDLR SE  N +Q ++ SK+E  I  +G K G   +          
Sbjct: 3   ISCSKGKTHALSDEFDLRPSENGNTKQ-QSCSKSEAIIVNDGPKDGDGFKCCAFRMCLPG 61

Query: 89  XXXAKQVKARKIRGNIEMDHSVYPVVSSAFSFEFNS-GVTTQGR-------NNEDESLSS 140
               K +K RK   N  MD S+  V+SS FSF F +  +  QGR       NNED+S+SS
Sbjct: 62  FGKVKPIKPRKSETN--MDCSMN-VMSSTFSFSFETFDINAQGRIVRENENNNEDDSISS 118

Query: 141 YFELPSTML 149
           YFELPS  L
Sbjct: 119 YFELPSAEL 127