Miyakogusa Predicted Gene

Lj6g3v1201450.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201450.2 Non Chatacterized Hit- tr|I3SFU1|I3SFU1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.64,0,CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING PROTEIN
2A)(CHMP2A)(VACUOLAR PROTEIN-SOR,CUFF.59247.2
         (221 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g19000.1                                                       347   5e-96
Glyma09g07920.1                                                       347   5e-96
Glyma17g05880.1                                                       335   2e-92
Glyma13g16820.1                                                       185   3e-47
Glyma03g32180.1                                                       124   8e-29
Glyma19g34940.1                                                       122   2e-28
Glyma09g10020.1                                                       122   3e-28
Glyma15g22150.1                                                       122   3e-28
Glyma07g04120.1                                                        95   5e-20
Glyma05g10000.1                                                        77   1e-14
Glyma06g23570.2                                                        71   9e-13
Glyma06g23570.1                                                        71   9e-13
Glyma04g21900.1                                                        70   1e-12
Glyma12g08510.1                                                        69   4e-12
Glyma11g19930.1                                                        61   1e-09

>Glyma15g19000.1 
          Length = 223

 Score =  347 bits (891), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 179/221 (80%), Positives = 184/221 (83%)

Query: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVR 60
           MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQ QEKKLI EIKKSAKQGQMGAVR
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELL 180
           SLQKIMQEFERQNEKMELT+E+M                    VNQVLDEIGI++NQEL+
Sbjct: 121 SLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELV 180

Query: 181 NXXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQARLDNLR 221
           N            TKVPQVET   DDGGIDSDLQARLDNLR
Sbjct: 181 NAPSSAVAAPASKTKVPQVETTGNDDGGIDSDLQARLDNLR 221


>Glyma09g07920.1 
          Length = 223

 Score =  347 bits (891), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 179/221 (80%), Positives = 184/221 (83%)

Query: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVR 60
           MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQ QEKKLI EIKKSAKQGQMGAVR
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELL 180
           SLQKIMQEFERQNEKMELT+E+M                    VNQVLDEIGI++NQEL+
Sbjct: 121 SLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELV 180

Query: 181 NXXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQARLDNLR 221
           N            TKVPQVET   DDGGIDSDLQARLDNLR
Sbjct: 181 NAPSSAVAAPAAKTKVPQVETTGNDDGGIDSDLQARLDNLR 221


>Glyma17g05880.1 
          Length = 223

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/221 (76%), Positives = 181/221 (81%)

Query: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVR 60
           MSFIFGKRKTPAELLRENKRMLDKSIREI+RERQGLQ+QEKKLILEIKKSAKQGQMGAV+
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIDRERQGLQSQEKKLILEIKKSAKQGQMGAVK 60

Query: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           VMAKDLVRT+HQ+EKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMG MNRQMNLP
Sbjct: 61  VMAKDLVRTKHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGHMNRQMNLP 120

Query: 121 SLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELL 180
           SLQKI+QEFE QNE+MEL TEVM                    VNQVLDEIGI++NQELL
Sbjct: 121 SLQKILQEFETQNERMELITEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINQELL 180

Query: 181 NXXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQARLDNLR 221
           +            TKVPQVET   DD  IDS+LQARLDNLR
Sbjct: 181 SAPSTAVAASAAKTKVPQVETVGNDDATIDSNLQARLDNLR 221


>Glyma13g16820.1 
          Length = 245

 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/245 (48%), Positives = 134/245 (54%), Gaps = 30/245 (12%)

Query: 1   MSFIFGKRKTPAE--------LLRENKRMLDK----SIREIERERQ-----GLQAQEKKL 43
           MSFIFGKRKTPA          + E     D     ++R   R R       +  +E   
Sbjct: 1   MSFIFGKRKTPAVCSSYSSILFMCEYNVFFDSMKSNTLRSCVRNRMRETRFAVTGEETDF 60

Query: 44  ILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAM 103
             + K   +   MGAV+VMAKDLVRTRHQ+EKFYKLKSQLQG      TLKSTQAMGEAM
Sbjct: 61  GDKEKCQTRPDGMGAVKVMAKDLVRTRHQIEKFYKLKSQLQG------TLKSTQAMGEAM 114

Query: 104 KGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXX 163
           KGVTKAMG MNRQMNL SLQKI+QEFE QNE+MEL TEV                     
Sbjct: 115 KGVTKAMGHMNRQMNLSSLQKILQEFETQNERMELITEVTRDAIDDALEGDEEEEETEDL 174

Query: 164 VNQ--VLDEIGINVN-----QELLNXXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQAR 216
           VNQ  V   I  +++     + LLN            TKVPQV T   D   IDS LQAR
Sbjct: 175 VNQQEVCILIPCSLHFFFQLKALLNAPSNAVAASATKTKVPQVGTVGKDAAAIDSYLQAR 234

Query: 217 LDNLR 221
           L NLR
Sbjct: 235 LCNLR 239


>Glyma03g32180.1 
          Length = 212

 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 105/176 (59%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+ T  E LRE+KR +  + R IE+E   LQ++EKKL+ EIK++AK G   A +++A
Sbjct: 3   IFTKKPTAKEALRESKREMTNASRGIEKEIGALQSEEKKLVAEIKRTAKTGNEAATKILA 62

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + L+R R Q+      ++Q++G++   Q + +  ++   +KG TKAM  MN++M      
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMAAMNKKMEPAKQA 122

