Miyakogusa Predicted Gene
- Lj6g3v0024570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0024570.1 Non Characterized Hit- tr|K4CW68|K4CW68_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.18,0.000000000002,RRM,RNA recognition motif domain;
RNA-binding domain, RBD,NULL; RRM_6,NULL; RRM_1,RNA recognition
mo,CUFF.57375.1
(801 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g041735.2 | RNA recognition motif, a.k.a. RRM, RBD protein... 893 0.0
Medtr1g041735.4 | RNA recognition motif, a.k.a. RRM, RBD protein... 791 0.0
Medtr1g041735.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 790 0.0
Medtr1g041735.3 | RNA recognition motif, a.k.a. RRM, RBD protein... 521 e-148
Medtr4g031680.1 | U2 snRNP auxilliary factor, large subunit, spl... 130 6e-30
Medtr3g005670.1 | U2 snRNP auxilliary factor, large subunit, spl... 129 1e-29
Medtr3g005670.5 | U2 snRNP auxilliary factor, large subunit, spl... 129 1e-29
Medtr3g005670.4 | U2 snRNP auxilliary factor, large subunit, spl... 129 1e-29
Medtr3g005670.2 | U2 snRNP auxilliary factor, large subunit, spl... 129 1e-29
Medtr2g013130.2 | U2 snRNP auxilliary factor, large subunit, spl... 127 5e-29
Medtr3g005670.7 | U2 snRNP auxilliary factor, large subunit, spl... 127 6e-29
Medtr3g005670.6 | U2 snRNP auxilliary factor, large subunit, spl... 126 7e-29
Medtr3g005670.3 | U2 snRNP auxilliary factor, large subunit, spl... 125 1e-28
Medtr2g013130.1 | U2 snRNP auxilliary factor, large subunit, spl... 122 1e-27
Medtr2g013130.4 | U2 snRNP auxilliary factor, large subunit, spl... 119 1e-26
Medtr2g013130.3 | U2 snRNP auxilliary factor, large subunit, spl... 118 2e-26
>Medtr1g041735.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr1:15687990-15676413 | 20130731
Length = 951
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/806 (62%), Positives = 584/806 (72%), Gaps = 44/806 (5%)
Query: 11 KIXKRLSNDTEEVPEXXXXXXXXXXXXVEGRAKYEREIKRKYRNGDDETQQRNDKHVEGR 70
KI + +SND EEVPE EGR KY REI + E R
Sbjct: 175 KIKRLMSNDFEEVPEKKHHRDSDKHIHAEGREKYGREINK-----------------EPR 217
Query: 71 ARYEREIKRKFRNGDDETQERSAKRKQDIAKHHNPHIYEKKDRGEKVKSHYEESTAKXXX 130
A+YEREIKRK+RN DDETQ+R+A RKQDIAKHHNPHIYE+K+R EKVK HYEE T K
Sbjct: 218 AKYEREIKRKYRN-DDETQDRNAMRKQDIAKHHNPHIYERKNRQEKVKPHYEEPTMKRRR 276
Query: 131 XXXXXXXXXXXXXXXXPKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNGSSG 190
P+ HR TY DGE K +S SL D SRKKHSD + RVSTN SS
Sbjct: 277 SRSREREDRRRSPSFSPRAHRKTYQDGERKNLSMLSLSDSSRKKHSD-DKTRVSTNDSSS 335
Query: 191 LHHRHDXXXXXXXXXXXXXPRKRKSEAAVRTPSPSKHSIEKKRAGWDLPPLQTNNPSPAF 250
HHR PRKRKSE +TPSPSKHS EKKR GWDLPP+ T+ P+ A
Sbjct: 336 -HHRRYRHSSPASGLGGYSPRKRKSEIDKKTPSPSKHSPEKKRPGWDLPPVGTD-PTLAP 393
Query: 251 VSS-------VVLSNVHDVASASSLNLSNVK-LPMSFLNDISTGKKANIDSVQLTQATRP 302
VSS VLS++HD+A+A+SLN S VK LP+SF N +STGK ANIDSVQLTQATRP
Sbjct: 394 VSSGFELSNHSVLSSMHDLAAATSLNPSIVKPLPVSFFNAVSTGKNANIDSVQLTQATRP 453
Query: 303 MRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVEFLTAE 362
MRR+YLENLPASASEK VMD FNN+LLS GV+HIQQ +PCISC +HKDRGQA+VEFLTAE
