Miyakogusa Predicted Gene

Lj6g3v1139640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1139640.1 tr|A4S674|A4S674_OSTLU Predicted protein
(Fragment) OS=Ostreococcus lucimarinus (strain CCE9901)
GN=,24.15,1e-18,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Transmembrane protein 135,CUFF.59143.1
         (397 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g044600.1 | hypothetical protein | HC | chr2:19375383-1936...   654   0.0  
Medtr1g072830.1 | Tim17/Tim22/Tim23/Pmp24 family protein | HC | ...   130   2e-30
Medtr1g072830.2 | Tim17/Tim22/Tim23/Pmp24 family protein | HC | ...   122   6e-28

>Medtr2g044600.1 | hypothetical protein | HC |
           chr2:19375383-19369397 | 20130731
          Length = 364

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/338 (92%), Positives = 326/338 (96%)

Query: 59  TGKWRAMLAGAVAGHSMLLTGLEAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTW 118
             +WRA+LAGAVAG SMLLTGLEAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTW
Sbjct: 26  VARWRALLAGAVAGQSMLLTGLEAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTW 85

Query: 119 KHGDIFLMCLSSSQILSAYILKQESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNL 178
           KHGDIFLMCLSSSQILSAYIL QESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNL
Sbjct: 86  KHGDIFLMCLSSSQILSAYILNQESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNL 145

Query: 179 DAIEKYYKTVGVDVKLDPNMKVPCSIVHGNQSCGGHVLSFLLQAYKRALPVYLPVYLIPA 238
           +AI+KYYKT+GVDVKLDPNMKVPC+IVHGNQSC GH++SFL+QAYKRALPVYLPVYLIPA
Sbjct: 146 NAIKKYYKTMGVDVKLDPNMKVPCTIVHGNQSCSGHIISFLIQAYKRALPVYLPVYLIPA 205

Query: 239 LIVHRKGLLQRPNTILAKGLVGTARSSLFLSVYCTSAWMWTCFLFRIFRRCNVPMVAMGT 298
           LIVHRKGLLQRP TILAKGL+GTARSSLFLSVYC SAWMWTCFLFRIF+ CNVPMVAMGT
Sbjct: 206 LIVHRKGLLQRPYTILAKGLIGTARSSLFLSVYCASAWMWTCFLFRIFKTCNVPMVAMGT 265

Query: 299 FPTGLALAIEKKSRRIEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVMVFSLSTAI 358
           FP GL LAIEKKSRR+EISLYCLARAIESFFTCIADAGYLPQSRRIKRADV+VFSLSTAI
Sbjct: 266 FPPGLGLAIEKKSRRMEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVVVFSLSTAI 325

Query: 359 IMHCYAQEREVFKSKYLNVLDWVFGVPPPPCETPRYKD 396
           IMHCYAQER+VF+SKYLNVLDWVFGVPPP CETPR KD
Sbjct: 326 IMHCYAQERDVFRSKYLNVLDWVFGVPPPACETPRCKD 363


>Medtr1g072830.1 | Tim17/Tim22/Tim23/Pmp24 family protein | HC |
           chr1:32349332-32342930 | 20130731
          Length = 528

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 189/388 (48%), Gaps = 22/388 (5%)

Query: 19  SEAIVTALKETLRYGLFLGTFAGTFVSMDELIAAVGGHRRTGKWRAMLAGAVAGHSMLLT 78
           SE  +   +E  R GL  G F G++ ++  L   +   ++     A+LAG+VAG S+L  
Sbjct: 117 SEKDLMVREEACRIGLLFGGFTGSYHALRCLFRKL--RKKETPVNAILAGSVAGFSILAL 174

Query: 79  GLEAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTWKHGDIFLMCLSSSQILSAYI 138
               +  +LA+Y+L R A  A        +F        W+HGD  L  LS +Q++ A++
Sbjct: 175 NDSNRRRTLALYLLARLAQCAYNSAKSKNKFHLWGS--HWRHGDSLLFSLSCAQVMYAFV 232

