Miyakogusa Predicted Gene

Lj6g3v0927430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0927430.1 Non Characterized Hit- tr|C6SXQ0|C6SXQ0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,57.14,0.00000000000003,FAMILY NOT NAMED,NULL; Cytochrome b-561 /
ferric reductase transmem,Cytochrome b561/ferric
reductase,CUFF.58614.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g046760.1 | eukaryotic cytochrome b561 protein | HC | chr3...   364   e-101
Medtr4g096780.1 | eukaryotic cytochrome b561 protein | HC | chr4...   209   2e-54
Medtr4g096780.2 | eukaryotic cytochrome b561 protein | HC | chr4...   209   2e-54
Medtr5g097620.1 | auxin-responsive family protein | HC | chr5:42...    57   1e-08
Medtr8g009880.1 | auxin-responsive family protein | HC | chr8:24...    56   3e-08
Medtr8g009880.2 | auxin-responsive family protein | HC | chr8:24...    56   3e-08
Medtr7g051910.1 | auxin-responsive family protein | HC | chr7:18...    51   1e-06
Medtr2g026080.1 | auxin-responsive family protein | HC | chr2:94...    50   2e-06

>Medtr3g046760.1 | eukaryotic cytochrome b561 protein | HC |
           chr3:15506588-15509918 | 20130731
          Length = 250

 Score =  364 bits (934), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/255 (73%), Positives = 205/255 (80%), Gaps = 10/255 (3%)

Query: 1   MGFQQ-KLIAFLFQASLVFILFPLVIXXXXHEQQEIEGIHSRNKDNQIKMNPRLEFQITL 59
           MG QQ K I+FLFQA LV  LFPLV      E QEI G +S N DN IK++PRL+F+ITL
Sbjct: 5   MGIQQTKFISFLFQACLVLFLFPLV--SSSQEHQEILGANSTNNDNHIKLSPRLQFEITL 62

Query: 60  HGFLLWASMGFLMPLGILAIRLSNKEENPRRLRIVFYVHAILQMLAVLLATAGAIMSIKX 119
           HGFLLWASMGFLMP+GILAIRLSN+EENPR LRI+FYVH I Q++AVLLATAGAIMSIK 
Sbjct: 63  HGFLLWASMGFLMPIGILAIRLSNREENPRWLRILFYVHTIFQVIAVLLATAGAIMSIKN 122

Query: 120 XXXXXXXXHQRLGVALYGVIWLQVLVGIFRPQRGSKRRRVWFFAHWITGTAVSFLGVLNV 179
                   HQRLGVALYGVIWLQVLVGIFRPQRGSKRR VWFFAHWI GTAV+FLGVLNV
Sbjct: 123 FNNLFNNNHQRLGVALYGVIWLQVLVGIFRPQRGSKRRSVWFFAHWILGTAVTFLGVLNV 182

Query: 180 YIGLRAYQEKTSKGIRIWNILFTIQISLVVFFYLFQEKWAYIQKQGVILGNEMMTTPCQE 239
           YIGL AY EKTSKGIRIWNILFTIQISL+VFFYLFQEKW YIQKQ V L NE       +
Sbjct: 183 YIGLAAYHEKTSKGIRIWNILFTIQISLIVFFYLFQEKWVYIQKQRVNLSNE-------Q 235

Query: 240 SGQDDKEMVVKVDKC 254
           S  ++KEMV+K   C
Sbjct: 236 SLPNEKEMVLKAGTC 250


>Medtr4g096780.1 | eukaryotic cytochrome b561 protein | HC |
           chr4:38511677-38507721 | 20130731
          Length = 344

 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/225 (47%), Positives = 146/225 (64%), Gaps = 9/225 (4%)

Query: 33  QEIEGIHS-RNKDNQI-KMNPRLEFQITLHGFLLWASMGFLMPLGILAIRLSNKEE-NPR 89
           +E+   +S RN ++++ K+N +    I LHG LLW S+GFLMPLGIL IR SNK E   R
Sbjct: 29  KEVNQFNSQRNTNSKVHKVNHQKASDIALHGLLLWGSVGFLMPLGILTIRGSNKAEPGSR 88

Query: 90  RLRIVFYVHAILQMLAVLLATAGAIMSIKXXXXXXXXXHQRLGVALYGVIWLQVLVGIFR 149
           R RI+FY H   QML+VLLAT GA MS+          HQRLG+ALYG I +Q  +G FR
Sbjct: 89  RSRILFYFHVAFQMLSVLLATVGAAMSLIKFENSFDNNHQRLGLALYGAILVQAFIGFFR 148

