Miyakogusa Predicted Gene

Lj6g3v1116230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1116230.1 Non Characterized Hit- tr|H3GZ14|H3GZ14_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,30.51,8e-19,GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN
(SNAP-GAMMA),NULL; SOLUBLE NSF ATTACHMENT PROTEIN (SNAP),NSF
at,CUFF.59113.1
         (295 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g047110.1 | gamma-soluble NSF attachment protein | HC | ch...   501   e-142
Medtr2g047110.2 | gamma-soluble NSF attachment protein | HC | ch...   473   e-134
Medtr8g089250.2 | gamma-soluble NSF attachment protein | HC | ch...   450   e-127
Medtr8g089250.1 | gamma-soluble NSF attachment protein | HC | ch...   450   e-127
Medtr2g047110.3 | gamma-soluble NSF attachment protein | HC | ch...   395   e-110

>Medtr2g047110.1 | gamma-soluble NSF attachment protein | HC |
           chr2:20663979-20669808 | 20130731
          Length = 296

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 237/279 (84%), Positives = 261/279 (93%)

Query: 1   MAASDPNKLIAKADKLTRLSLTRWNADWRNATVLYEQAANGFRLAKDYEKAKIAFEKASK 60
           M++SDPNKL+AKADKLT+LSLTRW+ADW+ ATVLYEQAANGFR A+++EKAKIA+EKAS+
Sbjct: 1   MSSSDPNKLLAKADKLTKLSLTRWSADWKTATVLYEQAANGFRGARNHEKAKIAYEKASQ 60

Query: 61  GQEMLSSPWDAAKHMESAAALAKELSNWREAADFYRKASELYMECDRPQPASDALGKGAR 120
           GQ+MLSSPWDAAKHMESAAALAKELSNWRE ADFY+KASELYMEC RPQPASDAL KGAR
Sbjct: 61  GQQMLSSPWDAAKHMESAAALAKELSNWREVADFYQKASELYMECGRPQPASDALAKGAR 120

Query: 121 ALEDAMPEEAVQLYADACTILEEDGKEQMTFDLYRAASSVYIKLEKYTDAASVMLNLGLA 180
           ALED MPEEA+QLY DACTILE+D KEQMTFDLYRA +SVYIKLEKYTDAAS +L LGLA
Sbjct: 121 ALEDTMPEEAIQLYTDACTILEDDEKEQMTFDLYRAVTSVYIKLEKYTDAASSLLRLGLA 180

Query: 181 ADKCNATNSQCKAYLGAIIIYLYAHDFKQAQKCYNDCSQIDAFLSSDQSRCASKFLAAYT 240
           ADKCNATNSQ KAYL AII+YLYAHDFKQA+KCYNDCSQIDAFL SD +RCASKFL+AYT
Sbjct: 181 ADKCNATNSQSKAYLSAIIVYLYAHDFKQAEKCYNDCSQIDAFLKSDHNRCASKFLSAYT 240

Query: 241 DGDVEEIKRIAQSSAVSHLDHVIIKLARKLPTGDVSGFK 279
           DGDV+EIK+IAQSSAVSHLDH II+LARKLPTGDVS  K
Sbjct: 241 DGDVDEIKKIAQSSAVSHLDHAIIRLARKLPTGDVSALK 279


>Medtr2g047110.2 | gamma-soluble NSF attachment protein | HC |
           chr2:20662224-20669808 | 20130731
          Length = 288

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 224/263 (85%), Positives = 245/263 (93%)

Query: 17  TRLSLTRWNADWRNATVLYEQAANGFRLAKDYEKAKIAFEKASKGQEMLSSPWDAAKHME 76
           T+LSLTRW+ADW+ ATVLYEQAANGFR A+++EKAKIA+EKAS+GQ+MLSSPWDAAKHME
Sbjct: 9   TKLSLTRWSADWKTATVLYEQAANGFRGARNHEKAKIAYEKASQGQQMLSSPWDAAKHME 68

