Miyakogusa Predicted Gene

Lj6g3v0657700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0657700.1 Non Chatacterized Hit- tr|I1KYS4|I1KYS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11253
PE,90.57,0,seg,NULL; ARM repeat,Armadillo-type fold; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no descri,CUFF.58144.1
         (678 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13330.1 | Symbols: PA200 | proteasome activating protein 200...   933   0.0  

>AT3G13330.1 | Symbols: PA200 | proteasome activating protein 200 |
            chr3:4319804-4330061 REVERSE LENGTH=1816
          Length = 1816

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/678 (67%), Positives = 536/678 (79%), Gaps = 1/678 (0%)

Query: 1    MANRVLLLLALASRNHPSSSSKILSETAGHFLKNLKSQLPQTRILAISALNTLLKESPYK 60
            MANRVLLLL ++SR  PS S KIL ETAGHFLKNLKSQLPQTRILAISALN LLKESP+K
Sbjct: 1140 MANRVLLLLVMSSRIDPSFSLKILDETAGHFLKNLKSQLPQTRILAISALNILLKESPHK 1199

Query: 61   LSPGEKSAVVEDLQGNIKSSLEGTLTQTFEEEGFFNETLTSLSHVHIITDSESASRGNHG 120
            +   ++ +V      N  SSL+  L+Q F EEGFF ET  SLSH+HI TD++S+SRGNHG
Sbjct: 1200 MQGKDQPSVSSQETENANSSLDLALSQIFREEGFFKETFESLSHIHI-TDTDSSSRGNHG 1258

Query: 121  DSSFQSLADKSITRFYFEFSASWPRTPSWISFLGNDIFYSSFARIFKRLVQECGMPVVLA 180
             SSFQS+ADKSITRFYFEFSASWPRTPSWIS LG+DIFY SFARIFKRL QECG+PV+LA
Sbjct: 1259 SSSFQSMADKSITRFYFEFSASWPRTPSWISLLGSDIFYPSFARIFKRLAQECGVPVLLA 1318

Query: 181  LKGAVDEFTIAKERSKQCVAAEALAGVLHSDIDGLSGAWESWLMPQLKNIILTQSVESVP 240
            LK  ++EF  AKER KQCVAAEALAGVLHSD++GL   W+SW+M QL+N+IL QSVES+P
Sbjct: 1319 LKSPLEEFCNAKERPKQCVAAEALAGVLHSDVNGLFNEWDSWIMVQLQNVILGQSVESIP 1378

Query: 241  EWASCIRYAVTGKGKYGTRVPLLRQKILDSLMEXXXXXXXXXXXAKRYAFLAAALIEISP 300
            EWA+CIRYAVTGKGK GT++P++RQ+ILD ++            AKRYAFL+AALIE+SP
Sbjct: 1379 EWAACIRYAVTGKGKQGTKIPVMRQQILDCIVAPLPPTATTTVVAKRYAFLSAALIELSP 1438

Query: 301  QRMPVAEIQLHNTLLKEVLGNMCHSSAQVREALGVTLSVLFSNIRLCHSSYNANACDERN 360
             +MPV E++LH  LL E++ NM HSSAQ+REA+GV LSVL SNIRL  S       +E  
Sbjct: 1439 PKMPVTEVKLHIVLLDELICNMSHSSAQIREAIGVILSVLCSNIRLRMSYQQEYPTEEGK 1498

Query: 361  NNVDSLMEDKSWVKFLTERAAEAVVNIQTATQSDKAVNPMDTSSQNGHLDGDSQDDMKWM 420
             +VDS +++++W K ++ +A+EAV NIQ A+ SD      D    N   +GDS DD+KWM
Sbjct: 1499 TDVDSQLKEENWFKLISAKASEAVKNIQQASISDSLDTSTDVDMGNAQSNGDSLDDVKWM 1558

Query: 421  ETLLHFIISSLKSGRSSYLLDVIVGLLYPVISLQETSNKDLSTLAKAAFELLKWMVVWEP 480
            ETL HFIISS KSGR+SYLLDVI G LYPV+SLQETS+KDLS LAKAAFELLKW V  E 
Sbjct: 1559 ETLFHFIISSFKSGRASYLLDVIAGFLYPVMSLQETSHKDLSILAKAAFELLKWRVFPES 1618

Query: 481  HLQKAISVILSAANDSNWRTRSATLTYLRTFMYRHTFILSSSKKQEIWSTVEKLLIDNQV 540
            HLQK I VILS+A+DSNWR RS+TLTYLRTFMYRHTFIL+   KQ+IW TVEKLL+D+QV
Sbjct: 1619 HLQKVIGVILSSADDSNWRIRSSTLTYLRTFMYRHTFILTHEDKQKIWKTVEKLLVDSQV 1678

Query: 541  EVREHAAAVLAGLMKGGDEDLAKDFRDRAYLEANSVHRRRKLRNASSGPXXXXXXXXXXX 600
            EVREHAAAVLAGLMKGGDED A DFRDR+Y EANS+ +RR  R +SS             
Sbjct: 1679 EVREHAAAVLAGLMKGGDEDFAADFRDRSYAEANSIQKRRNRRKSSSTQSIAGVHGAVLG 1738

Query: 601  XXXXXXXXPYDMPSWLPEHITLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFT 660
                    PYDMPSWLPEH+TLLARF+GEP+P+KSTVTKAVAEFRRTHADTWN+QK+ FT
Sbjct: 1739 LVASVLSVPYDMPSWLPEHVTLLARFAGEPTPIKSTVTKAVAEFRRTHADTWNIQKDSFT 1798

Query: 661  EEQLEILADTSSSSSYFA 678
            E+QLEILADTSSSSSYFA
Sbjct: 1799 EDQLEILADTSSSSSYFA 1816