Query: 150 PQRGSKRRRVWFFAHWITGTAVSFLGVLNVYIGLRAYQEKTSKGIRIWNILFTIQISLVV 209
           P RG K+R  W+F HWI GT VS +G++N++ GL+AY ++T K    W ILFT+++  + 
Sbjct: 149 PHRGKKQRSYWYFVHWILGTIVSLVGIINIFTGLKAYHKRTLKSTMFWTILFTVEVFFIG 208

Query: 210 FFYLFQEKWAYIQKQGVILGNEMMTT------PCQESGQDDKEMV 248
             YLFQ+K  Y++KQGVI G++  T       P ++  Q+ KEM+
Sbjct: 209 LIYLFQDKLEYMRKQGVIEGSDESTMSSYQDIPQRQQNQNQKEML 253


>Medtr4g096780.2 | eukaryotic cytochrome b561 protein | HC |
           chr4:38511793-38508259 | 20130731
          Length = 268

 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/225 (47%), Positives = 146/225 (64%), Gaps = 9/225 (4%)

Query: 33  QEIEGIHS-RNKDNQI-KMNPRLEFQITLHGFLLWASMGFLMPLGILAIRLSNKEE-NPR 89
           +E+   +S RN ++++ K+N +    I LHG LLW S+GFLMPLGIL IR SNK E   R
Sbjct: 29  KEVNQFNSQRNTNSKVHKVNHQKASDIALHGLLLWGSVGFLMPLGILTIRGSNKAEPGSR 88

Query: 90  RLRIVFYVHAILQMLAVLLATAGAIMSIKXXXXXXXXXHQRLGVALYGVIWLQVLVGIFR 149
           R RI+FY H   QML+VLLAT GA MS+          HQRLG+ALYG I +Q  +G FR
Sbjct: 89  RSRILFYFHVAFQMLSVLLATVGAAMSLIKFENSFDNNHQRLGLALYGAILVQAFIGFFR 148

Query: 150 PQRGSKRRRVWFFAHWITGTAVSFLGVLNVYIGLRAYQEKTSKGIRIWNILFTIQISLVV 209
           P RG K+R  W+F HWI GT VS +G++N++ GL+AY ++T K    W ILFT+++  + 
Sbjct: 149 PHRGKKQRSYWYFVHWILGTIVSLVGIINIFTGLKAYHKRTLKSTMFWTILFTVEVFFIG 208

Query: 210 FFYLFQEKWAYIQKQGVILGNEMMTT------PCQESGQDDKEMV 248
             YLFQ+K  Y++KQGVI G++  T       P ++  Q+ KEM+
Sbjct: 209 LIYLFQDKLEYMRKQGVIEGSDESTMSSYQDIPQRQQNQNQKEML 253


>Medtr5g097620.1 | auxin-responsive family protein | HC |
           chr5:42769653-42767943 | 20130731
          Length = 442

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)

Query: 59  LHGFLLWASMGFLMPLGILAIRLSNKEENPRRLRIV----FYVHAILQMLAVLLATAGAI 114
           +HG L   S G L+P G +  R        R  + +    FY HA +QM   +L T G  
Sbjct: 253 IHGVLNAISWGILLPTGAITARYL------RHFQTLGPSWFYAHAGIQMFGFILGTVGFG 306

Query: 115 MSI---KXXXXXXXXXHQRLGVALYGVIWLQVLVGIFRPQRGSKRRRVWFFAHWITGTAV 171
           + I   K         H++LG+A++ +  LQ L  +FRP   +K R+ W   H   G + 
Sbjct: 307 IGIQLGKMTPGVEYGLHRKLGIAVFCLGALQTLALLFRPNTTNKFRKYWKSYHHFVGYSC 366

Query: 172 SFLGVLNVYIGLR 184
             LG +NV+ G  
Sbjct: 367 VVLGFVNVFQGFE 379


>Medtr8g009880.1 | auxin-responsive family protein | HC |
           chr8:2452009-2453214 | 20130731
          Length = 401

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 13/133 (9%)