Query: 77  SAAALAKELSNWREAADFYRKASELYMECDRPQPASDALGKGARALEDAMPEEAVQLYAD 136
           SAAALAKELSNWRE ADFY+KASELYMEC RPQPASDAL KGARALED MPEEA+QLY D
Sbjct: 69  SAAALAKELSNWREVADFYQKASELYMECGRPQPASDALAKGARALEDTMPEEAIQLYTD 128

Query: 137 ACTILEEDGKEQMTFDLYRAASSVYIKLEKYTDAASVMLNLGLAADKCNATNSQCKAYLG 196
           ACTILE+D KEQMTFDLYRA +SVYIKLEKYTDAAS +L LGLAADKCNATNSQ KAYL 
Sbjct: 129 ACTILEDDEKEQMTFDLYRAVTSVYIKLEKYTDAASSLLRLGLAADKCNATNSQSKAYLS 188

Query: 197 AIIIYLYAHDFKQAQKCYNDCSQIDAFLSSDQSRCASKFLAAYTDGDVEEIKRIAQSSAV 256
           AII+YLYAHDFKQA+KCYNDCSQIDAFL SD +RCASKFL+AYTDGDV+EIK+IAQSSAV
Sbjct: 189 AIIVYLYAHDFKQAEKCYNDCSQIDAFLKSDHNRCASKFLSAYTDGDVDEIKKIAQSSAV 248

Query: 257 SHLDHVIIKLARKLPTGDVSGFK 279
           SHLDH II+LARKLPTGDVS  K
Sbjct: 249 SHLDHAIIRLARKLPTGDVSALK 271


>Medtr8g089250.2 | gamma-soluble NSF attachment protein | HC |
           chr8:37078398-37082367 | 20130731
          Length = 296

 Score =  450 bits (1157), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 210/279 (75%), Positives = 243/279 (87%)

Query: 1   MAASDPNKLIAKADKLTRLSLTRWNADWRNATVLYEQAANGFRLAKDYEKAKIAFEKASK 60
           MA+SDP  LI+KAD LT LS TRWNADWRNATVLYEQAA+GF++AKDYE+AK A+EKAS+
Sbjct: 1   MASSDPQNLISKADNLTTLSFTRWNADWRNATVLYEQAASGFKIAKDYERAKSAYEKASQ 60

Query: 61  GQEMLSSPWDAAKHMESAAALAKELSNWREAADFYRKASELYMECDRPQPASDALGKGAR 120
           GQEMLSSPW+AAK++ESAAA++KEL NW E  D YR+ASELY+EC R QPASDAL KGAR
Sbjct: 61  GQEMLSSPWEAAKNIESAAAMSKELRNWSEVRDLYRRASELYIECGRSQPASDALAKGAR 120

Query: 121 ALEDAMPEEAVQLYADACTILEEDGKEQMTFDLYRAASSVYIKLEKYTDAASVMLNLGLA 180
           ALED++PEEA++LY DACTILEEDG +QM FDLYRA++SVYIK +KYTDAAS +L LG+A
Sbjct: 121 ALEDSLPEEAIKLYTDACTILEEDGGDQMAFDLYRASASVYIKHDKYTDAASFLLRLGVA 180

Query: 181 ADKCNATNSQCKAYLGAIIIYLYAHDFKQAQKCYNDCSQIDAFLSSDQSRCASKFLAAYT 240
           ADKCNA NSQ KAYL AII+YLY  DFKQA+KCYNDCSQID FL SD  RCASK L A+ 
Sbjct: 181 ADKCNAPNSQTKAYLSAIIVYLYGQDFKQAEKCYNDCSQIDGFLRSDHGRCASKLLGAFK 240

Query: 241 DGDVEEIKRIAQSSAVSHLDHVIIKLARKLPTGDVSGFK 279
           DGD+EEIKRI QSS +S+LDHVII+LARKLPTGDV+  K
Sbjct: 241 DGDIEEIKRITQSSIISNLDHVIIRLARKLPTGDVNALK 279


>Medtr8g089250.1 | gamma-soluble NSF attachment protein | HC |
           chr8:37078398-37082414 | 20130731
          Length = 296

