Miyakogusa Predicted Gene

Lj6g3v1201450.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201450.2 Non Characterized Hit- tr|I3SFU1|I3SFU1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.64,0,CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING PROTEIN
2A)(CHMP2A)(VACUOLAR PROTEIN-SOR,CUFF.59247.2
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g041190.1 | charged multivesicular body protein | HC | chr...   347   5e-96
Medtr8g019700.1 | charged multivesicular body protein | HC | chr...   298   2e-81
Medtr7g097170.1 | charged multivesicular body protein | HC | chr...   134   6e-32
Medtr1g069715.1 | cytochrome P450 family protein | LC | chr1:303...   128   5e-30
Medtr2g047875.1 | charged multivesicular body protein | HC | chr...   125   4e-29
Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC ...    68   6e-12
Medtr2g100420.1 | charged multivesicular body protein | HC | chr...    49   5e-06

>Medtr2g041190.1 | charged multivesicular body protein | HC |
           chr2:18065645-18070228 | 20130731
          Length = 223

 Score =  347 bits (890), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 178/221 (80%), Positives = 184/221 (83%)

Query: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVR 60
           MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQ QEKKLI EIKKSAKQGQMGAVR
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           VMAKDLVRTRHQ+EKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELL 180
           +LQKIMQ+FERQNEKMELT EVM                    VNQVLDEIGI++NQEL+
Sbjct: 121 NLQKIMQDFERQNEKMELTMEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDINQELV 180

Query: 181 NXXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQARLDNLR 221
           N            TKVPQ ETAATDD GIDSDLQARLDNLR
Sbjct: 181 NAPSSAVAAPAAKTKVPQAETAATDDSGIDSDLQARLDNLR 221


>Medtr8g019700.1 | charged multivesicular body protein | HC |
           chr8:7006345-7009232 | 20130731
          Length = 224

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/222 (74%), Positives = 177/222 (79%), Gaps = 1/222 (0%)

Query: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVR 60
           MSF+FG RKTPAELLRENKRMLDKSIREIERERQGLQ+QEKKLI EIKK+AKQGQMGAVR
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIGEIKKNAKQGQMGAVR 60

Query: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
           VMAKDL+RTRHQ+EKFYKLKSQLQGV+LRIQTLKSTQAMG+AMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELL 180
           SLQKIMQEFERQNEKMEL +EVM                    VNQVLDEIGI++N ELL
Sbjct: 121 SLQKIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSELL 180

Query: 181 N-XXXXXXXXXXXXTKVPQVETAATDDGGIDSDLQARLDNLR 221
           N              ++ Q E    DDGGID DLQARLDNLR
Sbjct: 181 NAPASTSAAAPAAKNRIAQAEPTGNDDGGIDDDLQARLDNLR 222


>Medtr7g097170.1 | charged multivesicular body protein | HC |
           chr7:39086171-39082366 | 20130731
          Length = 212

 Score =  134 bits (338), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 121/223 (54%), Gaps = 20/223 (8%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+ T  E LRE+KR +  + R IERE   LQ +EKKL+ EIK++AK G  GA +V+A
Sbjct: 3   IFTKKPTAKEALRESKREMTNATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEGATKVLA 62

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + L+R R Q+      ++Q++G++   Q + +  ++   MKG TKAM  MN+QM      
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMEPAKQA 122

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNXX 183
           K+MQEF++Q+ +M++TTE+M                     NQVLDEIGI++  +L    
Sbjct: 123 KVMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGIDIASQL---- 178

Query: 184 XXXXXXXXXXTKVPQVETAATD-----DGGIDSDLQARLDNLR 221
                     +  P+   AA +       G+D DL+ RL  LR
Sbjct: 179 ----------SSAPKGRIAAKNTENVGSSGVD-DLEKRLAALR 210


>Medtr1g069715.1 | cytochrome P450 family protein | LC |
           chr1:30367208-30373894 | 20130731
          Length = 677

 Score =  128 bits (321), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 105/176 (59%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+  P E+LRE+KR +  + R IE+E   LQ +EKKL+ EIKK+AK G   A +++A
Sbjct: 468 IFSKKPKPKEVLRESKREMANATRGIEKEIGALQLEEKKLVAEIKKTAKTGNEAATKILA 527

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + LVR R Q+      ++Q++G++   Q L +  ++   MKG +KAM  MN+QM      
Sbjct: 528 RQLVRLRQQIANLQGSRAQMRGIATHTQALYAQSSISAGMKGASKAMEAMNKQMAPTKQA 587

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQEL 179
           KI+QEF++Q+ +M++TTE+M                     NQVLDEIG++V  +L
Sbjct: 588 KIIQEFQKQSAQMDITTEMMADAIDDVLDNDEAEDETEDLTNQVLDEIGVDVASQL 643


>Medtr2g047875.1 | charged multivesicular body protein | HC |
           chr2:20962877-20956118 | 20130731
          Length = 216

 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 6/218 (2%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           IF K+ TP E LR++KR +  + R IERE   LQ +EKKL+ EIK+ AK G   + +++A
Sbjct: 3   IFKKKTTPKEALRQSKREMSVATRGIEREIASLQMEEKKLVAEIKREAKTGNEASTKILA 62

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
           + LVR R Q+      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM      
Sbjct: 63  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQA 122

Query: 124 KIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGINVNQELLNXX 183
           K++QEF++Q+ ++++T E+M                     NQVLDEIG+++  +L +  
Sbjct: 123 KVIQEFQKQSAQLDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQLSSAP 182

Query: 184 XXXXXXXXXXTKVPQVETAATDDGGIDSDLQARLDNLR 221
                        P+ E+   +      +L+ RL +LR
Sbjct: 183 KGRIASRNAENAAPRSESQDVE------ELEKRLASLR 214


>Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC |
           chr4:21106196-21110863 | 20130731
          Length = 227

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 80/141 (56%), Gaps = 2/141 (1%)

Query: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMA 63
           I   +  P +LLR+ +R L +  R IER+ + +Q +EK +   IK++AK+  +G+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDIGSAKALA 66

Query: 64  KDLVRTRHQVEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
            +LVR+R  V + Y+ K+QL  +S+ + +++   + +G   K   + M  +N  M  P +
Sbjct: 67  TELVRSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 QKIMQEFERQNEKMELTTEVM 143
              MQEF ++  K  +  E++
Sbjct: 126 AVAMQEFSKEMTKAGVIEEIV 146


>Medtr2g100420.1 | charged multivesicular body protein | HC |
           chr2:43153549-43152380 | 20130731
          Length = 205

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 57/128 (44%)

Query: 52  KQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMG 111
           ++G M   R+ A++ +R R +   + +L S+L  VS R+ T      + ++M  + K++ 
Sbjct: 44  EKGNMDGARIYAENAIRKRTEQMNYLRLSSRLDAVSARLDTQAKMSTISKSMGNIVKSLE 103

Query: 112 QMNRQMNLPSLQKIMQEFERQNEKMELTTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEI 171
                 NL  + + M +FE+Q   ME+  E M                    + QV D+ 
Sbjct: 104 SSLATGNLQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDY 163

Query: 172 GINVNQEL 179
           G+ V+  L
Sbjct: 164 GLEVSVNL 171