Sbjct: 454 MRRVYLENLPASASEKVVMDCFNNLLLSSGVNHIQQTRPCISCIVHKDRGQALVEFLTAE 513
Query: 363 DASAALSFDGSVLCGSVVKIRRPKDYVDVATVEPEGSVEDSVRISDVVIDSPNKIFIGGL 422
DASAALSFDGS L GS VKI+RPKDYV+ AT EPE SVE + ISDVV+DSP KIFIGG+
Sbjct: 514 DASAALSFDGSKLFGSTVKIKRPKDYVEFATDEPERSVEVAATISDVVVDSPYKIFIGGI 573
Query: 423 SKHLSSDMLVEIAGAFGSLKAYHFETEGSNRSCAFLEYVDQSVTIKACAGLNGMKLGGEV 482
S H+SS+ML+EIAG FG LKAYHFE SN SCAF+EYVD SVTIKACAGLNGM LGGEV
Sbjct: 574 SNHISSEMLMEIAGVFGFLKAYHFEARVSNGSCAFVEYVDHSVTIKACAGLNGMNLGGEV 633
Query: 483 LTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTEVLEIKNVFAVESILSLSDMAIED 542
LTVVQAMPDAS +EN KPPSYG+PEHA+PLLR+PT+VLEIKNVF VES+ SLSD IE+
Sbjct: 634 LTVVQAMPDASPVENDSKPPSYGIPEHAEPLLREPTQVLEIKNVFTVESLSSLSDTVIEE 693
Query: 543 ILEDVRLECARFGTIKSINVVKYRSDEHLATKSEECEVTNEVDSKEASQDAMCV--NAES 600
ILEDVRLECARFGT+KSI+V ++ D +LATKSE EV +V S+E + D V +AES
Sbjct: 694 ILEDVRLECARFGTVKSIHVARHCKDNNLATKSE--EVIKKVGSEEPTPDTHTVTNDAES 751
Query: 601 SFPEKAACAISNEASGVEFYYGKELGEDQVNDRSSSINVDKNADDIFDNASCQKEQLVSD 660
SF E+A + S G+E + K L ED+ ND +S+NVDKNA ++FDN +CQ E LVSD
Sbjct: 752 SFSEEATYSNSKGTGGMESHGDKVLEEDKDND-GTSVNVDKNA-EVFDNTTCQ-EHLVSD 808
Query: 661 KTVENAGHESIQSSIIQECPDHLDTPNDVPELHE-MVANDIDVDIENKMEGGNMNLKNTV 719
TV +AG+E + SS IQ CPD +TPND PELH+ M+ANDIDV+ K GN + +N V
Sbjct: 809 STVIDAGNEDLPSSTIQGCPDQGNTPNDDPELHDSMIANDIDVE---KTVIGNTDSENMV 865
Query: 720 CPLQEVSSERHNSSELVGSRKGI----DKEDDICGHVFEPGSVLVEYGRAEACRLAAHCL 775
PLQE SE S ELVG+RK I ++EDD HVFE GSVLVEY R+EACR AAHC+
Sbjct: 866 YPLQEGFSECDASLELVGNRKDIKEEDEEEDDTYNHVFEEGSVLVEYARSEACRSAAHCM 925
Query: 776 HGRLFDGRMVTVEYIAQSLYRARFTK 801
H RLFDGR+V+V+Y+A SLYR RFTK
Sbjct: 926 HRRLFDGRLVSVQYVALSLYRERFTK 951
>Medtr1g041735.4 | RNA recognition motif, a.k.a. RRM, RBD protein | HC
| chr1:15688028-15676480 | 20130731
Length = 1071
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/670 (65%), Positives = 510/670 (76%), Gaps = 26/670 (3%)
Query: 147 PKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNGSSGLHHRHDXXXXXXXXXX 206
P+ HR TY DGE K +S SL D SRKKHSD + RVSTN SS HHR
Sbjct: 413 PRAHRKTYQDGERKNLSMLSLSDSSRKKHSD-DKTRVSTNDSSS-HHRRYRHSSPASGLG 470
Query: 207 XXXPRKRKSEAAVRTPSPSKHSIEKKRAGWDLPPLQTNNPSPAFVSS-------VVLSNV 259
PRKRKSE +TPSPSKHS EKKR GWDLPP+ T+ P+ A VSS VLS++
Sbjct: 471 GYSPRKRKSEIDKKTPSPSKHSPEKKRPGWDLPPVGTD-PTLAPVSSGFELSNHSVLSSM 529
Query: 260 HDVASASSLNLSNVK-LPMSFLNDISTGKKANIDSVQLTQATRPMRRLYLENLPASASEK 318
HD+A+A+SLN S VK LP+SF N +STGK ANIDSVQLTQATRPMRR+YLENLPASASEK
Sbjct: 530 HDLAAATSLNPSIVKPLPVSFFNAVSTGKNANIDSVQLTQATRPMRRVYLENLPASASEK 589
Query: 319 AVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVEFLTAEDASAALSFDGSVLCGS 378
VMD FNN+LLS GV+HIQQ +PCISC +HKDRGQA+VEFLTAEDASAALSFDGS L GS
Sbjct: 590 VVMDCFNNLLLSSGVNHIQQTRPCISCIVHKDRGQALVEFLTAEDASAALSFDGSKLFGS 649
Query: 379 VVKIRRPKDYVDVATVEPEGSVEDSVRISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAF 438
VKI+RPKDYV+ AT EPE SVE + ISDVV+DSP KIFIGG+S H+SS+ML+EIAG F
Sbjct: 650 TVKIKRPKDYVEFATDEPERSVEVAATISDVVVDSPYKIFIGGISNHISSEMLMEIAGVF 709
