Miyakogusa Predicted Gene

Lj6g3v0326360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0326360.1 Non Chatacterized Hit- tr|A5AZN9|A5AZN9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.13,3e-16,seg,NULL,CUFF.57747.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23460.1 | Symbols: XLG1, ATXLG1 | extra-large G-protein 1 | ...    51   8e-07
AT1G31930.3 | Symbols: XLG3 | extra-large GTP-binding protein 3 ...    49   4e-06
AT1G31930.2 | Symbols: XLG3 | extra-large GTP-binding protein 3 ...    49   4e-06
AT1G31930.1 | Symbols: XLG3 | extra-large GTP-binding protein 3 ...    49   4e-06
AT4G34390.1 | Symbols: XLG2 | extra-large GTP-binding protein 2 ...    48   6e-06

>AT2G23460.1 | Symbols: XLG1, ATXLG1 | extra-large G-protein 1 |
           chr2:9995699-9998945 FORWARD LENGTH=888
          Length = 888

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 166 CLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWCCSWRYPITLKQVE 225
           CLVC   YC  CV R MG M EGRKC+ C+G    +    + G +  CS      L  +E
Sbjct: 240 CLVCDAKYCNSCVLRAMGSMPEGRKCVTCIGFPIDE---SKRGSLGKCSRMLKRLLNDLE 296

Query: 226 LKWAEKGPR 234
           +K   K  R
Sbjct: 297 VKQIMKTER 305


>AT1G31930.3 | Symbols: XLG3 | extra-large GTP-binding protein 3 |
           chr1:11465832-11468961 FORWARD LENGTH=848
          Length = 848

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 152 CSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIG 220


>AT1G31930.2 | Symbols: XLG3 | extra-large GTP-binding protein 3 |
           chr1:11465832-11468961 FORWARD LENGTH=848
          Length = 848

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 152 CSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIG 220


>AT1G31930.1 | Symbols: XLG3 | extra-large GTP-binding protein 3 |
           chr1:11465832-11468961 FORWARD LENGTH=848
          Length = 848

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 152 CSICCSYVYFFRTRCLVCGRVYCKQCVERGMGEMTEGRKCIECLG 196
           C  C    +  +  C+VC   YC  CV R MG M EGRKC+ C+G
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIG 220


>AT4G34390.1 | Symbols: XLG2 | extra-large GTP-binding protein 2 |
           chr4:16441579-16444840 FORWARD LENGTH=861
          Length = 861

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 166 CLVCGRVYCKQCVERGMGEMTEGRKCIECLGLRFSQRYIERAGIVWC 212
           C+VC   YC  CV R MG M EGRKC  C+G R  +   +RA +  C
Sbjct: 229 CIVCDAKYCFNCVRRAMGAMPEGRKCQACIGYRIDES--KRASLGKC 273