Miyakogusa Predicted Gene

Lj6g3v1177230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177230.1 tr|Q69P88|Q69P88_ORYSJ Os09g0439800 protein
OS=Oryza sativa subsp. japonica GN=OJ1344_B01.21 PE=4
SV,34.3,7e-19,coiled-coil,NULL; seg,NULL,CUFF.59195.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g042670.1 | hypothetical protein | LC | chr2:18610647-1861...   160   1e-39
Medtr8g021237.1 | hypothetical protein | HC | chr8:7629440-76324...   101   9e-22

>Medtr2g042670.1 | hypothetical protein | LC |
           chr2:18610647-18613272 | 20130731
          Length = 237

 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 125/271 (46%), Gaps = 46/271 (16%)

Query: 1   MKIFLWXXXXXXXXXXXXXPTSASTTHYMLHESCKQEFNDWPQAFLHIGTLANSYA---- 56
           M IF W             P+S S TH+ML+E+ KQEF+DW  A L IGTL N+      
Sbjct: 1   MNIFKWMQNRLNGTNGKMKPSSISATHHMLNETYKQEFSDWDHAILAIGTLGNNNLNENS 60

Query: 57  ------EDSFPFQKYTKEFKLEEVGKLQNELNMKXXXXXXXXXXXXXXXHSSLEPAAQEV 110
                 EDS  FQ +T EF  EEVG  QNEL M                  +LE +    
Sbjct: 61  NKSIDEEDSHSFQDFTHEFSFEEVGNFQNELKM------------------NLEES---- 98

Query: 111 ETISDVSNIKHGNFYPGNSLIHSTGRDLCYDXXXXXXXXXXXXXXXXXMFACRKGFQPTP 170
                      GNFYP N+LI + GR                      +F C     PT 
Sbjct: 99  -----------GNFYPSNNLICNRGRKSLDKSNKNEVSNQSLSFLLKKIFVCGGELPPTS 147

Query: 171 SFKDPLLSTDSRMEKILRAMLQKKIHPQGSSSTTFVKKYLEKDQMPQFXXXXXXXXXXXX 230
            FKDPL ST+SRMEKILRA+L KKIHP GS STTFV KYLE +  P++            
Sbjct: 148 VFKDPL-STESRMEKILRAILHKKIHPHGSCSTTFVNKYLENNSKPEYDYEDEDEDEDEY 206

Query: 231 XXXXXX--PTSATNNGSKWVKTDSEYIVLEI 259
                     S    G KWVKT+SEYIVLEI
Sbjct: 207 EYEYEEELKNSVVEKGCKWVKTNSEYIVLEI 237


>Medtr8g021237.1 | hypothetical protein | HC | chr8:7629440-7632401
           | 20130731
          Length = 262

 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 110/279 (39%), Gaps = 37/279 (13%)

Query: 1   MKIFLWXXXXXXXXXXXXXPTSASTTHYMLHESCKQEFNDWPQAFLHIGTLAN------- 53
           MK F W               ++++T Y   E  ++EF+DWP + L IGT  N       
Sbjct: 1   MKFFNWMQNKLGGKQENRKSNTSTSTTYAKPEP-REEFSDWPHSLLAIGTFGNNNEITQN 59

Query: 54  -----SYAEDSFPFQKYTKEFKLEEVGKLQNELNMKXXXXXXXXXXXXXXXHSSLEPAAQ 108
                +  ED    ++   +F  EE+GKLQ EL                           
Sbjct: 60  IENQNTQQEDPSSSEEVP-DFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPS 118

Query: 109 EVETISDVSNI--------KHGNFYPGNSLIHSTGRDLCYDXXXXXXXXXXXXXXXXXMF 160
            +E    +SN         K  +     S+I    +D+C +                 MF
Sbjct: 119 SLEVDRRISNALCSESGGDKDEDIEKTLSVILDKCKDICAEKSKKSIGKKSISFLLKKMF 178

Query: 161 ACRKGFQPTPSFKDPLLSTDSRMEKILRAMLQKKIHPQGSSSTTFVKKYLEKDQMPQFXX 220
            CR GF PTPS +D L   +SRMEK+LR ML KK++ Q +S    +KK LE  +      
Sbjct: 179 VCRSGFAPTPSLRDTL--QESRMEKLLRTMLHKKLYTQNNSRAPVLKKCLENKK------ 230

Query: 221 XXXXXXXXXXXXXXXXPTSATNNGSKWVKTDSEYIVLEI 259
                                + GSKWVKTDSEYIVLEI
Sbjct: 231 -------SIKKRNEDEAEERIDEGSKWVKTDSEYIVLEI 262