Miyakogusa Predicted Gene

Lj6g3v1412750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1412750.1 NODE_36402_length_1593_cov_8.804143.path2.1
         (494 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC | chr...   771   0.0  
Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC | chr...   652   0.0  
Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC | chr...   400   e-111
Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC | chr...   392   e-109

>Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15158916-15161418 | 20130731
          Length = 497

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/503 (77%), Positives = 431/503 (85%), Gaps = 15/503 (2%)

Query: 1   MARKPSLVLSLFLWVSCFIVIGAYGEKNLPHMTISGGKHHVAIQRLQSFKASLTRHDSIA 60
           M RK   V  +FL V CFIVIG +G+KNLP   IS G +HV +++LQSFK SLTRHDS A
Sbjct: 1   MTRK-CFVCFMFLEVVCFIVIGVHGDKNLPARKISDGNYHVTMRKLQSFKTSLTRHDSFA 59

Query: 61  XXXXXXXXXXXXXXXXXXXXXXGVNNPRVYHVTSYGADPSGNSDSTEXXXXXXXXXXKGP 120
                                 G+NNPRVYHVTSYGADP+GNSDSTE           GP
Sbjct: 60  STPSSSFAPSPSSQPAE-----GMNNPRVYHVTSYGADPTGNSDSTEALLAAIADATNGP 114

Query: 121 SEGRLIEGIKNLGGAQVNLEGGNYLISKSLQLPVAGVGNLMIHGGTIRASNNFPADGYII 180
           SEG L+EGI NLGGAQ+NLEGGNY+I +SL+LPV+GVGNLMIHGGTI+ASN+FP DGYII
Sbjct: 115 SEGYLMEGISNLGGAQINLEGGNYMIRRSLKLPVSGVGNLMIHGGTIKASNDFPNDGYII 174

Query: 181 DLSAS---------PSSSYNFEYITLKDLLLDSNFRGGGISVINSLRTSIDNCYITHFTT 231
           DLS S         PSSSYNFEYITLKDLLLDSNFRGGGISVINSLRT+IDNCYITHFTT
Sbjct: 175 DLSTSSNENDGKNSPSSSYNFEYITLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTT 234

Query: 232 NGILVQSGHETYIRNSFLGQHITAGGDKHERNFSGTGINIQGNDNAVTDVVIFSAAIGIM 291
           NGILVQSGHETYIRNSFLGQHITAGGDK+ERNFSGTGINIQGNDNAVTDVVIFSAAIGIM
Sbjct: 235 NGILVQSGHETYIRNSFLGQHITAGGDKNERNFSGTGINIQGNDNAVTDVVIFSAAIGIM 294

Query: 292 VTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSS 351
           VTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSS
Sbjct: 295 VTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSS 354

Query: 352 FFLGDANIVLKSMKGVVNGVTIVDNMFSGSNKEVEIVHLDQSNSGFNQVDQVIVNRNIVR 411
           FFLGDANIVLKSMKGV+NGVTIVDNMFSGSN+ VE++HLD+SN  F+Q+DQV V+RN+  
Sbjct: 355 FFLGDANIVLKSMKGVLNGVTIVDNMFSGSNQGVEVIHLDKSNGPFHQIDQVTVDRNVAT 414

Query: 412 GMKLKATVAKKSMQGNGTSWSVDFNDVLLFPNLIKNVQYSLSSTGSTFPNHALRNVSENR 471
           GM LKATVAK+S+QGNGTSW+VDFN++LLFPNLIKNVQYSLSSTGS+FPNHA+RNVS+NR
Sbjct: 415 GMNLKATVAKRSLQGNGTSWNVDFNNILLFPNLIKNVQYSLSSTGSSFPNHAIRNVSDNR 474

Query: 472 VVIETNEAVSANVFITVDQSMAS 494
           VVIETNEAV+ANVF+ VDQSM+S
Sbjct: 475 VVIETNEAVAANVFVAVDQSMSS 497


>Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC |
           chr6:5462771-5458842 | 20130731
          Length = 494

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/496 (68%), Positives = 385/496 (77%), Gaps = 8/496 (1%)

Query: 1   MARKPSLVLSLFLWVSCFIVIGAYGEKNLPHMTISGGKHHVAIQRLQSFKASLTRHDSIA 60
           MAR   L L L L + CF V  AY  K LP  TISGG HH A+ +L +FK S   H+SIA
Sbjct: 5   MARISPLWLML-LIMPCFFVTYAYKVK-LPLRTISGGTHHDAMLQLTAFKVSFAEHNSIA 62