Query: 139 LKQESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLDAIEKYYKTVGVD--VKLD- 195
           ++ ESLP SY+ F+ K G     + + V+D   G P  ++ ++  +    G    VKL+ 
Sbjct: 233 MRPESLPKSYQDFIQKTGPVAAPVYRAVRDSCRGHP-VDVASLHAFLSRRGKSDYVKLEE 291

Query: 196 -PNMKVPCSIVH-GNQSCGGHVLSFLLQAYKRALPVYLPVYLIPALIVHRKGLLQRPNTI 253
            P++ +PCSI+H G  SC  H ++     +K+  P+Y  +  +P +++H +     P   
Sbjct: 292 FPSI-IPCSIIHAGTNSCLAHEVNATSATFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRT 350

Query: 254 LAKGLVGTARSSLFLSVYCTSAWMWTCFLFRIFRRCNVPMVAMGTFPTGLALAIEKKSRR 313
               + G  RS+ FLS +        C   ++  + +  +  +    + L++ +EKK+RR
Sbjct: 351 FWFAVKGAVRSTAFLSAFVGIFQAVICLHRKVASKDHKLVYWIAGGISALSVLLEKKARR 410

Query: 314 IEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVMVFSLSTAIIMHCYAQEREVFKSK 373
            E++LY L R+++S +  + +   LP   +I+ A+V +FSL    IM+    E E   + 
Sbjct: 411 GELALYVLPRSVDSLWYILVNRHLLP---KIRNAEVFLFSLCMGGIMYYLEYEPETM-AP 466

Query: 374 YLNVLDWVF-------GVPPPPCETPRY 394
           +L  L   F         PPP  +T  Y
Sbjct: 467 FLRGLIRRFLASRISNPSPPPSNQTASY 494


>Medtr1g072830.2 | Tim17/Tim22/Tim23/Pmp24 family protein | HC |
           chr1:32349332-32343797 | 20130731
          Length = 450

 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 170/339 (50%), Gaps = 14/339 (4%)

Query: 19  SEAIVTALKETLRYGLFLGTFAGTFVSMDELIAAVGGHRRTGKWRAMLAGAVAGHSMLLT 78
           SE  +   +E  R GL  G F G++ ++  L   +   ++     A+LAG+VAG S+L  
Sbjct: 117 SEKDLMVREEACRIGLLFGGFTGSYHALRCLFRKL--RKKETPVNAILAGSVAGFSILAL 174

Query: 79  GLEAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTWKHGDIFLMCLSSSQILSAYI 138
               +  +LA+Y+L R A  A        +F        W+HGD  L  LS +Q++ A++
Sbjct: 175 NDSNRRRTLALYLLARLAQCAYNSAKSKNKFHLWGS--HWRHGDSLLFSLSCAQVMYAFV 232

Query: 139 LKQESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLDAIEKYYKTVGVD--VKLD- 195
           ++ ESLP SY+ F+ K G     + + V+D   G P  ++ ++  +    G    VKL+ 
Sbjct: 233 MRPESLPKSYQDFIQKTGPVAAPVYRAVRDSCRGHP-VDVASLHAFLSRRGKSDYVKLEE 291

Query: 196 -PNMKVPCSIVH-GNQSCGGHVLSFLLQAYKRALPVYLPVYLIPALIVHRKGLLQRPNTI 253
            P++ +PCSI+H G  SC  H ++     +K+  P+Y  +  +P +++H +     P   
Sbjct: 292 FPSI-IPCSIIHAGTNSCLAHEVNATSATFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRT 350

Query: 254 LAKGLVGTARSSLFLSVYCTSAWMWTCFLFRIFRRCNVPMVAMGTFPTGLALAIEKKSRR 313
               + G  RS+ FLS +        C   ++  + +  +  +    + L++ +EKK+RR
Sbjct: 351 FWFAVKGAVRSTAFLSAFVGIFQAVICLHRKVASKDHKLVYWIAGGISALSVLLEKKARR 410

Query: 314 IEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVMVF 352
            E++LY L R+++S +  + +   LP   +I+ A+V  F
Sbjct: 411 GELALYVLPRSVDSLWYILVNRHLLP---KIRNAEVCCF 446