Query: 439 GSLKAYHFETEGSNRSCAFLEYVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENG 498
G LKAYHFE SN SCAF+EYVD SVTIKACAGLNGM LGGEVLTVVQAMPDAS +EN
Sbjct: 710 GFLKAYHFEARVSNGSCAFVEYVDHSVTIKACAGLNGMNLGGEVLTVVQAMPDASPVEND 769
Query: 499 DKPPSYGVPEHAKPLLRKPTEVLEIKNVFAVESILSLSDMAIEDILEDVRLECARFGTIK 558
KPPSYG+PEHA+PLLR+PT+VLEIKNVF VES+ SLSD IE+ILEDVRLECARFGT+K
Sbjct: 770 SKPPSYGIPEHAEPLLREPTQVLEIKNVFTVESLSSLSDTVIEEILEDVRLECARFGTVK 829
Query: 559 SINVVKYRSDEHLATKSEECEVTNEVDSKEASQDAMCV--NAESSFPEKAACAISNEASG 616
SI+V ++ D +LATKSE EV +V S+E + D V +AESSF E+A + S G
Sbjct: 830 SIHVARHCKDNNLATKSE--EVIKKVGSEEPTPDTHTVTNDAESSFSEEATYSNSKGTGG 887
Query: 617 VEFYYGKELGEDQVNDRSSSINVDKNADDIFDNASCQKEQLVSDKTVENAGHESIQSSII 676
+E + K L ED+ ND +S+NVDKNA ++FDN +CQ E LVSD TV +AG+E + SS I
Sbjct: 888 MESHGDKVLEEDKDND-GTSVNVDKNA-EVFDNTTCQ-EHLVSDSTVIDAGNEDLPSSTI 944
Query: 677 QECPDHLDTPNDVPELHE-MVANDIDVDIENKMEGGNMNLKNTVCPLQEVSSERHNSSEL 735
Q CPD +TPND PELH+ M+ANDIDV+ K GN + +N V PLQE SE S EL
Sbjct: 945 QGCPDQGNTPNDDPELHDSMIANDIDVE---KTVIGNTDSENMVYPLQEGFSECDASLEL 1001
Query: 736 VGSRKGI----DKEDDICGHVFEPGSVLVEYGRAEACRLAAHCLHGRLFDGRMVTVEYIA 791
VG+RK I ++EDD HVFE GSVLVEY R+EACR AAHC+H RLFDGR+V+V+Y+A
Sbjct: 1002 VGNRKDIKEEDEEEDDTYNHVFEEGSVLVEYARSEACRSAAHCMHRRLFDGRLVSVQYVA 1061
Query: 792 QSLYRARFTK 801
SLYR RFTK
Sbjct: 1062 LSLYRERFTK 1071
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 107/177 (60%), Gaps = 19/177 (10%)
Query: 11 KIXKRLSNDTEEVPEXXXXXXXXXXXXVEGRAKYEREIKRKYRNGDDETQQRNDKHVEGR 70
KI + +SND EEVPE EGR KY REI + E R
Sbjct: 175 KIKRLMSNDFEEVPEKKHHRDSDKHIHAEGREKYGREINK-----------------EPR 217
Query: 71 ARYEREIKRKFRNGDDETQERSAKRKQDIAKHHNPHIYEKKDRGEKVKSHYEESTAKXXX 130
A+YEREIKRK+RN DDETQ+R+A RKQDIAKHHNPHIYE+K+R EKVK HYEE T K
Sbjct: 218 AKYEREIKRKYRN-DDETQDRNAMRKQDIAKHHNPHIYERKNRQEKVKPHYEEPTMKRRR 276
Query: 131 XXXXXXXXXXXXXXXXPKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNG 187
P+ HRNTY DGE K++S PSL D SRKKHSD +NRVSTNG
Sbjct: 277 SRSREREDRRKPRSLSPRAHRNTYQDGERKDLSVPSLTDSSRKKHSD-DKNRVSTNG 332
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 147 PKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNG 187
P+ HR Y DGE K++S SL D SRKKHSD +NR+STNG
Sbjct: 353 PRAHRKAYQDGERKDLSMLSLTDSSRKKHSD-DKNRLSTNG 392
>Medtr1g041735.1 | RNA recognition motif, a.k.a. RRM, RBD protein | HC
| chr1:15687988-15676358 | 20130731
Length = 1109
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/670 (65%), Positives = 510/670 (76%), Gaps = 26/670 (3%)
Query: 147 PKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNGSSGLHHRHDXXXXXXXXXX 206
P+ HR TY DGE K +S SL D SRKKHSD + RVSTN SS HHR
Sbjct: 451 PRAHRKTYQDGERKNLSMLSLSDSSRKKHSD-DKTRVSTNDSSS-HHRRYRHSSPASGLG 508
Query: 207 XXXPRKRKSEAAVRTPSPSKHSIEKKRAGWDLPPLQTNNPSPAFVSS-------VVLSNV 259
PRKRKSE +TPSPSKHS EKKR GWDLPP+ T+ P+ A VSS VLS++
Sbjct: 509 GYSPRKRKSEIDKKTPSPSKHSPEKKRPGWDLPPVGTD-PTLAPVSSGFELSNHSVLSSM 567
Query: 260 HDVASASSLNLSNVK-LPMSFLNDISTGKKANIDSVQLTQATRPMRRLYLENLPASASEK 318
HD+A+A+SLN S VK LP+SF N +STGK ANIDSVQLTQATRPMRR+YLENLPASASEK
