Miyakogusa Predicted Gene

Lj6g3v0156170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0156170.1 tr|Q53D73|Q53D73_LOTJA Superoxide dismutase
OS=Lotus japonicus GN=sodB PE=2 SV=1,99.56,0,seg,NULL; Fe,Mn
superoxide dismutase (SOD), N-terminal domain,Manganese/iron
superoxide dismutase, N,CUFF.57556.1
         (230 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g048990.1 | superoxide dismutase | HC | chr1:18924069-1892...   333   1e-91
Medtr1g048990.2 | superoxide dismutase | HC | chr1:18924069-1892...   331   3e-91
Medtr3g078860.1 | superoxide dismutase | HC | chr3:35607946-3560...   155   2e-38
Medtr3g094250.1 | superoxide dismutase | HC | chr3:43080786-4307...    62   4e-10

>Medtr1g048990.1 | superoxide dismutase | HC |
           chr1:18924069-18927272 | 20130731
          Length = 311

 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 7/231 (3%)

Query: 1   MKLLSPSTSTTCYLSSSPSAFLPRHSHGFQNLGS--AGTFKFSKKQRRCVRKAGPTEISA 58
           MKLLSPS ++T ++SSS   FLP   +GFQN GS  A TFKFSK Q RC+     T+I+A
Sbjct: 1   MKLLSPSATSTTHISSS--FFLP---NGFQNHGSSSATTFKFSKNQGRCIGNDEGTQITA 55

Query: 59  KFELKPPPYPMNALEPIMSQETFNYHWGKHHRAYVDNLNKQIEGTDLDGKSLEELIVIAY 118
           KFELKPPPYP+NALEPIMSQ TF YHWGKHHRAYVDNLNKQIEGTDLDGKSLEE I+++Y
Sbjct: 56  KFELKPPPYPLNALEPIMSQNTFEYHWGKHHRAYVDNLNKQIEGTDLDGKSLEETIIMSY 115

Query: 119 NKGDMLPSFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFEKFVDEFKTAAA 178
           N GD+LP+FNNAAQ WNH+FFW                  IERDFGSFEKFV++FK AA+
Sbjct: 116 NNGDILPAFNNAAQVWNHDFFWESMKPGGGGKPSGELLKLIERDFGSFEKFVEQFKLAAS 175

Query: 179 TQFGSGWAWLAYKENRLDVGNAINPLASDEDKKLVVVKTPNAVNPLVWGYY 229
           TQFGSGWAWLAYKENRLDVGNA+NPLA++EDKKLVV+K+PNAVNPLVW ++
Sbjct: 176 TQFGSGWAWLAYKENRLDVGNAVNPLATEEDKKLVVLKSPNAVNPLVWNHH 226


>Medtr1g048990.2 | superoxide dismutase | HC |
           chr1:18924069-18927272 | 20130731
          Length = 238

 Score =  331 bits (849), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 7/231 (3%)

Query: 1   MKLLSPSTSTTCYLSSSPSAFLPRHSHGFQNLGS--AGTFKFSKKQRRCVRKAGPTEISA 58
           MKLLSPS ++T ++SSS   FLP   +GFQN GS  A TFKFSK Q RC+     T+I+A
Sbjct: 1   MKLLSPSATSTTHISSS--FFLP---NGFQNHGSSSATTFKFSKNQGRCIGNDEGTQITA 55

Query: 59  KFELKPPPYPMNALEPIMSQETFNYHWGKHHRAYVDNLNKQIEGTDLDGKSLEELIVIAY 118
           KFELKPPPYP+NALEPIMSQ TF YHWGKHHRAYVDNLNKQIEGTDLDGKSLEE I+++Y
Sbjct: 56  KFELKPPPYPLNALEPIMSQNTFEYHWGKHHRAYVDNLNKQIEGTDLDGKSLEETIIMSY 115

