Miyakogusa Predicted Gene

Lj6g3v0389100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0389100.1 Non Chatacterized Hit- tr|E1Z2C1|E1Z2C1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,26.32,1e-16,DOWNSTREAM NEIGHBOR OF SON,Donson;
seg,NULL,CUFF.57756.1
         (592 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54750.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   438   e-123
AT3G54750.1 | Symbols:  | unknown protein; Has 145 Blast hits to...   435   e-122
AT3G54750.2 | Symbols:  | unknown protein; Has 145 Blast hits to...   435   e-122

>AT3G54750.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 15 growth stages. |
           chr3:20264833-20268416 REVERSE LENGTH=590
          Length = 590

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/616 (42%), Positives = 349/616 (56%), Gaps = 61/616 (9%)

Query: 8   RSMVKRKTPLELRGEQLKRASLKDLTNESTPPLASSTNATEGRRGFKKQGSFETPRYTDT 67
           + + KRKTP ELRGEQLKR +  D   E+   L    ++ E   GFKK    + P+Y + 
Sbjct: 3   KVVAKRKTPSELRGEQLKRTAFVDQAKEAFDALRPCKSSAERENGFKKSELSKNPKYIEM 62

Query: 68  QLDEVFAAKKSRFRVASGKENAKENPCLGKTSNLKNLLGFSTLDAKRQQGATCLTNSVAS 127
           ++DE++  KK+R  + SGKEN+KEN    ++S+L N+   S L A ++Q      N  AS
Sbjct: 63  RMDELYPVKKARPWMLSGKENSKENGA-KQSSSLINVSLLSNLAATKRQLIREENN--AS 119

Query: 128 SEVRKVGLLQACQTNENCSQGKFLSVAEISSVADRSSGLAASIDMGKALRGLAALEPRVD 187
           +EV      +A QTNE CSQ  F SV ++S+  +  S L   IDM KAL+GLA  EP + 
Sbjct: 120 TEVPDDTKAEARQTNERCSQSIFRSVTQLSTRGEELSCLP-DIDMNKALKGLATCEPLLV 178

Query: 188 NGLADDSSERRGDLKSTVKGSFFSECHVPGQKAPLDLTLKTNMRIVSSSSVNW---SAMR 244
           +   D + E   D  +++ GSF SE  V GQK PLDL+LKT  R+VSSS ++W   S M 
Sbjct: 179 HP-GDITGE---DDTASLSGSFMSEFQVSGQKIPLDLSLKTYARLVSSSPLSWLHRSIMG 234

Query: 245 GTMRGSNGFKDL---------------------------HSWMYXXXXXXXXXXXXXXXX 277
            T  G    K L                           HSW+Y                
Sbjct: 235 STYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWVYPQSTLPPFVISAMVAS 294

Query: 278 TVD-GELEFLRKRQVAWEESFRDLYYMLRNNICGLFYVCTSQFVVMFTGGDSSRRSKCSI 336
             D GE++FL+KR++AWE++FR LY+M R N+C +FYVCTSQFV MFTG   S  +K S 
Sbjct: 295 VSDRGEVDFLQKRKLAWEDAFRSLYFMFRKNLCKVFYVCTSQFVAMFTGSCESGGAKRSC 354

Query: 337 NAYISRSTMGLRSLLKEHDLCFYMPLCHSKVELVATESLAELLEIEKQNLGQTRRSRSFS 396
           N YI++ST  LR++LK  D+C+ MPLC +K++    E LAEL E+E  N+GQ RRSRS S
Sbjct: 355 NGYITQSTRRLRAMLKNLDICYSMPLCKTKMDQTTVEDLAELSELENHNIGQIRRSRSVS 414

Query: 397 DIDNSPESLLVFSGNNNVHGLYDLLLNYRILWTSLSGVDVPVLCSPVPFQNSALSSPDIK 456
           +IDN+PES L F GN +VHGLYDLLLNYR  +  L   DVPVL SPVPFQN+ALSSP+IK
Sbjct: 415 NIDNTPESFLAFVGNESVHGLYDLLLNYRYSFEFLPTADVPVLSSPVPFQNAALSSPEIK 474

Query: 457 CMETRRAEHFAASCNKSIWKDGESAPRSPDGLCYSIEIKDALLPPWIICSICALMSSEGR 516
           C E  + EH +                     CY +EIK   +PPWII +ICA + + G+
Sbjct: 475 CSEMVKTEHTS---------------------CYMVEIKGEYIPPWIISNICANVGANGQ 513

Query: 517 SFEASFLTEPRSVGLNIALKPTSEKWEYKVAGSENSQDCSDTFG-IAEAVVTXXXXXXXX 575
           +FEASF+TEP SV LNI L    EK + +    E + + +D    I  +V+         
Sbjct: 514 NFEASFVTEPTSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHL 573