Query: 59  LHGFLLWASMGFLMPLGILAIRLSNKEENPRRLRIV----FYVHAILQMLAVLLATAGAI 114
           +HG L   S G L+P+G +  R        R ++ +    FY HA +Q+ A +L T G  
Sbjct: 213 IHGTLNAISWGILLPMGAITARYF------RHIQSLGPAWFYAHAGIQLFAFILGTVGFA 266

Query: 115 MSI---KXXXXXXXXXHQRLGVALYGVIWLQVLVGIFRPQRGSKRRRVWFFAHWITGTAV 171
           + I   +         H++LGVA++ +  LQ L  +FRP   +K R+ W   H   G + 
Sbjct: 267 IGIHLGQLSPGVEYSLHRKLGVAVFCLGALQTLALLFRPNARNKFRKYWKSYHHFVGYSC 326

Query: 172 SFLGVLNVYIGLR 184
             LG +NV+ G  
Sbjct: 327 VVLGFVNVFQGFE 339


>Medtr8g009880.2 | auxin-responsive family protein | HC |
           chr8:2452009-2453214 | 20130731
          Length = 401

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 13/133 (9%)

Query: 59  LHGFLLWASMGFLMPLGILAIRLSNKEENPRRLRIV----FYVHAILQMLAVLLATAGAI 114
           +HG L   S G L+P+G +  R        R ++ +    FY HA +Q+ A +L T G  
Sbjct: 213 IHGTLNAISWGILLPMGAITARYF------RHIQSLGPAWFYAHAGIQLFAFILGTVGFA 266

Query: 115 MSI---KXXXXXXXXXHQRLGVALYGVIWLQVLVGIFRPQRGSKRRRVWFFAHWITGTAV 171
           + I   +         H++LGVA++ +  LQ L  +FRP   +K R+ W   H   G + 
Sbjct: 267 IGIHLGQLSPGVEYSLHRKLGVAVFCLGALQTLALLFRPNARNKFRKYWKSYHHFVGYSC 326

Query: 172 SFLGVLNVYIGLR 184
             LG +NV+ G  
Sbjct: 327 VVLGFVNVFQGFE 339


>Medtr7g051910.1 | auxin-responsive family protein | HC |
           chr7:18216668-18218785 | 20130731
          Length = 394

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 58  TLHGFLLWASMGFLMPLGILAIRLSNKEENPRRLRIVFYVHAILQMLAVLLATAGAIMSI 117
            +HG L   S G L PLG++  R    +  P      FY+H   Q+ A ++  AG    +
Sbjct: 205 NIHGVLNIVSWGILFPLGVIIARY--MKIFPSADPAWFYIHIGCQLSAYIIGVAGWGTGL 262

Query: 118 KXXXXXXX---XXHQRLGVALYGVIWLQVLVGIFRPQRGSKRRRVWFFAHWITGTAVSFL 174
           K            H+ +G+ L+ +  +Q+     RP +  K R  W   H+  G A+  L
Sbjct: 263 KLGSESEGIQFSSHRNIGITLFCLATIQIFALFLRPSKDHKYRFYWNIYHYSFGYAIIIL 322

Query: 175 GVLNVYIGL 183
            ++N++ G 
Sbjct: 323 AIVNIFRGF 331


>Medtr2g026080.1 | auxin-responsive family protein | HC |
           chr2:9414194-9411663 | 20130731
          Length = 402

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 9/167 (5%)

Query: 60  HGFLLWASMGFLMPLGILAIRLSN--KEENPRRLRIVFYVHAILQMLAVLLATAGAIMSI 117
           HG L   S G LMPLG +  R     K  +P      FY+H   Q  A ++  AG    +
Sbjct: 213 HGVLNAISWGILMPLGAVIARYLKVFKSADP----AWFYLHVTCQSAAYIVGVAGWGTGL 268

Query: 118 K---XXXXXXXXXHQRLGVALYGVIWLQVLVGIFRPQRGSKRRRVWFFAHWITGTAVSFL 174
           K            H+ LG+ ++ +  LQV   + RP++  K R  W   HW  G A   +
Sbjct: 269 KLGSDSAGVTYSTHRTLGIVIFCLGTLQVFALLLRPKKDHKIRFYWNLYHWGVGYATIII 328

Query: 175 GVLNVYIGLRAYQEKTSKGIRIWNILFTIQISLVVFFYLFQEKWAYI 221
            ++N++ G  A +   +     W   +T  I+ +    +  E + +I
Sbjct: 329 SIINIFKGFEALEVSAADRYDNWKHAYTGIIAALGGVAVLLEAYTWI 375