Miyakogusa Predicted Gene

Lj6g3v0467170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0467170.1 Non Characterized Hit- tr|H0VGM6|H0VGM6_CAVPO
Uncharacterized protein OS=Cavia porcellus GN=ENGASE
P,44.44,3e-19,Glyco_hydro_85,Glycoside hydrolase, family 85; SUBFAMILY
NOT NAMED,NULL; ENDO BETA N-ACETYLGLUCOSAMI,CUFF.58141.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g071610.1 | cytosolic endo-beta-N-acetylglucosaminidase | ...   236   1e-62

>Medtr3g071610.1 | cytosolic endo-beta-N-acetylglucosaminidase | HC
           | chr3:32159920-32153697 | 20130731
          Length = 710

 Score =  236 bits (601), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/191 (64%), Positives = 135/191 (70%), Gaps = 12/191 (6%)

Query: 1   MISRLLRAYINRQFLIFLRNTLHFLLQQIQNLFLTMXXXXXXXXXXXXXXXXXXXXXFDP 60
           M  R L  YINRQFLI +RN L F+ Q  QNL ++                      FDP
Sbjct: 1   MNPRHLEPYINRQFLIKIRNILRFISQTTQNLTMSTPNPNSSSSPSPSPP-------FDP 53

Query: 61  TQPSVPISYPIKTLQELESRSYFESFHYPFNKASVPISDGVSFSLPNRRRLLVCHDMAGG 120
            QPS+PISYPIKTLQELESRSYF+SFHYPFNKASVPIS   S  LP+RRRLLVCHDMAGG
Sbjct: 54  KQPSIPISYPIKTLQELESRSYFDSFHYPFNKASVPISS-SSSKLPDRRRLLVCHDMAGG 112

Query: 121 YLDDKWVQGGANPDAYAIWHWHLIDVFVYFSHDLVTLPPPCWTNTAHRHGVKV-GTLL-- 177
           Y DDKW+QGG N +AY+IWHWHLIDVFVYFSHDLVTLPP CW NTAHRHGVKV GT +  
Sbjct: 113 YSDDKWIQGGDNVNAYSIWHWHLIDVFVYFSHDLVTLPPVCWINTAHRHGVKVLGTFITE 172

Query: 178 -DSALLSCRQL 187
            D    +C  L
Sbjct: 173 WDEGKANCDVL 183