Query: 576 XXXXYCEGSYTGSLSP 591
               YC  SYT SLSP
Sbjct: 574 KNLKYCNKSYTVSLSP 589


>AT3G54750.1 | Symbols:  | unknown protein; Has 145 Blast hits to
           145 proteins in 60 species: Archae - 0; Bacteria - 0;
           Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other
           Eukaryotes - 6 (source: NCBI BLink). |
           chr3:20264833-20268416 REVERSE LENGTH=589
          Length = 589

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/616 (43%), Positives = 349/616 (56%), Gaps = 62/616 (10%)

Query: 8   RSMVKRKTPLELRGEQLKRASLKDLTNESTPPLASSTNATEGRRGFKKQGSFETPRYTDT 67
           + + KRKTP ELRGEQLKR +  D   E+   L    +A E   GFKK    + P+Y + 
Sbjct: 3   KVVAKRKTPSELRGEQLKRTAFVDQAKEAFDALRPCKSA-ERENGFKKSELSKNPKYIEM 61

Query: 68  QLDEVFAAKKSRFRVASGKENAKENPCLGKTSNLKNLLGFSTLDAKRQQGATCLTNSVAS 127
           ++DE++  KK+R  + SGKEN+KEN    ++S+L N+   S L A ++Q      N  AS
Sbjct: 62  RMDELYPVKKARPWMLSGKENSKENGA-KQSSSLINVSLLSNLAATKRQLIREENN--AS 118

Query: 128 SEVRKVGLLQACQTNENCSQGKFLSVAEISSVADRSSGLAASIDMGKALRGLAALEPRVD 187
           +EV      +A QTNE CSQ  F SV ++S+  +  S L   IDM KAL+GLA  EP + 
Sbjct: 119 TEVPDDTKAEARQTNERCSQSIFRSVTQLSTRGEELSCLP-DIDMNKALKGLATCEPLLV 177

Query: 188 NGLADDSSERRGDLKSTVKGSFFSECHVPGQKAPLDLTLKTNMRIVSSSSVNW---SAMR 244
           +   D + E   D  +++ GSF SE  V GQK PLDL+LKT  R+VSSS ++W   S M 
Sbjct: 178 HP-GDITGE---DDTASLSGSFMSEFQVSGQKIPLDLSLKTYARLVSSSPLSWLHRSIMG 233

Query: 245 GTMRGSNGFKDL---------------------------HSWMYXXXXXXXXXXXXXXXX 277
            T  G    K L                           HSW+Y                
Sbjct: 234 STYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWVYPQSTLPPFVISAMVAS 293

Query: 278 TVD-GELEFLRKRQVAWEESFRDLYYMLRNNICGLFYVCTSQFVVMFTGGDSSRRSKCSI 336
             D GE++FL+KR++AWE++FR LY+M R N+C +FYVCTSQFV MFTG   S  +K S 
Sbjct: 294 VSDRGEVDFLQKRKLAWEDAFRSLYFMFRKNLCKVFYVCTSQFVAMFTGSCESGGAKRSC 353

Query: 337 NAYISRSTMGLRSLLKEHDLCFYMPLCHSKVELVATESLAELLEIEKQNLGQTRRSRSFS 396
           N YI++ST  LR++LK  D+C+ MPLC +K++    E LAEL E+E  N+GQ RRSRS S
Sbjct: 354 NGYITQSTRRLRAMLKNLDICYSMPLCKTKMDQTTVEDLAELSELENHNIGQIRRSRSVS 413

Query: 397 DIDNSPESLLVFSGNNNVHGLYDLLLNYRILWTSLSGVDVPVLCSPVPFQNSALSSPDIK 456
           +IDN+PES L F GN +VHGLYDLLLNYR  +  L   DVPVL SPVPFQN+ALSSP+IK
Sbjct: 414 NIDNTPESFLAFVGNESVHGLYDLLLNYRYSFEFLPTADVPVLSSPVPFQNAALSSPEIK 473

Query: 457 CMETRRAEHFAASCNKSIWKDGESAPRSPDGLCYSIEIKDALLPPWIICSICALMSSEGR 516
           C E  + EH +                     CY +EIK   +PPWII +ICA + + G+
Sbjct: 474 CSEMVKTEHTS---------------------CYMVEIKGEYIPPWIISNICANVGANGQ 512

Query: 517 SFEASFLTEPRSVGLNIALKPTSEKWEYKVAGSENSQDCSDTFG-IAEAVVTXXXXXXXX 575
           +FEASF+TEP SV LNI L    EK + +    E + + +D    I  +V+         
Sbjct: 513 NFEASFVTEPTSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHL 572

