Miyakogusa Predicted Gene

Lj6g3v0352750.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0352750.2 tr|Q9LMD3|Q9LMD3_ARATH F14D16.9 OS=Arabidopsis
thaliana GN=Clgn PE=4 SV=1,87.76,8e-18,FAMILY NOT NAMED,NULL; DDT,DDT
domain,CUFF.57728.2
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g34610.1                                                       467   e-132
Glyma05g01530.1                                                       456   e-128
Glyma17g10360.1                                                       447   e-126
Glyma06g20040.1                                                       430   e-121
Glyma04g07780.1                                                       201   6e-52

>Glyma04g34610.1 
          Length = 737

 Score =  467 bits (1201), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 212/239 (88%), Positives = 229/239 (95%)

Query: 1   MWEFASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDVHMPLLKAIPPITRMALS 60
           MWE AS+LNFL+LFRPLLNISVEFSAEEFETALLTPNDTL D+HMPLLKAIPPITRMALS
Sbjct: 119 MWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALS 178

Query: 61  RDTWITVLCRKLRDWWHWVAEGDIPVVASHGAEIDVYKSLDPGVRVIILKALCDIRVEQE 120
           RDTWITVLCRKLRDWWHWVA+GD+P+VASHGAE++VYKSLDPGVRVIILKALCDIRVEQE
Sbjct: 179 RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPGVRVIILKALCDIRVEQE 238

Query: 121 DIRSYIDNSVKHGVQLSTFRKERVGGDSHGVSFWYEDDPIIGHRLYREIRKTEVVQLKKG 180
           DIR YID S+KHG+ LSTFRKER+GGDSHG+S+WYEDD IIGHRLYREIRKTEVVQ+KKG
Sbjct: 239 DIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYWYEDDQIIGHRLYREIRKTEVVQMKKG 298

Query: 181 KPRGSQVLSNTTYQWETVATNFDEFQDVSEKLFSSKNRMEVSVGKKIKIDMLPEVEIVH 239
           KPRGSQV SNTTYQWETVATNFDEFQDVSEKLF+SKNR E SVGKK+KIDMLPE+E VH
Sbjct: 299 KPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEASVGKKVKIDMLPEIEKVH 357


>Glyma05g01530.1 
          Length = 715

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 207/235 (88%), Positives = 227/235 (96%)

Query: 1   MWEFASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDVHMPLLKAIPPITRMALS 60
           MWEFASVLNF+HLFRPLLNIS+EFSAEEFETALLTPN+TL  +HMPLLKAIPPITRMAL+
Sbjct: 107 MWEFASVLNFMHLFRPLLNISLEFSAEEFETALLTPNETLFHIHMPLLKAIPPITRMALT 166

Query: 61  RDTWITVLCRKLRDWWHWVAEGDIPVVASHGAEIDVYKSLDPGVRVIILKALCDIRVEQE 120
           RDTWITVLCRKLRDWWHWVA+GD+P+VASHG EI+ YKSLDPGVRV+ILKALCDIRVEQE
Sbjct: 167 RDTWITVLCRKLRDWWHWVADGDLPIVASHGVEIEEYKSLDPGVRVVILKALCDIRVEQE 226

Query: 121 DIRSYIDNSVKHGVQLSTFRKERVGGDSHGVSFWYEDDPIIGHRLYREIRKTEVVQLKKG 180
           DIRSYIDNS+KHGVQLSTFRKER+GGDSHG+S+WYEDDPIIGHRLYRE RKTEVVQ+KKG
Sbjct: 227 DIRSYIDNSIKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREKRKTEVVQMKKG 286

Query: 181 KPRGSQVLSNTTYQWETVATNFDEFQDVSEKLFSSKNRMEVSVGKKIKIDMLPEV 235
           KPRGSQVLSNT+YQWE VATNFDEF+DVSEKLFSSKNR E S+GKK+KIDMLPE+
Sbjct: 287 KPRGSQVLSNTSYQWEAVATNFDEFEDVSEKLFSSKNRTEASMGKKLKIDMLPEI 341


>Glyma17g10360.1 
          Length = 713

 Score =  447 bits (1150), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 203/235 (86%), Positives = 225/235 (95%)

Query: 1   MWEFASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDVHMPLLKAIPPITRMALS 60
           MWEFASVLNFLHLFRPLLNIS+EFSAEEFETALL PNDTL  +HMPLLKAIPPITRMAL+
Sbjct: 107 MWEFASVLNFLHLFRPLLNISLEFSAEEFETALLAPNDTLFHIHMPLLKAIPPITRMALT 166