Sbjct: 568 HDLAAATSLNPSIVKPLPVSFFNAVSTGKNANIDSVQLTQATRPMRRVYLENLPASASEK 627
Query: 319 AVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVEFLTAEDASAALSFDGSVLCGS 378
VMD FNN+LLS GV+HIQQ +PCISC +HKDRGQA+VEFLTAEDASAALSFDGS L GS
Sbjct: 628 VVMDCFNNLLLSSGVNHIQQTRPCISCIVHKDRGQALVEFLTAEDASAALSFDGSKLFGS 687
Query: 379 VVKIRRPKDYVDVATVEPEGSVEDSVRISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAF 438
VKI+RPKDYV+ AT EPE SVE + ISDVV+DSP KIFIGG+S H+SS+ML+EIAG F
Sbjct: 688 TVKIKRPKDYVEFATDEPERSVEVAATISDVVVDSPYKIFIGGISNHISSEMLMEIAGVF 747
Query: 439 GSLKAYHFETEGSNRSCAFLEYVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENG 498
G LKAYHFE SN SCAF+EYVD SVTIKACAGLNGM LGGEVLTVVQAMPDAS +EN
Sbjct: 748 GFLKAYHFEARVSNGSCAFVEYVDHSVTIKACAGLNGMNLGGEVLTVVQAMPDASPVEND 807
Query: 499 DKPPSYGVPEHAKPLLRKPTEVLEIKNVFAVESILSLSDMAIEDILEDVRLECARFGTIK 558
KPPSYG+PEHA+PLLR+PT+VLEIKNVF VES+ SLSD IE+ILEDVRLECARFGT+K
Sbjct: 808 SKPPSYGIPEHAEPLLREPTQVLEIKNVFTVESLSSLSDTVIEEILEDVRLECARFGTVK 867
Query: 559 SINVVKYRSDEHLATKSEECEVTNEVDSKEASQDAMCV--NAESSFPEKAACAISNEASG 616
SI+V ++ D +LATKSE EV +V S+E + D V +AESSF E+A + S G
Sbjct: 868 SIHVARHCKDNNLATKSE--EVIKKVGSEEPTPDTHTVTNDAESSFSEEATYSNSKGTGG 925
Query: 617 VEFYYGKELGEDQVNDRSSSINVDKNADDIFDNASCQKEQLVSDKTVENAGHESIQSSII 676
+E + K L ED+ ND +S+NVDKNA ++FDN +CQ E LVSD TV +AG+E + SS I
Sbjct: 926 MESHGDKVLEEDKDND-GTSVNVDKNA-EVFDNTTCQ-EHLVSDSTVIDAGNEDLPSSTI 982
Query: 677 QECPDHLDTPNDVPELHE-MVANDIDVDIENKMEGGNMNLKNTVCPLQEVSSERHNSSEL 735
Q CPD +TPND PELH+ M+ANDIDV+ K GN + +N V PLQE SE S EL
Sbjct: 983 QGCPDQGNTPNDDPELHDSMIANDIDVE---KTVIGNTDSENMVYPLQEGFSECDASLEL 1039
Query: 736 VGSRKGI----DKEDDICGHVFEPGSVLVEYGRAEACRLAAHCLHGRLFDGRMVTVEYIA 791
VG+RK I ++EDD HVFE GSVLVEY R+EACR AAHC+H RLFDGR+V+V+Y+A
Sbjct: 1040 VGNRKDIKEEDEEEDDTYNHVFEEGSVLVEYARSEACRSAAHCMHRRLFDGRLVSVQYVA 1099
Query: 792 QSLYRARFTK 801
SLYR RFTK
Sbjct: 1100 LSLYRERFTK 1109
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 107/177 (60%), Gaps = 19/177 (10%)
Query: 11 KIXKRLSNDTEEVPEXXXXXXXXXXXXVEGRAKYEREIKRKYRNGDDETQQRNDKHVEGR 70
KI + +SND EEVPE EGR KY REI + E R
Sbjct: 213 KIKRLMSNDFEEVPEKKHHRDSDKHIHAEGREKYGREINK-----------------EPR 255
Query: 71 ARYEREIKRKFRNGDDETQERSAKRKQDIAKHHNPHIYEKKDRGEKVKSHYEESTAKXXX 130
A+YEREIKRK+RN DDETQ+R+A RKQDIAKHHNPHIYE+K+R EKVK HYEE T K
Sbjct: 256 AKYEREIKRKYRN-DDETQDRNAMRKQDIAKHHNPHIYERKNRQEKVKPHYEEPTMKRRR 314
Query: 131 XXXXXXXXXXXXXXXXPKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNG 187
P+ HRNTY DGE K++S PSL D SRKKHSD +NRVSTNG
Sbjct: 315 SRSREREDRRKPRSLSPRAHRNTYQDGERKDLSVPSLTDSSRKKHSD-DKNRVSTNG 370
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 147 PKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNG 187
P+ HR Y DGE K++S SL D SRKKHSD +NR+STNG
Sbjct: 391 PRAHRKAYQDGERKDLSMLSLTDSSRKKHSD-DKNRLSTNG 430
>Medtr1g041735.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr1:15687988-15678303 | 20130731
Length = 836
Score = 521 bits (1343), Expect = e-148, Method: Compositional matrix adjust.
