Miyakogusa Predicted Gene

Lj6g3v0896500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0896500.1 Non Chatacterized Hit- tr|I1L2F4|I1L2F4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20931
PE,67.79,0,seg,NULL; SMAD/FHA domain,SMAD/FHA domain; SUBFAMILY NOT
NAMED,NULL; NUCLEAR INHIBITOR OF PROTEIN PH,CUFF.58447.1
         (380 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20550.1 | Symbols: DDL | SMAD/FHA domain-containing protein ...   294   6e-80
AT2G24410.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    87   2e-17
AT5G38840.1 | Symbols:  | SMAD/FHA domain-containing protein  | ...    72   8e-13
AT5G47790.1 | Symbols:  | SMAD/FHA domain-containing protein  | ...    50   3e-06

>AT3G20550.1 | Symbols: DDL | SMAD/FHA domain-containing protein  |
           chr3:7174695-7177600 REVERSE LENGTH=314
          Length = 314

 Score =  294 bits (753), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 138/190 (72%), Positives = 159/190 (83%), Gaps = 2/190 (1%)

Query: 192 DEHTNSRG-AEQMN-DDDSIXXXXXXXXXXXXXXXXXPSFELSGNLAAETNRFRGVTLLF 249
           DE +N+RG +E+ N ++DS+                 PSFELSG LA ETNR+RG+TLLF
Sbjct: 124 DEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGITLLF 183

Query: 250 NEPPEARKPDVKWRLYVFRGGEVLNEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHAV 309
           NEPPEARKP  +WRLYVF+ GE LNEPL +HRQSCYLFGRERR+ADIPTDHPSCSKQHAV
Sbjct: 184 NEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQHAV 243

Query: 310 IQFRQVETEQPDGMLSKQVRPYIMDLGSTNKTFLNESPIEPQRYYELREKDTIKFGNSSR 369
           IQ+R++E E+PDGM+ KQV+PYIMDLGSTNKT++NESPIEPQRYYEL EKDTIKFGNSSR
Sbjct: 244 IQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTYINESPIEPQRYYELFEKDTIKFGNSSR 303

Query: 370 EYVLLHENSA 379
           EYVLLHENSA
Sbjct: 304 EYVLLHENSA 313


>AT2G24410.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: SMAD/FHA domain-containing protein
           (TAIR:AT3G20550.1); Has 194 Blast hits to 194 proteins
           in 92 species: Archae - 0; Bacteria - 0; Metazoa - 118;
           Fungi - 33; Plants - 30; Viruses - 0; Other Eukaryotes -
           13 (source: NCBI BLink). | chr2:10379171-10379407
           REVERSE LENGTH=78
          Length = 78

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 48/66 (72%)

Query: 228 SFELSGNLAAETNRFRGVTLLFNEPPEARKPDVKWRLYVFRGGEVLNEPLYIHRQSCYLF 287
            FELS  LA ETN ++G+TLLFN P + RKP  +WRLY F+ GE L E L IH Q CYLF
Sbjct: 9   CFELSRKLAEETNIYKGITLLFNNPVDNRKPKERWRLYHFKDGEPLKETLCIHYQICYLF 68

Query: 288 GRERRV 293
           GRER++
Sbjct: 69  GRERKI 74


>AT5G38840.1 | Symbols:  | SMAD/FHA domain-containing protein  |
           chr5:15551329-15554846 FORWARD LENGTH=735
          Length = 735

 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 14/113 (12%)

Query: 261 KWRLYVFRGGEVLNEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVETEQP 320
           +++L V + G ++ E L ++++  YLFGR+  + D   +HPS S+ HAVIQ++       
Sbjct: 102 QFQLEVLKEGAIV-EKLDVYKKGAYLFGRDG-ICDFALEHPSISRFHAVIQYK------- 152

Query: 321 DGMLSKQVRPYIMDLGSTNKTFLNESPIEPQRYYELREKDTIKFGNSSREYVL 373
                +    YI DLGST+ T +N++ ++ + + +L   D I+FG S+R Y+ 
Sbjct: 153 -----RSGAAYIFDLGSTHGTTVNKNKVDKKVFVDLNVGDVIRFGGSTRLYIF 200


>AT5G47790.1 | Symbols:  | SMAD/FHA domain-containing protein  |
           chr5:19351396-19352579 FORWARD LENGTH=369
          Length = 369

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 15/117 (12%)

Query: 262 WRLYVFRGGEVLNEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVETEQPD 321
           + L V + G++L+  +++ R+  ++FGR+ +  D   DH S S+QHA +           
Sbjct: 66  YSLEVVKDGQILDR-IHLDRRR-HIFGRQHQTCDFVLDHQSVSRQHAAV----------- 112

Query: 322 GMLSKQVRPYIMDLGSTNKTFLNESPIEPQRYYELREKDTIKFGNSSREYVLLHENS 378
            +  K    +++DLGS + TF+    +      EL    +++F  S+R Y LL +NS
Sbjct: 113 -VPHKNGSIFVIDLGSAHGTFVANERLTKDTPVELEVGQSLRFAASTRIY-LLRKNS 167