Miyakogusa Predicted Gene

Lj6g3v0657700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0657700.1 Non Chatacterized Hit- tr|I1KYS4|I1KYS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11253
PE,90.57,0,seg,NULL; ARM repeat,Armadillo-type fold; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no descri,CUFF.58144.1
         (2037 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80058 similar to UniRef100_Q5Z876 Cluster: Proteasome...   672   0.0  

>gnl|LJGI|TC80058 similar to UniRef100_Q5Z876 Cluster: Proteasome activator subunit
            4-like; n=1; Oryza sativa Japonica Group|Rep: Proteasome
            activator subunit 4-like - Oryza sativa subsp. japonica
            (Rice), partial (6%)
          Length = 522

 Score =  672 bits (339), Expect = 0.0
 Identities = 348/351 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1687 aaagatttccgtgatagagcttatttggaagcaaatagtgtacacaggagaagaaaattg 1746
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1    aaagatttccgtgatagagcttatttggaagccaatagtgtacacaggagaagaaaattg 60

                                                                        
Query: 1747 agaaatgcaagttctggtccatctgtagcatctgttcatggtgctgtactagctttggca 1806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agaaatgcaagttctggtccatctgtagcatctgttcatggtgctgtactagctttggca 120

                                                                        
Query: 1807 gcttctgtattatcagccccatatgacatgcccagttggttgcccgagcatattacactg 1866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcttctgtattatcagccccatatgacatgcccagttggttgcccgagcatattacactg 180

                                                                        
Query: 1867 ctagctcgctttagtggggagccatctcctgtgaaatctacagtgacaaaagcagttgct 1926
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181  ctagctcgctttagtggggagccatctcctgtgaaatctacagtgaccaaagcagttgct 240

                                                                        
Query: 1927 gagttccggcggacacatgctgatacatggaatgttcagaaggagttatttactgaagag 1986
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gagttccggcggacacatgctgatacatggaatgttcagaaggagttatttactgaagag 300

                                                               
Query: 1987 caacttgagattctggcagatacatcctcttcatcatcgtactttgcgtga 2037
            | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ccacttgagattctggcagatacatcctcttcatcatcgtactttgcgtga 351