Identities = 274/388 (70%), Positives = 308/388 (79%), Gaps = 11/388 (2%)
Query: 147 PKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNGSSGLHHRHDXXXXXXXXXX 206
P+ HR TY DGE K +S SL D SRKKHSD + RVSTN SS HHR
Sbjct: 451 PRAHRKTYQDGERKNLSMLSLSDSSRKKHSD-DKTRVSTNDSSS-HHRRYRHSSPASGLG 508
Query: 207 XXXPRKRKSEAAVRTPSPSKHSIEKKRAGWDLPPLQTNNPSPAFVSS-------VVLSNV 259
PRKRKSE +TPSPSKHS EKKR GWDLPP+ T+ P+ A VSS VLS++
Sbjct: 509 GYSPRKRKSEIDKKTPSPSKHSPEKKRPGWDLPPVGTD-PTLAPVSSGFELSNHSVLSSM 567
Query: 260 HDVASASSLNLSNVK-LPMSFLNDISTGKKANIDSVQLTQATRPMRRLYLENLPASASEK 318
HD+A+A+SLN S VK LP+SF N +STGK ANIDSVQLTQATRPMRR+YLENLPASASEK
Sbjct: 568 HDLAAATSLNPSIVKPLPVSFFNAVSTGKNANIDSVQLTQATRPMRRVYLENLPASASEK 627
Query: 319 AVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVEFLTAEDASAALSFDGSVLCGS 378
VMD FNN+LLS GV+HIQQ +PCISC +HKDRGQA+VEFLTAEDASAALSFDGS L GS
Sbjct: 628 VVMDCFNNLLLSSGVNHIQQTRPCISCIVHKDRGQALVEFLTAEDASAALSFDGSKLFGS 687
Query: 379 VVKIRRPKDYVDVATVEPEGSVEDSVRISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAF 438
VKI+RPKDYV+ AT EPE SVE + ISDVV+DSP KIFIGG+S H+SS+ML+EIAG F
Sbjct: 688 TVKIKRPKDYVEFATDEPERSVEVAATISDVVVDSPYKIFIGGISNHISSEMLMEIAGVF 747
Query: 439 GSLKAYHFETEGSNRSCAFLEYVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENG 498
G LKAYHFE SN SCAF+EYVD SVTIKACAGLNGM LGGEVLTVVQAMPDAS +EN
Sbjct: 748 GFLKAYHFEARVSNGSCAFVEYVDHSVTIKACAGLNGMNLGGEVLTVVQAMPDASPVEND 807
Query: 499 DKPPSYGVPEHAKPLLRKPTEVLEIKNV 526
KPPSYG+PEHA+PLLR+PT+VLEIKNV
Sbjct: 808 SKPPSYGIPEHAEPLLREPTQVLEIKNV 835
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 107/177 (60%), Gaps = 19/177 (10%)
Query: 11 KIXKRLSNDTEEVPEXXXXXXXXXXXXVEGRAKYEREIKRKYRNGDDETQQRNDKHVEGR 70
KI + +SND EEVPE EGR KY REI + E R
Sbjct: 213 KIKRLMSNDFEEVPEKKHHRDSDKHIHAEGREKYGREINK-----------------EPR 255
Query: 71 ARYEREIKRKFRNGDDETQERSAKRKQDIAKHHNPHIYEKKDRGEKVKSHYEESTAKXXX 130
A+YEREIKRK+RN DDETQ+R+A RKQDIAKHHNPHIYE+K+R EKVK HYEE T K
Sbjct: 256 AKYEREIKRKYRN-DDETQDRNAMRKQDIAKHHNPHIYERKNRQEKVKPHYEEPTMKRRR 314
Query: 131 XXXXXXXXXXXXXXXXPKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNG 187
P+ HRNTY DGE K++S PSL D SRKKHSD +NRVSTNG
Sbjct: 315 SRSREREDRRKPRSLSPRAHRNTYQDGERKDLSVPSLTDSSRKKHSD-DKNRVSTNG 370
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 147 PKPHRNTYHDGEHKEMSTPSLKDGSRKKHSDVGRNRVSTNG 187
P+ HR Y DGE K++S SL D SRKKHSD +NR+STNG
Sbjct: 391 PRAHRKAYQDGERKDLSMLSLTDSSRKKHSD-DKNRLSTNG 430
>Medtr4g031680.1 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr4:10777189-10770195 | 20130731
Length = 574
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 184/372 (49%), Gaps = 54/372 (14%)
Query: 234 AGWDLPPLQTNNPSPAFVS----------SVVLSNVHDVASASSLNLSNVKLPMSFLNDI 283
+G+DL P + PA V+ S VL N+ + + S LPM + +
Sbjct: 174 SGFDLAPPASMLAGPAAVTGQITVPNPAISGVLPNMFPMGANQMPQFS--ALPMMPIQAM 231
Query: 284 STGKKANIDSVQLTQATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCI 343
+ QATR RR+Y+ LP +A+E++V F+ V+ ++G + +
Sbjct: 232 TQ------------QATRHARRVYVGGLPPTANEQSVAIFFSQVMANIGGNTAGPGDAVV 279
Query: 344 SCTLHKDRGQAIVEFLTAEDASAALSFDGSVLCGSVVKIRRPKDYVD--VATVEPE---- 397
+ ++ D+ A VE + E+AS A++ DG + G+ VK+RRP DY AT+ P
Sbjct: 280 NVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNP 339
Query: 398 ----GSVEDSVRISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---G 450
G+V + S ++ P++IF+GGL + + + E+ FG L+ + + G
Sbjct: 340 NLNLGAVGLTPG-SAGGLEGPDRIFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETG 398
Query: 451 SNRSCAFLEYVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHA 510
+++ AF Y D +VT ACA LNG+K+G + LTV +A + KP + HA
Sbjct: 399 NSKGYAFCVYADLAVTDIACAALNGIKMGDKTLTVRRANQGTTQ----PKPEQESILMHA 454
Query: 511 ------KPLLRKP----TEVLEIKNVFAVESILSLSDMAIEDILEDVRLECARFGTIKSI 560
+ L+ +P T+V+ + N A E + D E+I++D+R EC++FG++ ++
Sbjct: 455 QQQIALQKLIFQPALVATKVVCLTNAVAPEELKEDED--FEEIIDDMRQECSKFGSLVNV 512
Query: 561 NVVKYRSDEHLA 572
+ + + D L+
Sbjct: 513 VIPRPQPDGDLS 524
>Medtr3g005670.1 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313978-307107 | 20130731
Length = 626
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 177/362 (48%), Gaps = 34/362 (9%)
Query: 234 AGWDLPPLQTNNPSPAFVSSVVLSNVHDVASASSLNLSNVKLPMSFLNDISTGKKANIDS 293
+G+D+ P P+ A + + ++ AS + + P+ N + +
Sbjct: 224 SGFDMAP-----PTSAILGATGVAGQITGASPAIPGMFPNMFPLP-TNQVQPFSALPVLP 277
