Miyakogusa Predicted Gene

Lj5g3v2298230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2298230.1 tr|G5AWN5|G5AWN5_HETGA Transmembrane protein 120B
OS=Heterocephalus glaber GN=GW7_03111 PE=4 SV=1,25.63,1e-18,seg,NULL;
coiled-coil,NULL; TMPIT,TMPIT-like; TRANSMEMBRANE PROTEIN INDUCED BY
TUMOR NECROSIS FACTOR,CUFF.57328.1
         (359 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10430.3 | Symbols:  | TMPIT-like protein | chr4:6455110-6457...   492   e-139
AT4G10430.1 | Symbols:  | TMPIT-like protein | chr4:6455110-6457...   492   e-139
AT1G33230.1 | Symbols:  | TMPIT-like protein | chr1:12046844-120...   474   e-134
AT4G10430.2 | Symbols:  | TMPIT-like protein | chr4:6455153-6457...   350   1e-96

>AT4G10430.3 | Symbols:  | TMPIT-like protein | chr4:6455110-6457996
           REVERSE LENGTH=347
          Length = 347

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/349 (67%), Positives = 279/349 (79%), Gaps = 3/349 (0%)

Query: 11  KIDESVSSVLEEAKELQESVSNHISKTLSDEQPLRQRALALDSKIHXXXXXXXXXXHNKL 70
           +++E V  +++E KEL +S ++ IS +   E  LRQ+A A+DS I            NK 
Sbjct: 2   EVEEEVKQIIDEVKELHDSAASFISSSSQQELSLRQKASAVDSSIRRLHSTIVS---NKN 58

Query: 71  INPSVADKLDEDLQRARCIVVDGDASSLLPGHAQGSFLRMFLGPINVRASRKDVQLKVKE 130
           ++P + +KL+EDL RARC++VDG+ SS LP   QG F+RMF GP+NVRA RKDVQLKVKE
Sbjct: 59  LDPKLVEKLEEDLHRARCMLVDGETSSFLPSKPQGRFVRMFCGPVNVRALRKDVQLKVKE 118

Query: 131 EYNSYRDRTAXXXXXXXXXXXXXRSWLWDGCLPAFPVQIYQAWLLFLYTGLALRENILRV 190
           EYN YRD+TA             RS+ W GCLPAFPVQ+Y+AWLLFLY GLA+RENILR 
Sbjct: 119 EYNRYRDKTALLFLFFPATLLILRSYYWGGCLPAFPVQLYEAWLLFLYAGLAMRENILRA 178

Query: 191 NGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPDCAKKQRGVQLFLQWAMMQGVAMLLQNR 250
           NGSDIRPWW+YHHYCAM MALVSLTWEIKGQP+C +KQRGV LFLQWAMMQGVAMLLQNR
Sbjct: 179 NGSDIRPWWLYHHYCAMAMALVSLTWEIKGQPNCVQKQRGVHLFLQWAMMQGVAMLLQNR 238

Query: 251 YQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPVLFILQGFEAYIGLLLLRTAFVG 310
           YQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCP+LFILQ FEAY+GLLLLR    G
Sbjct: 239 YQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTG 298

Query: 311 VISEWQVIFCGVLLVLMAIGNFANTVQTLLAKSRFKAKMRKSKSKQRLN 359
           V++EWQV+ CG+LLV+MA+GNF NTV+TL+AKSR KAKM++SKS+  LN
Sbjct: 299 VVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKSRAELN 347


>AT4G10430.1 | Symbols:  | TMPIT-like protein | chr4:6455110-6457996
           REVERSE LENGTH=347
          Length = 347

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/349 (67%), Positives = 279/349 (79%), Gaps = 3/349 (0%)

Query: 11  KIDESVSSVLEEAKELQESVSNHISKTLSDEQPLRQRALALDSKIHXXXXXXXXXXHNKL 70
           +++E V  +++E KEL +S ++ IS +   E  LRQ+A A+DS I            NK 
Sbjct: 2   EVEEEVKQIIDEVKELHDSAASFISSSSQQELSLRQKASAVDSSIRRLHSTIVS---NKN 58

Query: 71  INPSVADKLDEDLQRARCIVVDGDASSLLPGHAQGSFLRMFLGPINVRASRKDVQLKVKE 130
           ++P + +KL+EDL RARC++VDG+ SS LP   QG F+RMF GP+NVRA RKDVQLKVKE
Sbjct: 59  LDPKLVEKLEEDLHRARCMLVDGETSSFLPSKPQGRFVRMFCGPVNVRALRKDVQLKVKE 118

Query: 131 EYNSYRDRTAXXXXXXXXXXXXXRSWLWDGCLPAFPVQIYQAWLLFLYTGLALRENILRV 190
           EYN YRD+TA             RS+ W GCLPAFPVQ+Y+AWLLFLY GLA+RENILR 
Sbjct: 119 EYNRYRDKTALLFLFFPATLLILRSYYWGGCLPAFPVQLYEAWLLFLYAGLAMRENILRA 178