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 179
           KI+Q+F++Q+ +M++TTE+M                     NQVLDEIG++V  +L
Sbjct: 123 KIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQL 178


>Glyma19g34940.1 
          Length = 212

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 104/176 (59%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+ T  E LR++KR +  + R IE+E   LQ +EKKL+ EIK++AK G   A +++A
Sbjct: 3   IFTKKPTAKEALRDSKRQMTNATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILA 62

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + L+R R Q+      ++Q++G++   Q + +  ++   +KG TKAM  MN+QM      
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMVAMNKQMEPAKQA 122

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 179
           KI+Q+F++Q+ +M++TTE+M                     NQVLDEIG++V  +L
Sbjct: 123 KIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQL 178


>Glyma09g10020.1 
          Length = 219

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 103/176 (58%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+ +P E LR +KR +  + R IERE   LQ +EKKL+ EIK+ AK G   A R++A
Sbjct: 5   IFKKKTSPKEALRSSKREMAVATRGIEREIASLQMEEKKLVAEIKREAKTGNEAATRILA 64

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + LVR R Q+      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM      
Sbjct: 65  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQV 124

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 179
           K+++EF++Q+ ++++T E+M                     NQVLDEIG+++  +L
Sbjct: 125 KVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 180


>Glyma15g22150.1 
          Length = 217

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 103/176 (58%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+ +P E LR +KR +  + R IERE   LQ +EKKL+ EIK+ AK G   A R++A
Sbjct: 3   IFKKKTSPKEALRTSKREMAVATRGIEREITSLQMEEKKLVAEIKREAKTGNEAATRILA 62

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + LVR R Q+      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM      
Sbjct: 63  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQV 122

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 179
           K+++EF++Q+ ++++T E+M                     NQVLDEIG+++  +L
Sbjct: 123 KVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 178


>Glyma07g04120.1 
          Length = 197

 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 87/205 (42%), Gaps = 56/205 (27%)

Query: 62  MAKDLVRTRHQVEKF----------------------YK------------LKSQLQG-- 85
           MAKDL+RTRHQ+EK                       YK            L SQ+    
Sbjct: 2   MAKDLIRTRHQIEKVCFKLGILFNTRLSMVDGKKALPYKHVIVAYGTAIVGLPSQIAYGR 61

Query: 86  --------VSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKME 137
                   V  ++ TLKSTQAMGEA KG+TKAMGQMNR            EF    E   
Sbjct: 62  GVEKCHVIVFWQLATLKSTQAMGEATKGITKAMGQMNRWT--------ADEFAFCTED-- 111

Query: 138 LTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNXXXXXXXXX-XXXTKV 196
               VM                    VNQ LDEIGI++N EL+N              +V
Sbjct: 112 -DARVMGDAIDDALEGGEEEEETEELVNQFLDEIGIDINSELVNAPATTSVSAPAAKNRV 170

Query: 197 PQVETAATDDGGIDSDLQARLDNLR 221
            Q E+ A +D GI  DLQARL+NLR
Sbjct: 171 AQAESTANEDSGIYDDLQARLNNLR 195


>Glyma05g10000.1 
          Length = 132

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 45/61 (73%), Gaps = 12/61 (19%)

Query: 2  SFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRV 61
           FIFGKRKTPAELLRENKRMLDKS            +QEKKLILEIKKSAKQGQM +  +
Sbjct: 3  CFIFGKRKTPAELLRENKRMLDKS------------SQEKKLILEIKKSAKQGQMLSCSL 50

Query: 62 M 62
          +
Sbjct: 51 L 51


>Glyma06g23570.2 
          Length = 227

 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           I   +  P +LLR+ +R L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
           K+LVR+R  V + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  M  P +
Sbjct: 67  KELVRSRQTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 QKIMQEFERQNEKMELTTEVM 143
              MQEF ++  K  +  E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma06g23570.1 
          Length = 227

 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           I   +  P +LLR+ +R L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
           K+LVR+R  V + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  M  P +
Sbjct: 67  KELVRSRQTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 QKIMQEFERQNEKMELTTEVM 143
              MQEF ++  K  +  E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma04g21900.1 
          Length = 227

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           I   +  P +LLR+ +R L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
           K+LVR+R  V + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  M  P +
Sbjct: 67  KELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 QKIMQEFERQNEKMELTTEVM 143
              MQEF ++  K  +  E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma12g08510.1 
          Length = 228

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           I   +  P +LLR+ +R L +  R IER+ + +Q +EK +   I+++AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
           K+LVR+R  V + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  +  P +
Sbjct: 67  KELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLIKAPEM 125

Query: 123 QKIMQEFERQNEKMELTTEVM 143
              MQEF ++  K  +  E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma11g19930.1 
          Length = 229

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILE--IKKSAKQGQMGAVRV 61
           I   +  P +LLR+ +R L +  R IER+ + L  +EKK  ++  I+++AK+  MG+ + 
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQQCRNIERQIRVLIYREKKKNVQKAIREAAKRNDMGSAKA 66

Query: 62  MAKDLVRTRHQVEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           + K+LVR+R  V + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N     P
Sbjct: 67  LTKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLTKAP 125

Query: 121 SLQKIMQEFERQNEKMELTTEVM 143
            +   MQEF ++  K  +  E++
Sbjct: 126 EMAVAMQEFSKEMTKAGVIEEIV 148