Query: 61  XXXXXXXXXXXXXXXXXXXXXXGVNNPRVYHVTSYGADPSGNSDSTEXXXXXXXXXXKGP 120
                                  +     Y VT YGADP+GNSDST+          KGP
Sbjct: 63  SPPSSFSPSPSPSPMPSQD----LKKSHEYLVTLYGADPTGNSDSTDALLAAIADAAKGP 118

Query: 121 SEGRLIEGIKNLGGAQVNLEGGNYLISKSLQLPVAGVGNLMIHGGTIRASNNFPADGYII 180
           S+G L+ GI +LGGAQ+NL+GGNYLISK L  P+AGVGNLMIHGGTI+ASNNFP++  +I
Sbjct: 119 SKGFLMNGIIDLGGAQINLQGGNYLISKPLHFPMAGVGNLMIHGGTIKASNNFPSNKNLI 178

Query: 181 DLS--ASPSSSYNFEYITLKDLLLDSNFRGGGISVINSLRTSIDNCYITHFTTNGILVQS 238
           DLS   S S SYN+EYITLKDL LDSNF+GGGIS+ NSLR +IDNCYITHF TNGILVQS
Sbjct: 179 DLSNFGSTSPSYNYEYITLKDLFLDSNFKGGGISITNSLRINIDNCYITHFITNGILVQS 238

Query: 239 GHETYIRNSFLGQHITAGGDKHERNFSGTGINIQGNDNAVTDVVIFSAAIGIMVTGQANT 298
           GHETYIRN+F+GQHITAGGDK+ER FSG GI++QGNDNA+TDVVIFSA IGIM+TGQANT
Sbjct: 239 GHETYIRNTFIGQHITAGGDKNERKFSGIGISLQGNDNAITDVVIFSANIGIMITGQANT 298

Query: 299 FSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDAN 358
            SGVHCYNKA+GFGGTGIYLKLPGLTQTRIVNSYMDYT+IVAEDPVQLHISSSFFLGDA 
Sbjct: 299 ISGVHCYNKASGFGGTGIYLKLPGLTQTRIVNSYMDYTNIVAEDPVQLHISSSFFLGDAK 358

Query: 359 IVLKSMKGVVNGVTIVDNMFSGSNKEVEIVHLDQSNSGFNQVDQVIVNRNIVRGMKLKAT 418
           IVLKS+KG+VNG+ IVDNMFSGSN   EIV LD S S F Q+DQV V RN+V GM LKAT
Sbjct: 359 IVLKSIKGIVNGLNIVDNMFSGSNHGDEIVKLDTSISPFKQIDQVFVARNVVNGMNLKAT 418

Query: 419 VAKKSMQGNGTSWSVDFNDVLLFPNLIKNVQYSLSSTGSTFPNHALRNVSENRVVIETNE 478
            A  S+ GNGTSW  DFN +L+FPNLI+NVQYSLS++G+TFPNHALRNVS N VVIET+E
Sbjct: 419 SAMISLHGNGTSWIADFNKILIFPNLIRNVQYSLSASGNTFPNHALRNVSHNFVVIETSE 478

Query: 479 AVSANVFITVDQSMAS 494
           AV+ANVF+ VDQ + S
Sbjct: 479 AVTANVFVKVDQGITS 494


>Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15178610-15181077 | 20130731
          Length = 488

 Score =  400 bits (1028), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/424 (52%), Positives = 289/424 (68%), Gaps = 25/424 (5%)

Query: 88  RVYHVTSYGADPSGNSDSTEXXXXXXXXXXKGPSEG-RLIEGIKNLGGAQVNLEGGNYLI 146
           RV +   YGADP+G ++S++             + G  L+ GI++LGG  ++ +GGNY I
Sbjct: 69  RVVYPIEYGADPTGVNESSDAMMKAVEAAFDIDNLGLELLLGIRDLGGVIIDFQGGNYKI 128

Query: 147 SKSLQLPVAGVGNLMIHGGTIRASNNFPADGYIIDLSASPS-------SSYN-------- 191
           S  +  P +  GNL++ GGT+RASN FP D Y+++L AS S       ++YN        
Sbjct: 129 SNPITFPSSS-GNLVVKGGTLRASNTFPTDRYLVELCASSSKVLQNATTAYNNKLLQQTI 187

Query: 192 ---FEYITLKDLLLDSNFRGGGISVINSLRTSIDNCYITHFTTNGILVQSGHETYIRNSF 248
              +E IT +D+L DS++RGGGI +++S R  IDNC+  HF T GI VQSGHET+I +SF
Sbjct: 188 GIYYEDITFRDILFDSSYRGGGIFIVDSARIRIDNCFFLHFNTEGIKVQSGHETFISSSF 247