Query: 576 XXXXYCEGSYTGSLSP 591
               YC  SYT SLSP
Sbjct: 573 KNLKYCNKSYTVSLSP 588


>AT3G54750.2 | Symbols:  | unknown protein; Has 145 Blast hits to
           145 proteins in 60 species: Archae - 0; Bacteria - 0;
           Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other
           Eukaryotes - 6 (source: NCBI BLink). |
           chr3:20264833-20268416 REVERSE LENGTH=589
          Length = 589

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/616 (43%), Positives = 349/616 (56%), Gaps = 62/616 (10%)

Query: 8   RSMVKRKTPLELRGEQLKRASLKDLTNESTPPLASSTNATEGRRGFKKQGSFETPRYTDT 67
           + + KRKTP ELRGEQLKR +  D   E+   L    +A E   GFKK    + P+Y + 
Sbjct: 3   KVVAKRKTPSELRGEQLKRTAFVDQAKEAFDALRPCKSA-ERENGFKKSELSKNPKYIEM 61

Query: 68  QLDEVFAAKKSRFRVASGKENAKENPCLGKTSNLKNLLGFSTLDAKRQQGATCLTNSVAS 127
           ++DE++  KK+R  + SGKEN+KEN    ++S+L N+   S L A ++Q      N  AS
Sbjct: 62  RMDELYPVKKARPWMLSGKENSKENGA-KQSSSLINVSLLSNLAATKRQLIREENN--AS 118

Query: 128 SEVRKVGLLQACQTNENCSQGKFLSVAEISSVADRSSGLAASIDMGKALRGLAALEPRVD 187
           +EV      +A QTNE CSQ  F SV ++S+  +  S L   IDM KAL+GLA  EP + 
Sbjct: 119 TEVPDDTKAEARQTNERCSQSIFRSVTQLSTRGEELSCLP-DIDMNKALKGLATCEPLLV 177

Query: 188 NGLADDSSERRGDLKSTVKGSFFSECHVPGQKAPLDLTLKTNMRIVSSSSVNW---SAMR 244
           +   D + E   D  +++ GSF SE  V GQK PLDL+LKT  R+VSSS ++W   S M 
Sbjct: 178 HP-GDITGE---DDTASLSGSFMSEFQVSGQKIPLDLSLKTYARLVSSSPLSWLHRSIMG 233

Query: 245 GTMRGSNGFKDL---------------------------HSWMYXXXXXXXXXXXXXXXX 277
            T  G    K L                           HSW+Y                
Sbjct: 234 STYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWVYPQSTLPPFVISAMVAS 293

Query: 278 TVD-GELEFLRKRQVAWEESFRDLYYMLRNNICGLFYVCTSQFVVMFTGGDSSRRSKCSI 336
             D GE++FL+KR++AWE++FR LY+M R N+C +FYVCTSQFV MFTG   S  +K S 
Sbjct: 294 VSDRGEVDFLQKRKLAWEDAFRSLYFMFRKNLCKVFYVCTSQFVAMFTGSCESGGAKRSC 353

Query: 337 NAYISRSTMGLRSLLKEHDLCFYMPLCHSKVELVATESLAELLEIEKQNLGQTRRSRSFS 396
           N YI++ST  LR++LK  D+C+ MPLC +K++    E LAEL E+E  N+GQ RRSRS S
Sbjct: 354 NGYITQSTRRLRAMLKNLDICYSMPLCKTKMDQTTVEDLAELSELENHNIGQIRRSRSVS 413

Query: 397 DIDNSPESLLVFSGNNNVHGLYDLLLNYRILWTSLSGVDVPVLCSPVPFQNSALSSPDIK 456
           +IDN+PES L F GN +VHGLYDLLLNYR  +  L   DVPVL SPVPFQN+ALSSP+IK
Sbjct: 414 NIDNTPESFLAFVGNESVHGLYDLLLNYRYSFEFLPTADVPVLSSPVPFQNAALSSPEIK 473

Query: 457 CMETRRAEHFAASCNKSIWKDGESAPRSPDGLCYSIEIKDALLPPWIICSICALMSSEGR 516
           C E  + EH +                     CY +EIK   +PPWII +ICA + + G+
Sbjct: 474 CSEMVKTEHTS---------------------CYMVEIKGEYIPPWIISNICANVGANGQ 512

Query: 517 SFEASFLTEPRSVGLNIALKPTSEKWEYKVAGSENSQDCSDTFG-IAEAVVTXXXXXXXX 575
           +FEASF+TEP SV LNI L    EK + +    E + + +D    I  +V+         
Sbjct: 513 NFEASFVTEPTSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHL 572

Query: 576 XXXXYCEGSYTGSLSP 591
               YC  SYT SLSP
Sbjct: 573 KNLKYCNKSYTVSLSP 588