 Score =  450 bits (1157), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 210/279 (75%), Positives = 243/279 (87%)

Query: 1   MAASDPNKLIAKADKLTRLSLTRWNADWRNATVLYEQAANGFRLAKDYEKAKIAFEKASK 60
           MA+SDP  LI+KAD LT LS TRWNADWRNATVLYEQAA+GF++AKDYE+AK A+EKAS+
Sbjct: 1   MASSDPQNLISKADNLTTLSFTRWNADWRNATVLYEQAASGFKIAKDYERAKSAYEKASQ 60

Query: 61  GQEMLSSPWDAAKHMESAAALAKELSNWREAADFYRKASELYMECDRPQPASDALGKGAR 120
           GQEMLSSPW+AAK++ESAAA++KEL NW E  D YR+ASELY+EC R QPASDAL KGAR
Sbjct: 61  GQEMLSSPWEAAKNIESAAAMSKELRNWSEVRDLYRRASELYIECGRSQPASDALAKGAR 120

Query: 121 ALEDAMPEEAVQLYADACTILEEDGKEQMTFDLYRAASSVYIKLEKYTDAASVMLNLGLA 180
           ALED++PEEA++LY DACTILEEDG +QM FDLYRA++SVYIK +KYTDAAS +L LG+A
Sbjct: 121 ALEDSLPEEAIKLYTDACTILEEDGGDQMAFDLYRASASVYIKHDKYTDAASFLLRLGVA 180

Query: 181 ADKCNATNSQCKAYLGAIIIYLYAHDFKQAQKCYNDCSQIDAFLSSDQSRCASKFLAAYT 240
           ADKCNA NSQ KAYL AII+YLY  DFKQA+KCYNDCSQID FL SD  RCASK L A+ 
Sbjct: 181 ADKCNAPNSQTKAYLSAIIVYLYGQDFKQAEKCYNDCSQIDGFLRSDHGRCASKLLGAFK 240

Query: 241 DGDVEEIKRIAQSSAVSHLDHVIIKLARKLPTGDVSGFK 279
           DGD+EEIKRI QSS +S+LDHVII+LARKLPTGDV+  K
Sbjct: 241 DGDIEEIKRITQSSIISNLDHVIIRLARKLPTGDVNALK 279


>Medtr2g047110.3 | gamma-soluble NSF attachment protein | HC |
           chr2:20664323-20669808 | 20130731
          Length = 233

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 200/216 (92%)

Query: 64  MLSSPWDAAKHMESAAALAKELSNWREAADFYRKASELYMECDRPQPASDALGKGARALE 123
           MLSSPWDAAKHMESAAALAKELSNWRE ADFY+KASELYMEC RPQPASDAL KGARALE
Sbjct: 1   MLSSPWDAAKHMESAAALAKELSNWREVADFYQKASELYMECGRPQPASDALAKGARALE 60

Query: 124 DAMPEEAVQLYADACTILEEDGKEQMTFDLYRAASSVYIKLEKYTDAASVMLNLGLAADK 183
           D MPEEA+QLY DACTILE+D KEQMTFDLYRA +SVYIKLEKYTDAAS +L LGLAADK
Sbjct: 61  DTMPEEAIQLYTDACTILEDDEKEQMTFDLYRAVTSVYIKLEKYTDAASSLLRLGLAADK 120

Query: 184 CNATNSQCKAYLGAIIIYLYAHDFKQAQKCYNDCSQIDAFLSSDQSRCASKFLAAYTDGD 243
           CNATNSQ KAYL AII+YLYAHDFKQA+KCYNDCSQIDAFL SD +RCASKFL+AYTDGD
Sbjct: 121 CNATNSQSKAYLSAIIVYLYAHDFKQAEKCYNDCSQIDAFLKSDHNRCASKFLSAYTDGD 180

Query: 244 VEEIKRIAQSSAVSHLDHVIIKLARKLPTGDVSGFK 279
           V+EIK+IAQSSAVSHLDH II+LARKLPTGDVS  K
Sbjct: 181 VDEIKKIAQSSAVSHLDHAIIRLARKLPTGDVSALK 216