Miyakogusa Predicted Gene
- Lj6g3v1201450.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1201450.2 Non Chatacterized Hit- tr|I3SFU1|I3SFU1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.64,0,CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING PROTEIN
2A)(CHMP2A)(VACUOLAR PROTEIN-SOR,CUFF.59247.2
(663 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59441 similar to UniRef100_A7PE04 Cluster: Chromosome... 1314 0.0
gnl|LJGI|TC57638 homologue to UniRef100_A7PE04 Cluster: Chromoso... 216 1e-55
>gnl|LJGI|TC59441 similar to UniRef100_A7PE04 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 910
Score = 1314 bits (663), Expect = 0.0
Identities = 663/663 (100%)
Strand = Plus / Plus
Query: 1 atgagtttcatcttcggcaagagaaaaacgcccgcagagctactgcgggaaaataagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgagtttcatcttcggcaagagaaaaacgcccgcagagctactgcgggaaaataagaga 170
Query: 61 atgttggacaaatcgattagagaaattgagcgcgagaggcaaggtttacaagcacaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atgttggacaaatcgattagagaaattgagcgcgagaggcaaggtttacaagcacaagag 230
Query: 121 aagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagctgttaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagctgttaga 290
Query: 181 gttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataagctaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataagctaaaa 350
Query: 241 tcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagcaatgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagcaatgggt 410
Query: 301 gaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaacttgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaacttgcca 470
Query: 361 tctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattgacgact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattgacgact 530
Query: 421 gaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagaggaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagaggaaaca 590
Query: 481 gacgatctagtgaaccaggttcttgatgagattggaattaatgtaaaccaagagcttttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gacgatctagtgaaccaggttcttgatgagattggaattaatgtaaaccaagagcttttg 650
Query: 541 aatgcaccatcatctgctgttgctgctccagctgcaagtactaaggttcctcaagttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aatgcaccatcatctgctgttgctgctccagctgcaagtactaaggttcctcaagttgaa 710
Query: 601 actgcagcgactgatgatggcgggatagatagtgatttacaggcaaggttagacaacttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 actgcagcgactgatgatggcgggatagatagtgatttacaggcaaggttagacaacttg 770
Query: 661 aga 663
|||
Sbjct: 771 aga 773
>gnl|LJGI|TC57638 homologue to UniRef100_A7PE04 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (96%)
Length = 947
Score = 216 bits (109), Expect = 1e-55
Identities = 331/405 (81%)
Strand = Plus / Plus
Query: 115 caagagaagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagct 174
||||| ||||| |||||| | ||||| ||||| | ||| |||||||| || ||||| ||
Sbjct: 227 caagaaaagaagttgattgtagagatcaagaagaatgctaaacaaggacagatgggggcg 286
Query: 175 gttagagttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataag 234
|| ||||| ||||| || |||||| | |||| | |||||| ||||||||||||| |||
Sbjct: 287 gtgagagtgatggccaaggatcttatccgaactcgccatcagattgaaaagttttacaag 346
Query: 235 ctaaaatcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagca 294
|| ||||| || ||||| ||||| ||| | ||||||||||| | || || || |||||
Sbjct: 347 cttaaatcccaactccagggtgtttctttgagaattcagactctaaaatctacccaagcg 406
Query: 295 atgggtgaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaac 354
||||| ||||| |||||||| || || ||||| ||||| |||||||||||| |||||
Sbjct: 407 atgggagaggctatgaaaggagtaactaaggcaatgggtcaaatgaataggaggatgaat 466
Query: 355 ttgccatctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattg 414
||||| || || ||||| || |||||||| ||||| | |||||||||||||||||| ||
Sbjct: 467 ttgccttccttacagaagataatgcaagagtttgaacggcagaatgagaagatggaactg 526
Query: 415 acgactgaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagag 474
| |||||||||||||||||||||| ||||||||| ||||||| ||||| || || ||
Sbjct: 527 gtgtctgaggtgatgggagatgcaattgatgatgctctggaaggtgatgaagaggaggaa 586
Query: 475 gaaacagacgatctagtgaaccaggttcttgatgagattggaatt 519
|| |||||||| || || || ||||||||||||||||||||||||
Sbjct: 587 gagacagacgagcttgtcaatcaggttcttgatgagattggaatt 631