Miyakogusa Predicted Gene
- Lj6g3v1116230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1116230.1 Non Chatacterized Hit- tr|H3GZ14|H3GZ14_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,30.51,8e-19,GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN
(SNAP-GAMMA),NULL; SOLUBLE NSF ATTACHMENT PROTEIN (SNAP),NSF
at,CUFF.59113.1
(888 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58445 similar to UniRef100_A7QC03 Cluster: Chromosome... 1544 0.0
gnl|LJGI|TC59034 similar to UniRef100_A7QC03 Cluster: Chromosome... 1346 0.0
gnl|LJGI|FS343363 similar to UniRef100_A7QC03 Cluster: Chromosom... 686 0.0
gnl|LJGI|DC598559 similar to UniRef100_A7QC03 Cluster: Chromosom... 620 e-177
>gnl|LJGI|TC58445 similar to UniRef100_A7QC03 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 916
Score = 1544 bits (779), Expect = 0.0
Identities = 800/803 (99%), Gaps = 3/803 (0%)
Strand = Plus / Plus
Query: 1 atggcggcctctgatcccaacaagttgatcgccaaagctgataagctaacaagactcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atggcggcctctgatcccaacaagttgatcgccaaagctgataagctaacaagactcagt 171
Query: 61 ctcacgaggtggaatgcagattggagaaatgctactgttctttatgagcaggctgcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ctcacgaggtggaatgcagattggagaaatgctactgttctttatgagcaggctgcgaat 231
Query: 121 ggatttagacttgccaaggactatgagaaagccaaaattgcatttgagaaagcttcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ggatttagacttgccaaggactatgagaaagccaaaattgcatttgagaaagcttcaaaa 291
Query: 181 ggacaagagatgctttcttcaccttgggatgcagctaagcacatggaatctgccgctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggacaagagatgctttcttcaccttgggatgcagctaagcacatggaatctgccgctgcc 351
Query: 241 ctggccaaggaactgagcaactggagagaagctgcggacttctatagaaaggcatctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctggccaaggaactgagcaactggagagaagctgcggacttctatagaaaggcatctgag 411
Query: 301 ttgtacatggaatgtgacagaccacaacctgcatctgatgctcttggaaagggagcccgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttgtacatggaatgtgacagaccacaacctgcatctgatgctcttggaaagggagcccgt 471
Query: 361 gctttggaagatgccatgcctgaagaagctgttcagctatatgcagatgcttgtacaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gctttggaagatgccatgcctgaagaagctgttcagctatatgcagatgcttgtacaatt 531
Query: 421 cttgaagaggatggaaaggaacagatgacctttgatctatatcgcgctgccagtagtgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttgaagaggatggaaaggaacagatgacctttgatctatatcgcgctgccagtagtgtt 591
Query: 481 tatataaaacttgagaaatatacagacgccgcatctgtcatgttgaatttgggcttggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tatataaaacttgagaaatatacagacgccgcatctgtcatgttgaatttgggcttggca 651
Query: 541 gctgacaagtgtaatgctaccaacagtcagtgcaaggcataccttggtgcgattattatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gctgacaagtgtaatgctaccaacagtcagtgcaaggcataccttggtgcgattattatc 711
Query: 601 tacctttatgctcatgactttaagcaagcacagaaatgctataatgattgctctcagatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tacctttatgctcatgactttaagcaagcacagaaatgctataatgattgctctcagatt 771
Query: 661 gatgcttttctcagcagtgatcagagtcgttgtgctagcaagtttcttgctgcctacact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gatgcttttctcagcagtgatcagagtcgttgtgctagcaagtttcttgctgcctacact 831
Query: 721 gacggagacgttgaagaaatcaagcgcattgctcagtcaagcgctgtgtcccatcttgac 780
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 832 gacggagacgttgaagaaatcaagcgcattgctcagtcaagcgctgtgt-ccatcttga- 889
Query: 781 catgtaatcattaagcttgcaag 803
||||| |||||||||||||||||
Sbjct: 890 catgt-atcattaagcttgcaag 911
>gnl|LJGI|TC59034 similar to UniRef100_A7QC03 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 928
Score = 1346 bits (679), Expect = 0.0
Identities = 707/711 (99%), Gaps = 4/711 (0%)
Strand = Plus / Plus
Query: 178 aaaggacaagagatgctttcttcaccttgggatgcagctaagcacatggaatctgccgct 237
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3 aaaggacaagagatgctt-cttcac-ttgggatgcagctaagcacatggaatctgccgct 60
Query: 238 gccctggccaaggaactgagcaactggagagaagctgcggacttctatagaaaggcatct 297
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gcc-tggccaaggaactgagcaactg-agagaagctgcggacttctatagaaaggcatct 118
Query: 298 gagttgtacatggaatgtgacagaccacaacctgcatctgatgctcttggaaagggagcc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gagttgtacatggaatgtgacagaccacaacctgcatctgatgctcttggaaagggagcc 178
