Miyakogusa Predicted Gene
- Lj6g3v0528530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0528530.1 Non Chatacterized Hit- tr|I1K4J2|I1K4J2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,99.52,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Ras subfamily of
RAS small GTPases,Small ,CUFF.58037.1
(627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63490 homologue to UniRef100_A7R6U5 Cluster: Chromoso... 1116 0.0
gnl|LJGI|BW596180 homologue to UniRef100_A7R6U5 Cluster: Chromos... 759 0.0
gnl|LJGI|TC64605 homologue to UniRef100_A7R6U5 Cluster: Chromoso... 694 0.0
gnl|LJGI|GO031458 homologue to UniRef100_Q4ABP5 Cluster: 80A08_2... 549 e-156
gnl|LJGI|TC60832 homologue to UniRef100_Q40525 Cluster: Nt-rab6 ... 210 8e-54
gnl|LJGI|TC61276 homologue to UniRef100_Q40525 Cluster: Nt-rab6 ... 56 3e-07
>gnl|LJGI|TC63490 homologue to UniRef100_A7R6U5 Cluster: Chromosome undetermined
scaffold_1427, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1427,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (92%)
Length = 736
Score = 1116 bits (563), Expect = 0.0
Identities = 598/603 (99%), Gaps = 5/603 (0%)
Strand = Plus / Plus
Query: 1 atggcgacggtgtcccctctcgccaaatacaagctcgttttcctcggcgatcaatcggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggcgacggtgtcccctctcgccaaatacaagctcgttttcctcggcgatcaatcggtt 195
Query: 61 ggcaaaaccagcatcatcacccgcttcatgtacgacaaattcgacacaacctatcaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ggcaaaaccagcatcatcacccgcttcatgtacgacaaattcgacacaacctatcaggct 255
Query: 121 actattggtattgactttttgtcaaagacaatgtaccttgaagatagaactgttcgcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 actattggtattgactttttgtcaaagacaatgtaccttgaagatagaactgttcgcttg 315
Query: 181 cagctttgggatactgcagggcaagaaagatttagaagtctcattccaagctacataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cagctttgggatactgcagggcaagaaagatttagaagtctcattccaagctacataaga 375
Query: 241 gattcttctgttgcagttattgtatatgatgtagctaacaggcaatcatttctgaacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gattcttctgttgcagttattgtatatgatgtagctaacaggcaatcatttctgaacact 435
Query: 301 aacaagtgggttgaggaggtacgtacagagcgcggcagtgacgttattattgtcttggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aacaagtgggttgaggaggtacgtacagagcgcggcagtgacgttattattgtcttggtt 495
Query: 361 ggaaacaaaactgatcttgttgataaaaggcaagtttctatagaggaaggagatgccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggaaacaaaactgatcttgttgataaaaggcaagtttctatagaggaaggagatgccaag 555
Query: 421 tctcgtgagtttggaatcatgttcatagaaaccagtgcaaaagcaggcttcaatatcaag 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 556 tctcgtgagtttggaatcatgttcatagaaaccagtgcaaaagca-gcttcaatatcaag 614
Query: 481 cctttgtttcgtaaaattgctgctgcgttgcctggaatggaaacactttcttctacaaaa 540
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 615 cctttgtttcgtaaaattgctgctgcgttgcctgg-atggaaacactttcttctac-aaa 672
Query: 541 caggaagacatggtcgacgtaaatttaaaaccgacggtgaattcatcccagacagagcag 600
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 673 ca-gaagacatggtcgacgtaaatttaaaaccgac-gtgaattcatcccagacagagcag 730
Query: 601 caa 603
|||
Sbjct: 731 caa 733
>gnl|LJGI|BW596180 homologue to UniRef100_A7R6U5 Cluster: Chromosome undetermined
scaffold_1427, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1427,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (61%)
Length = 486
Score = 759 bits (383), Expect = 0.0
Identities = 383/383 (100%)
Strand = Plus / Plus
Query: 245 cttctgttgcagttattgtatatgatgtagctaacaggcaatcatttctgaacactaaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cttctgttgcagttattgtatatgatgtagctaacaggcaatcatttctgaacactaaca 71
Query: 305 agtgggttgaggaggtacgtacagagcgcggcagtgacgttattattgtcttggttggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agtgggttgaggaggtacgtacagagcgcggcagtgacgttattattgtcttggttggaa 131
Query: 365 acaaaactgatcttgttgataaaaggcaagtttctatagaggaaggagatgccaagtctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 acaaaactgatcttgttgataaaaggcaagtttctatagaggaaggagatgccaagtctc 191
Query: 425 gtgagtttggaatcatgttcatagaaaccagtgcaaaagcaggcttcaatatcaagcctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gtgagtttggaatcatgttcatagaaaccagtgcaaaagcaggcttcaatatcaagcctt 251
Query: 485 tgtttcgtaaaattgctgctgcgttgcctggaatggaaacactttcttctacaaaacagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtttcgtaaaattgctgctgcgttgcctggaatggaaacactttcttctacaaaacagg 311
Query: 545 aagacatggtcgacgtaaatttaaaaccgacggtgaattcatcccagacagagcagcaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aagacatggtcgacgtaaatttaaaaccgacggtgaattcatcccagacagagcagcaag 371
Query: 605 gaggaggttgctcatgctagaga 627
|||||||||||||||||||||||
Sbjct: 372 gaggaggttgctcatgctagaga 394
>gnl|LJGI|TC64605 homologue to UniRef100_A7R6U5 Cluster: Chromosome undetermined
scaffold_1427, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1427,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (55%)
Length = 982
Score = 694 bits (350), Expect = 0.0
Identities = 350/350 (100%)
Strand = Plus / Plus
Query: 278 acaggcaatcatttctgaacactaacaagtgggttgaggaggtacgtacagagcgcggca 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 acaggcaatcatttctgaacactaacaagtgggttgaggaggtacgtacagagcgcggca 166
Query: 338 gtgacgttattattgtcttggttggaaacaaaactgatcttgttgataaaaggcaagttt 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gtgacgttattattgtcttggttggaaacaaaactgatcttgttgataaaaggcaagttt 226
Query: 398 ctatagaggaaggagatgccaagtctcgtgagtttggaatcatgttcatagaaaccagtg 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ctatagaggaaggagatgccaagtctcgtgagtttggaatcatgttcatagaaaccagtg 286
Query: 458 caaaagcaggcttcaatatcaagcctttgtttcgtaaaattgctgctgcgttgcctggaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 caaaagcaggcttcaatatcaagcctttgtttcgtaaaattgctgctgcgttgcctggaa 346
Query: 518 tggaaacactttcttctacaaaacaggaagacatggtcgacgtaaatttaaaaccgacgg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tggaaacactttcttctacaaaacaggaagacatggtcgacgtaaatttaaaaccgacgg 406
Query: 578 tgaattcatcccagacagagcagcaaggaggaggttgctcatgctagaga 627
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tgaattcatcccagacagagcagcaaggaggaggttgctcatgctagaga 456
>gnl|LJGI|GO031458 homologue to UniRef100_Q4ABP5 Cluster: 80A08_22; n=1; Brassica rapa
subsp. pekinensis|Rep: 80A08_22 - Brassica rapa subsp.