Query: 61  RDTWITVLCRKLRDWWHWVAEGDIPVVASHGAEIDVYKSLDPGVRVIILKALCDIRVEQE 120
           RDTWITVLCRKLRDWWHWVA+GD+P+VASHGAEI++YK LDPGVRV+ILK LCDIRVEQE
Sbjct: 167 RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEIYKLLDPGVRVVILKVLCDIRVEQE 226

Query: 121 DIRSYIDNSVKHGVQLSTFRKERVGGDSHGVSFWYEDDPIIGHRLYREIRKTEVVQLKKG 180
           DIRSYIDNS+KHGVQLSTFRKER+GGDS+G+S+WYEDDPIIGHR+YREIRKTEVVQ+KKG
Sbjct: 227 DIRSYIDNSMKHGVQLSTFRKERIGGDSNGISYWYEDDPIIGHRMYREIRKTEVVQMKKG 286

Query: 181 KPRGSQVLSNTTYQWETVATNFDEFQDVSEKLFSSKNRMEVSVGKKIKIDMLPEV 235
           KPRGS VLSNT+Y WE +ATNFDEF+DVSEKLFSSKNR E SVGK++KIDMLPE+
Sbjct: 287 KPRGSLVLSNTSYLWEVIATNFDEFEDVSEKLFSSKNRTETSVGKRLKIDMLPEI 341


>Glyma06g20040.1 
          Length = 608

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 199/239 (83%), Positives = 218/239 (91%), Gaps = 10/239 (4%)

Query: 1   MWEFASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDVHMPLLKAIPPITRMALS 60
           MWE AS+LNFL+LFRPLLNISVEFSAEEFETALLTPNDTL D+H+PLLKAIPPITRMALS
Sbjct: 1   MWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHVPLLKAIPPITRMALS 60

Query: 61  RDTWITVLCRKLRDWWHWVAEGDIPVVASHGAEIDVYKSLDPGVRVIILKALCDIRVEQE 120
           RDTWITVLCRKLRDWW WVA+GD+P+VASHG E++VYKSLDPGVRV+ILKALCDIRVEQE
Sbjct: 61  RDTWITVLCRKLRDWWQWVADGDLPIVASHGMEVEVYKSLDPGVRVVILKALCDIRVEQE 120

Query: 121 DIRSYIDNSVKHGVQLSTFRKERVGGDSHGVSFWYEDDPIIGHRLYREIRKTEVVQLKKG 180
           DIR YID S+KHG+ LSTFRKER+GGDSHG+S+W          LYREIRKTEVVQ+KKG
Sbjct: 121 DIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYW----------LYREIRKTEVVQMKKG 170

Query: 181 KPRGSQVLSNTTYQWETVATNFDEFQDVSEKLFSSKNRMEVSVGKKIKIDMLPEVEIVH 239
           KPRGSQV SNTTYQWETVATNFDEFQDVSEKLF+SKNR E SVGKK+KIDMLPE+E VH
Sbjct: 171 KPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEASVGKKVKIDMLPEIEKVH 229


>Glyma04g07780.1 
          Length = 403

 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 156/236 (66%), Gaps = 5/236 (2%)

Query: 2   WEFASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDVHMPLLKAIPPITRMALSR 61
           WE ASVLNFL +F P+L   +  SAE+ E  L+ P+ +L+ +H+ LLK IPP+++     
Sbjct: 33  WELASVLNFLDVFGPILGKDLNLSAEDIEIGLVKPDASLARLHIQLLKGIPPVSKTLEDS 92

Query: 62  DTWITVLCRKLRDWWHWVAEGDIPVVASHGAEIDVYKSLDPGVRVIILKALCDIRVEQED 121
           D W+T LC+ L  WW WVA+G+IP+V S G EI  YK LDP  R+++LKALC++R +Q D
Sbjct: 93  DKWVTALCKNLTTWWPWVAKGEIPLVPSKGVEISKYKELDPLDRLLLLKALCEVRAQQHD 152

Query: 122 IRSYIDNSVKHGVQLSTFRKERVGGDSHGVSFWYE-DDPIIGHRLYREIRKTEVVQLKKG 180
             SYI++++K G Q+STFRK+ VG D  G S+WY+       HRLYREI  ++ +   K 
Sbjct: 153 AVSYINDALKEGTQISTFRKDAVGRDGTGTSYWYDATSKGQSHRLYREIITSDSIPNDKD 212

Query: 181 KPRGSQVLSNTTYQWETVATNFDEFQDVSEKLFSSKNRMEVSVGKKIKIDMLPEVE 236
           +    + LS  T QWET+A+N ++F  V+EK   SK+ +EV+V  K++ D +P +E
Sbjct: 213 E----ECLSLPTIQWETLASNLEDFSKVAEKFAISKSAVEVAVSMKLQDDAIPALE 264