Query: 294 VQ--LTQATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDR 351
VQ QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+
Sbjct: 278 VQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDK 337
Query: 352 GQAIVEFLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV-- 404
A VE + E+AS A++ DG + G+ VK+RRP DY + +P ++ +
Sbjct: 338 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVG 397
Query: 405 --RISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLE 459
S +D P++IF+GG+ + + + E+ FG L+ + + G+++ AF
Sbjct: 398 LSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCV 457
Query: 460 YVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTE 519
Y D +VT ACA LNG+K+G + LTV +A + + ++ KP + HA+ + +
Sbjct: 458 YQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQ 513
Query: 520 VLEIKNVFAVESILSLS----------DMAIEDILEDVRLECARFGTIKSINVVKYRSDE 569
L ++ +L L+ D E+IL+D+R EC++FG + ++ + + R D
Sbjct: 514 KLMLQPALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDG 573
Query: 570 HL 571
L
Sbjct: 574 EL 575
>Medtr3g005670.5 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313978-307107 | 20130731
Length = 585
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 177/362 (48%), Gaps = 34/362 (9%)
Query: 234 AGWDLPPLQTNNPSPAFVSSVVLSNVHDVASASSLNLSNVKLPMSFLNDISTGKKANIDS 293
+G+D+ P P+ A + + ++ AS + + P+ N + +
Sbjct: 224 SGFDMAP-----PTSAILGATGVAGQITGASPAIPGMFPNMFPLP-TNQVQPFSALPVLP 277
Query: 294 VQ--LTQATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDR 351
VQ QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+
Sbjct: 278 VQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDK 337
Query: 352 GQAIVEFLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV-- 404
A VE + E+AS A++ DG + G+ VK+RRP DY + +P ++ +
Sbjct: 338 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVG 397
Query: 405 --RISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLE 459
S +D P++IF+GG+ + + + E+ FG L+ + + G+++ AF
Sbjct: 398 LSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCV 457
Query: 460 YVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTE 519
Y D +VT ACA LNG+K+G + LTV +A + + ++ KP + HA+ + +
Sbjct: 458 YQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQ 513
Query: 520 VLEIKNVFAVESILSLS----------DMAIEDILEDVRLECARFGTIKSINVVKYRSDE 569
L ++ +L L+ D E+IL+D+R EC++FG + ++ + + R D
Sbjct: 514 KLMLQPALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDG 573
Query: 570 HL 571
L
Sbjct: 574 EL 575
>Medtr3g005670.4 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313978-307107 | 20130731
Length = 583
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+ A VE
Sbjct: 282 QATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVE 341
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV----RISD 408
+ E+AS A++ DG + G+ VK+RRP DY + +P ++ + S
Sbjct: 342 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSA 401
Query: 409 VVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLEYVDQSV 465
+D P++IF+GG+ + + + E+ FG L+ + + G+++ AF Y D +V
Sbjct: 402 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 461
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTEVLEIKN 525
T ACA LNG+K+G + LTV +A + + ++ KP + HA+ + + L ++
Sbjct: 462 TDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQKLMLQP 517
Query: 526 VFAVESILSLS----------DMAIEDILEDVRLECARFGTIKSINVVKYRSDEHL 571
+L L+ D E+IL+D+R EC++FG + ++ + + R D L
Sbjct: 518 ALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGEL 573
>Medtr3g005670.2 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313978-307107 | 20130731
Length = 624
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+ A VE
Sbjct: 282 QATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVE 341
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV----RISD 408
+ E+AS A++ DG + G+ VK+RRP DY + +P ++ + S
Sbjct: 342 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSA 401
Query: 409 VVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLEYVDQSV 465
+D P++IF+GG+ + + + E+ FG L+ + + G+++ AF Y D +V
Sbjct: 402 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 461
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTEVLEIKN 525
T ACA LNG+K+G + LTV +A + + ++ KP + HA+ + + L ++
Sbjct: 462 TDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQKLMLQP 517
