Miyakogusa Predicted Gene

Lj6g3v0467170.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0467170.1 Non Chatacterized Hit- tr|H0VGM6|H0VGM6_CAVPO
Uncharacterized protein OS=Cavia porcellus GN=ENGASE
P,44.44,3e-19,Glyco_hydro_85,Glycoside hydrolase, family 85; SUBFAMILY
NOT NAMED,NULL; ENDO BETA N-ACETYLGLUCOSAMI,CUFF.58141.1
         (613 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81108 similar to UniRef100_A7Q3P1 Cluster: Chromosome...   476   e-134

>gnl|LJGI|TC81108 similar to UniRef100_A7Q3P1 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 252

 Score =  476 bits (240), Expect = e-134
 Identities = 250/252 (99%), Gaps = 1/252 (0%)
 Strand = Plus / Plus

                                                                       
Query: 93  cctcttcctcaccatgtcaaaccccaaatccgaagcaaaacccgaaccctcttcttcttc 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cctcttcctcaccatgtcaaaccccaaatccgaagcaaaacccgaaccctcttcttcttc 60

                                                                       
Query: 153 ttctgaatctccaccacccttcgatcctacacaaccctcggttccaatttcatacccaat 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttctgaatctccaccacccttcgatcctacacaaccctcggttccaatttcatacccaat 120

                                                                       
Query: 213 caagacccttcaggagcttgaatctcggtcctattttgaatcctttcactaccctttcaa 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagacccttcaggagcttgaatctcggtcctattttgaatcctttcactaccctttcaa 180

                                                                       
Query: 273 caaagcatcggttccaatttccgatggggtttctttttcgttgcccaatcggcg-taggt 331
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 181 caaagcatcggttccaatttccgatggggtttcttcttcgttgcccaatcggcgntaggt 240

                       
Query: 332 tgctcgtgtgcc 343
           ||||||||||||
Sbjct: 241 tgctcgtgtgcc 252