Query: 358 cgtgctttggaagatgccatgcctgaagaagctgttcagctatatgcagatgcttgtaca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cgtgctttggaagatgccatgcctgaagaagctgttcagctatatgcagatgcttgtaca 238
Query: 418 attcttgaagaggatggaaaggaacagatgacctttgatctatatcgcgctgccagtagt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 attcttgaagaggatggaaaggaacagatgacctttgatctatatcgcgctgccagtagt 298
Query: 478 gtttatataaaacttgagaaatatacagacgccgcatctgtcatgttgaatttgggcttg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtttatataaaacttgagaaatatacagacgccgcatctgtcatgttgaatttgggcttg 358
Query: 538 gcagctgacaagtgtaatgctaccaacagtcagtgcaaggcataccttggtgcgattatt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcagctgacaagtgtaatgctaccaacagtcagtgcaaggcataccttggtgcgattatt 418
Query: 598 atctacctttatgctcatgactttaagcaagcacagaaatgctataatgattgctctcag 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atctacctttatgctcatgactttaagcaagcacagaaatgctataatgattgctctcag 478
Query: 658 attgatgcttttctcagcagtgatcagagtcgttgtgctagcaagtttcttgctgcctac 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 attgatgcttttctcagcagtgatcagagtcgttgtgctagcaagtttcttgctgcctac 538
Query: 718 actgacggagacgttgaagaaatcaagcgcattgctcagtcaagcgctgtgtcccatctt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 actgacggagacgttgaagaaatcaagcgcattgctcagtcaagcgctgtgtcccatctt 598
Query: 778 gaccatgtaatcattaagcttgcaaggaaacttccgacaggtgatgtgagtggatttaag 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaccatgtaatcattaagcttgcaaggaaacttccgacaggtgatgtgagtggatttaag 658
Query: 838 actgccactgctgaagatgatgagcagctggacgaagatgacctgacttaa 888
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 actgccactgctgaagatgatgagcagctggacgaagatgacctgacttaa 709
>gnl|LJGI|FS343363 similar to UniRef100_A7QC03 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 654
Score = 686 bits (346), Expect = 0.0
Identities = 359/363 (98%), Gaps = 4/363 (1%)
Strand = Plus / Plus
Query: 1 atggcggcctctgatcccaacaagttgatcgccaaagctgataagctaacaagactcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atggcggcctctgatcccaacaagttgatcgccaaagctgataagctaacaagactcagt 171
Query: 61 ctcacgaggtggaatgcagattggagaaatgctactgttctttatgagcaggctgcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ctcacgaggtggaatgcagattggagaaatgctactgttctttatgagcaggctgcgaat 231
Query: 121 ggatttagacttgccaaggactatgagaaagccaaaattgcatttgagaaagcttcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ggatttagacttgccaaggactatgagaaagccaaaattgcatttgagaaagcttcaaaa 291
Query: 181 ggacaagagatgctttcttc----accttgggatgcagctaagcacatggaatctgccgc 236
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggacaagagatgctttcttcccagaccttgggatgcagctaagcacatggaatctgccgc 351
Query: 237 tgccctggccaaggaactgagcaactggagagaagctgcggacttctatagaaaggcatc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgccctggccaaggaactgagcaactggagagaagctgcggacttctatagaaaggcatc 411
Query: 297 tgagttgtacatggaatgtgacagaccacaacctgcatctgatgctcttggaaagggagc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgagttgtacatggaatgtgacagaccacaacctgcatctgatgctcttggaaagggagc 471
Query: 357 ccg 359
|||
Sbjct: 472 ccg 474
>gnl|LJGI|DC598559 similar to UniRef100_A7QC03 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 580
Score = 620 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 47 taacaagactcagtctcacgaggtggaatgcagattggagaaatgctactgttctttatg 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 taacaagactcagtctcacgaggtggaatgcagattggagaaatgctactgttctttatg 159
Query: 107 agcaggctgcgaatggatttagacttgccaaggactatgagaaagccaaaattgcatttg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agcaggctgcgaatggatttagacttgccaaggactatgagaaagccaaaattgcatttg 219
Query: 167 agaaagcttcaaaaggacaagagatgctttcttcaccttgggatgcagctaagcacatgg 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agaaagcttcaaaaggacaagagatgctttcttcaccttgggatgcagctaagcacatgg 279
Query: 227 aatctgccgctgccctggccaaggaactgagcaactggagagaagctgcggacttctata 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aatctgccgctgccctggccaaggaactgagcaactggagagaagctgcggacttctata 339
Query: 287 gaaaggcatctgagttgtacatggaatgtgacagaccacaacctgcatctgatgctcttg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaaaggcatctgagttgtacatggaatgtgacagaccacaacctgcatctgatgctcttg 399
Query: 347 gaaagggagcccg 359
|||||||||||||
Sbjct: 400 gaaagggagcccg 412