Query: 526 VFAVESILSLS----------DMAIEDILEDVRLECARFGTIKSINVVKYRSDEHL 571
+L L+ D E+IL+D+R EC++FG + ++ + + R D L
Sbjct: 518 ALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGEL 573
>Medtr2g013130.2 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr2:3475909-3485643 | 20130731
Length = 507
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 40/335 (11%)
Query: 261 DVASASSLNLSNVKLPMSFLNDISTGKKANIDSVQLTQATRPMRRLYLENLPASASEKAV 320
D+A ++ V M + + G N ++QATR RR+Y+ LP A+E+++
Sbjct: 120 DMAPPATGVTPTVSGQMPGIAHMIQGATQNFSPYGISQATRHARRVYVGGLPPFANEQSI 179
Query: 321 MDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVEFLTAEDASAALSFDGSVLCGSVV 380
F+ V++++G + ++ ++ ++ A VE T E+AS A++ DG V G V
Sbjct: 180 ASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVAV 239
Query: 381 KIRRPKDY-----VDVATVEPEGSVE-DSVRISDVVI---DSPNKIFIGGLSKHLSSDML 431
++RRP DY + +P ++ +V +S I + ++IF+GGL + + +
Sbjct: 240 RVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGGAEGLDRIFVGGLPYYFTEVQM 299
Query: 432 VEIAGAFGSLKAYHF---ETEGSNRSCAFLEYVDQSVTIKACAGLNGMKLGGEVLTVVQA 488
E+ AFG L+++ + G+++ F Y D +VT ACA LNG+K+G + LTV +A
Sbjct: 300 RELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTDIACAALNGLKMGDKTLTVRRA 359
Query: 489 MPDASSLENGDKPPSY--------------------GVPEHAKPLLRKPTEVLEIKNVFA 528
A S D + GVP + + PT+VL +
Sbjct: 360 TVSAHSKPEEDNIFARAQQHIAMQKIALEVVGLNIPGVPTNDE----SPTKVLCLTEAVT 415
Query: 529 VESILSLSDMAIEDILEDVRLECARFGTIKSINVV 563
E + + E+ILED+R EC +FGT+ +NVV
Sbjct: 416 TEQLTDNGEY--EEILEDMRDECRKFGTL--VNVV 446
>Medtr3g005670.7 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313978-307107 | 20130731
Length = 626
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+ A VE
Sbjct: 284 QATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVE 343
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV----RISD 408
+ E+AS A++ DG + G+ VK+RRP DY + +P ++ + S
Sbjct: 344 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSA 403
Query: 409 VVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLEYVDQSV 465
+D P++IF+GG+ + + + E+ FG L+ + + G+++ AF Y D +V
Sbjct: 404 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 463
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTEVLEIKN 525
T ACA LNG+K+G + LTV +A + + ++ KP + HA+ + + L ++
Sbjct: 464 TDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQKLMLQP 519
Query: 526 VFAVESILSLS----------DMAIEDILEDVRLECARFGTIKSINVVKYRSDEHL 571
+L L+ D E+IL+D+R EC++FG + ++ + + R D L
Sbjct: 520 ALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGEL 575
>Medtr3g005670.6 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313978-307107 | 20130731
Length = 624
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+ A VE
Sbjct: 282 QATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVE 341
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV----RISD 408
+ E+AS A++ DG + G+ VK+RRP DY + +P ++ + S
Sbjct: 342 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSA 401
Query: 409 VVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLEYVDQSV 465
+D P++IF+GG+ + + + E+ FG L+ + + G+++ AF Y D +V
Sbjct: 402 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 461
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTEVLEIKN 525
T ACA LNG+K+G + LTV +A + + ++ KP + HA+ + + L ++
Sbjct: 462 TDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQKLMLQP 517
Query: 526 VFAVESILSLS----------DMAIEDILEDVRLECARFGTIKSINVVKYRSDEHL 571
+L L+ D E+IL+D+R EC++FG + ++ + + R D L
Sbjct: 518 ALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGEL 573
>Medtr3g005670.3 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr3:313745-308216 | 20130731
Length = 564
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 170/348 (48%), Gaps = 34/348 (9%)
Query: 234 AGWDLPPLQTNNPSPAFVSSVVLSNVHDVASASSLNLSNVKLPMSFLNDISTGKKANIDS 293
+G+D+ P P+ A + + ++ AS + + P+ N + +
Sbjct: 224 SGFDMAP-----PTSAILGATGVAGQITGASPAIPGMFPNMFPLP-TNQVQPFSALPVLP 277
Query: 294 VQ--LTQATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDR 351
VQ QATR RR+Y+ L +A+E++V F+ V+ ++G + ++ ++ D+
Sbjct: 278 VQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDK 337
Query: 352 GQAIVEFLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDSV-- 404
A VE + E+AS A++ DG + G+ VK+RRP DY + +P ++ +
Sbjct: 338 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVG 397
