Miyakogusa Predicted Gene

Lj6g3v1139640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1139640.1 tr|A4S674|A4S674_OSTLU Predicted protein
(Fragment) OS=Ostreococcus lucimarinus (strain CCE9901)
GN=,24.15,1e-18,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Transmembrane protein 135,CUFF.59143.1
         (1197 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594850 weakly similar to UniRef100_A9TY62 Cluster: Pr...   228   6e-59

>gnl|LJGI|DC594850 weakly similar to UniRef100_A9TY62 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (9%)
          Length = 160

 Score =  228 bits (115), Expect = 6e-59
 Identities = 126/130 (96%)
 Strand = Plus / Plus

                                                                       
Query: 102 cttccttggaaccttcgccggaacgtttgtgtcaatggatgagcttatagctgctgttgg 161
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cttccttggaaccttccccggaacgtttgtgtcaatggatgagcttatagctgctgttgg 60

                                                                       
Query: 162 aggccatcgcaggacagggaagtggagggctatgttggctggggcggttgctgggcattc 221
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aggccatcccaggacagggaagtggagggctatgttggctggggcggttgctgggcattc 120

                     
Query: 222 gatgcttttg 231
            || ||||||
Sbjct: 121 catncttttg 130