Query: 119 NKGDMLPSFNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFEKFVDEFKTAAA 178
           N GD+LP+FNNAAQ WNH+FFW                  IERDFGSFEKFV++FK AA+
Sbjct: 116 NNGDILPAFNNAAQVWNHDFFWESMKPGGGGKPSGELLKLIERDFGSFEKFVEQFKLAAS 175

Query: 179 TQFGSGWAWLAYKENRLDVGNAINPLASDEDKKLVVVKTPNAVNPLVWGYY 229
           TQFGSGWAWLAYKENRLDVGNA+NPLA++EDKKLVV+K+PNAVNPLVW ++
Sbjct: 176 TQFGSGWAWLAYKENRLDVGNAVNPLATEEDKKLVVLKSPNAVNPLVWNHH 226


>Medtr3g078860.1 | superoxide dismutase | HC |
           chr3:35607946-35603989 | 20130731
          Length = 262

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 123/221 (55%), Gaps = 25/221 (11%)

Query: 11  TCYLSSSPSA---FLPRHSHGFQNLGSAGTFKFSKKQRRCVRKAGPTEISAKFELKPPPY 67
           +CYL+  P++   F P  S  F+        K   +++R       ++++A + LK PPY
Sbjct: 3   SCYLNPIPTSSRLFSPDLSTKFK------IPKLLHRKKRFGVLPRSSKVTAFYGLKTPPY 56

Query: 68  PMNALEPIMSQETFNYHWGKHHRAYVDNLNKQIEGTD-LDGKSLEELIVIAYNKGDMLPS 126
             +ALEP MS++T + HWG+HHR +++ LNKQ+   D L G +L+EL+ + YN G+  P 
Sbjct: 57  EHDALEPYMSKQTIDVHWGEHHRNFIEGLNKQLGKDDILYGYTLDELVKVTYNNGNPSPE 116

Query: 127 FNNAAQAWNHEFFWXXXXXXXXXXXXXXXXXXIERDFGSFEKFVDEFKTAAATQFGSGWA 186
           FNNAA+ WNH+FFW                  IE+DFGSF  F ++F  AA T FGSGW 
Sbjct: 117 FNNAAEVWNHDFFWESMQPGGGDIPILGLLQQIEKDFGSFTNFKEKFTEAALTLFGSGWV 176

Query: 187 WLAYKENRLDVGNAINPLASDEDKKLVVVKTPNAVNPLVWG 227
           WL  K                E+K+L +VKT N++ P+VWG
Sbjct: 177 WLVLKR---------------EEKQLAIVKTSNSICPIVWG 202


>Medtr3g094250.1 | superoxide dismutase | HC |
           chr3:43080786-43075424 | 20130731
          Length = 235

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 70/198 (35%), Gaps = 32/198 (16%)

Query: 40  FSKKQRRCVRKAGPTEISAK---------FELKPPPYPMNALEPIMSQETFNYHWGKHHR 90
            SKK    V +  P  I A          F L    Y   ALEP++S E    H  KHH+
Sbjct: 7   LSKKTLTTVLRNDPKPIGAAITQSRGLHVFTLPDLAYDYGALEPVISGEIMQIHHQKHHQ 66

Query: 91  AYVDNLNKQIEGTDLDGKSLEELIVIAYNKGDMLPSFNNAAQAWNHEFFWXXXXXXXXXX 150
            Y+ N NK +E         + L  +          FN      NH  FW          
Sbjct: 67  TYITNYNKALEQLHDSVAKADSLTTVKLQNA---IKFNGGGHI-NHSIFWKNLAPVREGG 122

Query: 151 X---XXXXXXXIERDFGSFEKFVDEFKTAAATQFGSGWAWLAYKENRLDVGNAINPLASD 207
                      I+ +FGS E  + +     A   GSGW WLA                 D
Sbjct: 123 GEPPKEALGWAIDTNFGSLEALIQKVNAEGAALQGSGWVWLAL----------------D 166

Query: 208 EDKKLVVVKTPNAVNPLV 225
           ++ K +VV+T    +PLV
Sbjct: 167 KELKRLVVETTANQDPLV 184