Query: 405 --RISDVVIDSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHFETE---GSNRSCAFLE 459
S +D P++IF+GG+ + + + E+ FG L+ + + G+++ AF
Sbjct: 398 LSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCV 457
Query: 460 YVDQSVTIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSYGVPEHAKPLLRKPTE 519
Y D +VT ACA LNG+K+G + LTV +A + + ++ KP + HA+ + +
Sbjct: 458 YQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQ--PKPEQESILMHAQQQI--ALQ 513
Query: 520 VLEIKNVFAVESILSLS----------DMAIEDILEDVRLECARFGTI 557
L ++ +L L+ D E+IL+D+R EC++FG I
Sbjct: 514 KLMLQPALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNI 561
>Medtr2g013130.1 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr2:3475903-3485643 | 20130731
Length = 522
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 40/298 (13%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ LP A+E+++ F+ V++++G + ++ ++ ++ A VE
Sbjct: 172 QATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVE 231
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVE-DSVRISDVVI 411
T E+AS A++ DG V G V++RRP DY + +P ++ +V +S I
Sbjct: 232 MRTVEEASNAMALDGIVFEGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTI 291
Query: 412 ---DSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHF---ETEGSNRSCAFLEYVDQSV 465
+ ++IF+GGL + + + E+ AFG L+++ + G+++ F Y D +V
Sbjct: 292 GGAEGLDRIFVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAV 351
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSY--------------------G 505
T ACA LNG+K+G + LTV +A A S D + G
Sbjct: 352 TDIACAALNGLKMGDKTLTVRRATVSAHSKPEEDNIFARAQQHIAMQKIALEVVGLNIPG 411
Query: 506 VPEHAKPLLRKPTEVLEIKNVFAVESILSLSDMAIEDILEDVRLECARFGTIKSINVV 563
VP + + PT+VL + E + + E+ILED+R EC +FGT+ +NVV
Sbjct: 412 VPTNDE----SPTKVLCLTEAVTTEQLTDNGEY--EEILEDMRDECRKFGTL--VNVV 461
>Medtr2g013130.4 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr2:3477024-3485643 | 20130731
Length = 359
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 38/308 (12%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ LP A+E+++ F+ V++++G + ++ ++ ++ A VE
Sbjct: 9 QATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVE 68
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVEDS-VRISDVVI 411
T E+AS A++ DG V G V++RRP DY + +P ++ S V +S I
Sbjct: 69 MRTVEEASNAMALDGIVFEGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTI 128
Query: 412 ---DSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHF---ETEGSNRSCAFLEYVDQSV 465
+ ++IF+GGL + + + E+ AFG L+++ + G+++ F Y D +V
Sbjct: 129 GGAEGLDRIFVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAV 188
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSY--------------------G 505
T ACA LNG+K+G + LTV +A A S D + G
Sbjct: 189 TDIACAALNGLKMGDKTLTVRRATVSAHSKPEEDNIFARAQQHIAMQKIALEVVGLNIPG 248
Query: 506 VPEHAKPLLRKPTEVLEIKNVFAVESILSLSDMAIEDILEDVRLECARFGTIKSINVVKY 565
VP + + PT+VL + E + + E+ILED+R EC +FGT+ ++ + +
Sbjct: 249 VPTNDE----SPTKVLCLTEAVTTEQLTDNGEY--EEILEDMRDECRKFGTLVNVVIPRP 302
Query: 566 RSDEHLAT 573
+ L+T
Sbjct: 303 NPNGELST 310
>Medtr2g013130.3 | U2 snRNP auxilliary factor, large subunit,
splicing factor | HC | chr2:3477024-3485643 | 20130731
Length = 402
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 38/308 (12%)
Query: 298 QATRPMRRLYLENLPASASEKAVMDGFNNVLLSVGVHHIQQAQPCISCTLHKDRGQAIVE 357
QATR RR+Y+ LP A+E+++ F+ V++++G + ++ ++ ++ A VE
Sbjct: 52 QATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVE 111
Query: 358 FLTAEDASAALSFDGSVLCGSVVKIRRPKDY-----VDVATVEPEGSVE-DSVRISDVVI 411
T E+AS A++ DG V G V++RRP DY + +P ++ +V +S I
Sbjct: 112 MRTVEEASNAMALDGIVFEGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTI 171
Query: 412 ---DSPNKIFIGGLSKHLSSDMLVEIAGAFGSLKAYHF---ETEGSNRSCAFLEYVDQSV 465
+ ++IF+GGL + + + E+ AFG L+++ + G+++ F Y D +V
Sbjct: 172 GGAEGLDRIFVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAV 231
Query: 466 TIKACAGLNGMKLGGEVLTVVQAMPDASSLENGDKPPSY--------------------G 505
T ACA LNG+K+G + LTV +A A S D + G
Sbjct: 232 TDIACAALNGLKMGDKTLTVRRATVSAHSKPEEDNIFARAQQHIAMQKIALEVVGLNIPG 291
Query: 506 VPEHAKPLLRKPTEVLEIKNVFAVESILSLSDMAIEDILEDVRLECARFGTIKSINVVKY 565
VP + + PT+VL + E + + E+ILED+R EC +FGT+ ++ + +
Sbjct: 292 VPTNDE----SPTKVLCLTEAVTTEQLTDNGEY--EEILEDMRDECRKFGTLVNVVIPRP 345
Query: 566 RSDEHLAT 573
+ L+T
Sbjct: 346 NPNGELST 353