Query: 249 LGQHITAGGDKHERNFSGTGINIQGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKA 308
           LGQH T GGDK ER FSGT I++  NDNA+TDV IFSAAIGI+V GQAN  +GVHCYNKA
Sbjct: 248 LGQHSTVGGDKGERQFSGTAIDLASNDNAITDVAIFSAAIGIVVRGQANIITGVHCYNKA 307

Query: 309 TGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKSMKGVV 368
           TGFGG GI LKL G +QTRI N YMDY SIV EDPVQ+H++  FFLGDANIVLKS+KG V
Sbjct: 308 TGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTDGFFLGDANIVLKSIKGKV 367

Query: 369 NGVTIVDNMFSGS-NKEVEIVHLDQSNSGFNQVDQVIVNRNIVRGMKLKATVAKKSMQGN 427
            G+ IV+NMFSG+ N  V IV LD    GF+ +DQV+++RN V GM L++TV K S+ GN
Sbjct: 368 YGLNIVNNMFSGNPNNNVPIVKLD---GGFSNIDQVVIDRNNVIGMILRSTVGKLSVDGN 424

Query: 428 GTSWSVDFNDVLLFPNLIKNVQYSLSS-TGSTFPNHALRNVSENRVVIETNEAVSANVFI 486
           GT W  DF++VL+FPN I + QYS  +  G  F  H++ NVS N VV+E+ + V   V  
Sbjct: 425 GTKWVGDFSNVLVFPNRISHFQYSFHTLEGPKFVAHSVSNVSNNVVVVESEKPVHGVVSY 484

Query: 487 TVDQ 490
            V+Q
Sbjct: 485 FVEQ 488


>Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC |
           chr4:38860963-38858816 | 20130731
          Length = 480

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/426 (46%), Positives = 283/426 (66%), Gaps = 28/426 (6%)

Query: 88  RVYHVTSYGADPSGNSDSTEXXXXXXXXXXKGPSEGRLIEGIKNLGGAQVNLEGGNYLIS 147
           RV + + YGADP+G+ +S++          K     +L+ G+ +LGG  ++L+GG+Y IS
Sbjct: 60  RVLYPSEYGADPTGSEESSDAILKVVEDAFKLQKGLQLVAGVNDLGGVIIDLQGGDYKIS 119

Query: 148 KSLQLPVAGVGNLMIHGGTIRASNNFPADGYIIDLSASPSSSYN---------------- 191
           K + L   G  N+++ GGT+RAS+ FP D +++++ +S S                    
Sbjct: 120 KPITLLPGG--NIVVKGGTLRASDTFPGDRHLVEMWSSNSKKLQTKEYMQGGNFSGIYAQ 177

Query: 192 -----FEYITLKDLLLDSNFRGGGISVINSLRTSIDNCYITHFTTNGILVQSGHETYIRN 246
                +E +T +D+L DS +RGGG+ +++S RT I+NC+  HFTT GILVQ GHET+I +
Sbjct: 178 NNGIYYEDVTFRDILFDSRYRGGGLFIVDSARTRINNCFFLHFTTEGILVQQGHETFISS 237

Query: 247 SFLGQHITAGGDKHERNFSGTGINIQGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYN 306
            FLGQH T GGD  E+++SG GI++  NDNA+TDV IFSAA GI++ GQAN  SGVHCYN
Sbjct: 238 CFLGQHSTVGGDHGEKDYSGVGIDLASNDNAITDVAIFSAATGIVLRGQANILSGVHCYN 297

Query: 307 KATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKSMKG 366
           KA GFGG GI +KL G + TRI N YMDYT IV EDPVQ+H+++  FLGDANI++K+ +G
Sbjct: 298 KAAGFGGIGILVKLAGNSLTRIDNCYMDYTGIVTEDPVQVHVTNCLFLGDANILIKAAEG 357

Query: 367 VVNGVTIVDNMFSGS-NKEVEIVHLDQSNSGFNQVDQVIVNRNIVRGMKLKATVAKKSMQ 425
            + G+ IVDNMF+G  NK+V IV L+     F+ VDQV+++RN V GM L++TV K ++ 
Sbjct: 358 QILGLNIVDNMFNGDPNKKVPIVSLEGQ---FSNVDQVVIDRNNVNGMGLRSTVGKLTVS 414

Query: 426 GNGTSWSVDFNDVLLFPNLIKNVQYSLSSTGS-TFPNHALRNVSENRVVIETNEAVSANV 484
           GNGT W  DF+ VL+FPN I +VQYS  + G   F  H++ NVS+N VV+E+ +     V
Sbjct: 415 GNGTKWEADFSSVLVFPNRISHVQYSFYAQGEPKFVAHSVTNVSDNVVVVESEKEAKGLV 474

Query: 485 FITVDQ 490
             +V+Q
Sbjct: 475 HFSVEQ 480