pekinensis (Chinese cabbage), partial (45%)
Length = 833
Score = 549 bits (277), Expect = e-156
Identities = 277/277 (100%)
Strand = Plus / Plus
Query: 1 atggcgacggtgtcccctctcgccaaatacaagctcgttttcctcggcgatcaatcggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atggcgacggtgtcccctctcgccaaatacaagctcgttttcctcggcgatcaatcggtt 193
Query: 61 ggcaaaaccagcatcatcacccgcttcatgtacgacaaattcgacacaacctatcaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggcaaaaccagcatcatcacccgcttcatgtacgacaaattcgacacaacctatcaggct 253
Query: 121 actattggtattgactttttgtcaaagacaatgtaccttgaagatagaactgttcgcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 actattggtattgactttttgtcaaagacaatgtaccttgaagatagaactgttcgcttg 313
Query: 181 cagctttgggatactgcagggcaagaaagatttagaagtctcattccaagctacataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cagctttgggatactgcagggcaagaaagatttagaagtctcattccaagctacataaga 373
Query: 241 gattcttctgttgcagttattgtatatgatgtagcta 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 374 gattcttctgttgcagttattgtatatgatgtagcta 410
>gnl|LJGI|TC60832 homologue to UniRef100_Q40525 Cluster: Nt-rab6 protein; n=1;
Nicotiana tabacum|Rep: Nt-rab6 protein - Nicotiana
tabacum (Common tobacco), partial (98%)
Length = 774
Score = 210 bits (106), Expect = 8e-54
Identities = 205/238 (86%)
Strand = Plus / Plus
Query: 17 ctctcgccaaatacaagctcgttttcctcggcgatcaatcggttggcaaaaccagcatca 76
|||| ||||| |||||||| || ||| | ||||||||||| || ||||||||||||||||
Sbjct: 120 ctcttgccaagtacaagctggtgttcttgggcgatcaatccgtcggcaaaaccagcatca 179
Query: 77 tcacccgcttcatgtacgacaaattcgacacaacctatcaggctactattggtattgact 136
|||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 180 tcactcgcttcatgtacgacaaattcgacaacacctatcaggctactataggtattgatt 239
Query: 137 ttttgtcaaagacaatgtaccttgaagatagaactgttcgcttgcagctttgggatactg 196
|| ||||||| || ||||| ||||||||| |||| ||||| ||||| | ||||||||||
Sbjct: 240 ttctgtcaaaaactatgtatcttgaagatcgaacagttcggctgcagttgtgggatactg 299
Query: 197 cagggcaagaaagatttagaagtctcattccaagctacataagagattcttctgttgc 254
| || || |||||||| |||||||| |||||||| ||||| || || || ||||||||
Sbjct: 300 ctggacaggaaagattcagaagtcttattccaagttacattagggactcatctgttgc 357
>gnl|LJGI|TC61276 homologue to UniRef100_Q40525 Cluster: Nt-rab6 protein; n=1;
Nicotiana tabacum|Rep: Nt-rab6 protein - Nicotiana
tabacum (Common tobacco), partial (62%)
Length = 746
Score = 56.0 bits (28), Expect = 3e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 454 agtgcaaaagcaggcttcaatatcaagcctttgtttcgtaaaattgctgctgcgttgcct 513
||||| ||||| ||||| ||||| ||| | | ||||| |||||||||||||| || |||
Sbjct: 304 agtgccaaagctggctttaatataaaggccctctttcgaaaaattgctgctgcattacct 363
Query: 514 ggaatggaaacactttcttctacaaaacaggaagacatggtcga 557
||||||||||| | || | |||||||| ||||| ||||||||
Sbjct: 364 ggaatggaaaccttatcaaccacaaaacaagaagatatggtcga 407
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 17 ctctcgccaaatacaagctcgttttcctcggcgatcaatcggttggcaaaaccagcatca 76
|||| ||||| ||||||| || ||| | ||||||||||| || ||||||||||||||||
Sbjct: 91 ctcttgccaagtacaagcaggtgttcttgggcgatcaatccgtcggcaaaaccagcatca 150
Query: 77 tca 79
|||
Sbjct: 151 tca 153