Miyakogusa Predicted Gene

Lj6g3v1104970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1104970.1 tr|A4RYQ1|A4RYQ1_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_32107,36.79,0.0000000000006,SUBFAMILY NOT NAMED,NULL;
VACUOLAR PROTEIN SORTING 54,NULL;
Vps54,Vps54-like,NODE_13018_length_2374_cov_61.317184.path2.1
         (478 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19490.2 | Symbols: ATVPS54, VPS54 | VPS54 | chr4:10616017-10...   605   e-173
AT4G19490.1 | Symbols: ATVPS54, VPS54 | VPS54 | chr4:10616017-10...   605   e-173

>AT4G19490.2 | Symbols: ATVPS54, VPS54 | VPS54 |
            chr4:10616017-10622934 FORWARD LENGTH=1034
          Length = 1034

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/476 (63%), Positives = 363/476 (76%), Gaps = 7/476 (1%)

Query: 1    MSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITQEFITA 60
            MS+NFRADVLREN EAVFAAC+  HGRWAKLLGVRA+LHP+LKLQEF++IY++TQEFIT+
Sbjct: 553  MSRNFRADVLRENTEAVFAACEVTHGRWAKLLGVRALLHPKLKLQEFMSIYDLTQEFITS 612

Query: 61   TEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMAKIKALLDQETWVEIDVPEEFQSIINIL 120
            TEKIGGRLG SIRGTLQSQAKAFVD QHESRM K+KA+LDQETW EIDVPEEFQSII+ L
Sbjct: 613  TEKIGGRLGSSIRGTLQSQAKAFVDSQHESRMTKLKAVLDQETWDEIDVPEEFQSIISSL 672

Query: 121  FSSDVLTSGNLNGTEEDNAHSYS-DNNADAVHSNAEHQVEQTNSIETSRKSAGSDGS--K 177
            F+S  L SG ++  + ++ HS     N      + +   E  N    S + +    +  K
Sbjct: 673  FASQRLISGKVDDADLNSYHSNRLPLNGSLTSGSGDQNSELRNEKSESSEGSVVSDAQVK 732

Query: 178  PLVDSVEPNRGNNRISSAQNNNV-EKDHKKSVSQALLYKGVGYHMVNCGLILLKMLSEYI 236
            P V      R    +SSA NN   +K H KS    L Y+GVGYHMVNCGLILLKMLSEYI
Sbjct: 733  PTVSPESLERSKAGVSSATNNQSNQKAHGKS---NLFYQGVGYHMVNCGLILLKMLSEYI 789

Query: 237  DMNNVLPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISF 296
            DMNN LP LSSE+V RV E+L+FFNTRTCQLVLGAGAMQVSGLKSI +KHLALASQVI F
Sbjct: 790  DMNNSLPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQVIDF 849

Query: 297  IHAIIPEIRQILFLKVPETRKSLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRG 356
             + IIPE R+ILF KVPETRK LL  EID+VAQD+++HRDEI++KLVQIMRERLL HL G
Sbjct: 850  TYTIIPETRRILFSKVPETRKPLLSVEIDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHG 909

Query: 357  LPQIVESWNRPEEADPQPSQFARSLTKEVGYLQRVLSRTLNDEDVHAIFRQVVIIFHSQI 416
            LP++VE WNRP + + Q  +FA  LT+EVGYL RVLS TL++ DV AIFRQV+ I H+Q 
Sbjct: 910  LPKVVEGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVISIIHTQT 969

Query: 417  SEAFSRFDISTSQAQNRLSRDIKHILQCIRSLPSGDLGKSDTPNWGQLDEFLVQRF 472
            S+  +  +IS+++A+ RL   ++ IL+CIRSLPS +  +SD PNWGQLDEF  + F
Sbjct: 970  SQTLTNLEISSTEAKKRLKLHVELILKCIRSLPSDNANQSDIPNWGQLDEFFAEHF 1025


>AT4G19490.1 | Symbols: ATVPS54, VPS54 | VPS54 |
            chr4:10616017-10622934 FORWARD LENGTH=1034
          Length = 1034

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/476 (63%), Positives = 363/476 (76%), Gaps = 7/476 (1%)

Query: 1    MSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITQEFITA 60
            MS+NFRADVLREN EAVFAAC+  HGRWAKLLGVRA+LHP+LKLQEF++IY++TQEFIT+
Sbjct: 553  MSRNFRADVLRENTEAVFAACEVTHGRWAKLLGVRALLHPKLKLQEFMSIYDLTQEFITS 612

Query: 61   TEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMAKIKALLDQETWVEIDVPEEFQSIINIL 120
            TEKIGGRLG SIRGTLQSQAKAFVD QHESRM K+KA+LDQETW EIDVPEEFQSII+ L
Sbjct: 613  TEKIGGRLGSSIRGTLQSQAKAFVDSQHESRMTKLKAVLDQETWDEIDVPEEFQSIISSL 672

Query: 121  FSSDVLTSGNLNGTEEDNAHSYS-DNNADAVHSNAEHQVEQTNSIETSRKSAGSDGS--K 177
            F+S  L SG ++  + ++ HS     N      + +   E  N    S + +    +  K
Sbjct: 673  FASQRLISGKVDDADLNSYHSNRLPLNGSLTSGSGDQNSELRNEKSESSEGSVVSDAQVK 732

Query: 178  PLVDSVEPNRGNNRISSAQNNNV-EKDHKKSVSQALLYKGVGYHMVNCGLILLKMLSEYI 236
            P V      R    +SSA NN   +K H KS    L Y+GVGYHMVNCGLILLKMLSEYI
Sbjct: 733  PTVSPESLERSKAGVSSATNNQSNQKAHGKS---NLFYQGVGYHMVNCGLILLKMLSEYI 789

Query: 237  DMNNVLPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISF 296
            DMNN LP LSSE+V RV E+L+FFNTRTCQLVLGAGAMQVSGLKSI +KHLALASQVI F
Sbjct: 790  DMNNSLPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQVIDF 849

Query: 297  IHAIIPEIRQILFLKVPETRKSLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRG 356
             + IIPE R+ILF KVPETRK LL  EID+VAQD+++HRDEI++KLVQIMRERLL HL G
Sbjct: 850  TYTIIPETRRILFSKVPETRKPLLSVEIDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHG 909

Query: 357  LPQIVESWNRPEEADPQPSQFARSLTKEVGYLQRVLSRTLNDEDVHAIFRQVVIIFHSQI 416
            LP++VE WNRP + + Q  +FA  LT+EVGYL RVLS TL++ DV AIFRQV+ I H+Q 
Sbjct: 910  LPKVVEGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVISIIHTQT 969

Query: 417  SEAFSRFDISTSQAQNRLSRDIKHILQCIRSLPSGDLGKSDTPNWGQLDEFLVQRF 472
            S+  +  +IS+++A+ RL   ++ IL+CIRSLPS +  +SD PNWGQLDEF  + F
Sbjct: 970  SQTLTNLEISSTEAKKRLKLHVELILKCIRSLPSDNANQSDIPNWGQLDEFFAEHF 1025