Miyakogusa Predicted Gene

Lj6g3v0467170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0467170.1 Non Chatacterized Hit- tr|H0VGM6|H0VGM6_CAVPO
Uncharacterized protein OS=Cavia porcellus GN=ENGASE
P,44.44,3e-19,Glyco_hydro_85,Glycoside hydrolase, family 85; SUBFAMILY
NOT NAMED,NULL; ENDO BETA N-ACETYLGLUCOSAMI,CUFF.58141.1
         (203 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05460.1 | Symbols:  | Glycosyl hydrolase family 85  | chr5:1...   190   7e-49
AT3G11040.1 | Symbols:  | Glycosyl hydrolase family 85  | chr3:3...   183   6e-47

>AT5G05460.1 | Symbols:  | Glycosyl hydrolase family 85  |
           chr5:1615615-1618771 FORWARD LENGTH=680
          Length = 680

 Score =  190 bits (482), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 88/131 (67%), Positives = 106/131 (80%), Gaps = 5/131 (3%)

Query: 61  TQPSVPISYPIKTLQELESRSYFESFHYPFNKASVPISDGVSFSLPNRRRLLVCHDMAGG 120
           T+PS PIS+PIKTLQ+L+SRSYF+SFHYPFN++SVP+   +  +L +R RLLVCHDM GG
Sbjct: 16  TKPSTPISFPIKTLQDLKSRSYFDSFHYPFNRSSVPLRRNIG-ALSDRPRLLVCHDMKGG 74

Query: 121 YLDDKWVQGGANPDAYAIWHWHLIDVFVYFSHDLVTLPPPCWTNTAHRHGVKV-GTLL-- 177
           Y+DDKWVQG  N   YAIW W+L+DVFVYFSH LVTLPPPCWTNTAHRHGVKV GT +  
Sbjct: 75  YVDDKWVQGCGNNAGYAIWDWYLMDVFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITE 134

Query: 178 -DSALLSCRQL 187
            D    +C++L
Sbjct: 135 WDEGKATCKEL 145


>AT3G11040.1 | Symbols:  | Glycosyl hydrolase family 85  |
           chr3:3460143-3463312 FORWARD LENGTH=701
          Length = 701

 Score =  183 bits (465), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 83/134 (61%), Positives = 105/134 (78%), Gaps = 5/134 (3%)

Query: 58  FDPTQPSVPISYPIKTLQELESRSYFESFHYPFNKASVPISDGVSFSLPNRRRLLVCHDM 117
            D  +PS+PIS+PIK LQ+L+SRSYF+SFH+ FN+++VP     S  LPNR R+LVCHDM
Sbjct: 18  LDLVKPSLPISFPIKALQDLKSRSYFDSFHFQFNRSTVPFRRN-SDCLPNRPRVLVCHDM 76

Query: 118 AGGYLDDKWVQGGANPDAYAIWHWHLIDVFVYFSHDLVTLPPPCWTNTAHRHGVKV-GTL 176
            GGY+DDKWVQG  N   +AIWHW+L+D+FVYFSH LVT+PPPCWTNTAHRHGVKV GT 
Sbjct: 77  KGGYVDDKWVQGCENEAGFAIWHWYLMDIFVYFSHSLVTIPPPCWTNTAHRHGVKVLGTF 136

Query: 177 L---DSALLSCRQL 187
           +   D    +C+++
Sbjct: 137 ITEWDEGKATCKEM 150