Query: 191 NGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPDCAKKQRGVQLFLQWAMMQGVAMLLQNR 250
           NGSDIRPWW+YHHYCAM MALVSLTWEIKGQP+C +KQRGV LFLQWAMMQGVAMLLQNR
Sbjct: 179 NGSDIRPWWLYHHYCAMAMALVSLTWEIKGQPNCVQKQRGVHLFLQWAMMQGVAMLLQNR 238

Query: 251 YQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPVLFILQGFEAYIGLLLLRTAFVG 310
           YQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCP+LFILQ FEAY+GLLLLR    G
Sbjct: 239 YQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTG 298

Query: 311 VISEWQVIFCGVLLVLMAIGNFANTVQTLLAKSRFKAKMRKSKSKQRLN 359
           V++EWQV+ CG+LLV+MA+GNF NTV+TL+AKSR KAKM++SKS+  LN
Sbjct: 299 VVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKSRAELN 347


>AT1G33230.1 | Symbols:  | TMPIT-like protein |
           chr1:12046844-12049794 FORWARD LENGTH=347
          Length = 347

 Score =  474 bits (1219), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/337 (67%), Positives = 269/337 (79%), Gaps = 3/337 (0%)

Query: 22  EAKELQESVSNHISKTLSDEQPLRQRALALDSKIHXXXXXXXXXXHNKLINPSVADKLDE 81
           + KEL +S ++ +S +  +E  LR RA  +DS I           H   ++P + +KL+E
Sbjct: 14  QVKELHDSSTSFVSSSSQEELSLRNRASVVDSSIRRLHSTLASDKH---LDPKLFEKLEE 70

Query: 82  DLQRARCIVVDGDASSLLPGHAQGSFLRMFLGPINVRASRKDVQLKVKEEYNSYRDRTAX 141
           DLQRARC++ DGD SS LP   QG F+RMFLGP+NVRASRKD+QLKVKEEYNSYRDRTA 
Sbjct: 71  DLQRARCMLADGDTSSFLPSKPQGRFVRMFLGPVNVRASRKDIQLKVKEEYNSYRDRTAL 130

Query: 142 XXXXXXXXXXXXRSWLWDGCLPAFPVQIYQAWLLFLYTGLALRENILRVNGSDIRPWWIY 201
                       RS++WDGCLPAFPVQ+YQAWLLFLY GL +RENILR NGSDIR WW+Y
Sbjct: 131 LFLVFPAILLTLRSYVWDGCLPAFPVQLYQAWLLFLYAGLVMRENILRANGSDIRSWWLY 190

Query: 202 HHYCAMLMALVSLTWEIKGQPDCAKKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIA 261
           HHY AM M+LVSLTWEIKGQP+C +KQ+GV+LFLQWAMMQGVAMLLQNRYQRQRLYTRIA
Sbjct: 191 HHYFAMAMSLVSLTWEIKGQPNCVQKQKGVRLFLQWAMMQGVAMLLQNRYQRQRLYTRIA 250

Query: 262 LGKAKRMDVVWGETAGVDGQLWLLCPVLFILQGFEAYIGLLLLRTAFVGVISEWQVIFCG 321
           LGKAKRMDVVWGETAGVDGQL LL P+LF LQGFEAY+G  LLRT  +GV++EWQV+ CG
Sbjct: 251 LGKAKRMDVVWGETAGVDGQLLLLFPILFTLQGFEAYVGFQLLRTVLMGVVAEWQVLVCG 310

Query: 322 VLLVLMAIGNFANTVQTLLAKSRFKAKMRKSKSKQRL 358
           +LLV+MAIGNF NTV+TL+ KSRFKAKM++SKS+  L
Sbjct: 311 ILLVVMAIGNFINTVETLMVKSRFKAKMKRSKSRAEL 347


>AT4G10430.2 | Symbols:  | TMPIT-like protein | chr4:6455153-6457690
           REVERSE LENGTH=250
          Length = 250

 Score =  350 bits (897), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 162/205 (79%), Positives = 176/205 (85%)

Query: 89  IVVDGDASSLLPGHAQGSFLRMFLGPINVRASRKDVQLKVKEEYNSYRDRTAXXXXXXXX 148
           ++VDG+ SS LP   QG F+RMF GP+NVRA RKDVQLKVKEEYN YRD+TA        
Sbjct: 1   MLVDGETSSFLPSKPQGRFVRMFCGPVNVRALRKDVQLKVKEEYNRYRDKTALLFLFFPA 60

Query: 149 XXXXXRSWLWDGCLPAFPVQIYQAWLLFLYTGLALRENILRVNGSDIRPWWIYHHYCAML 208
                RS+ W GCLPAFPVQ+Y+AWLLFLY GLA+RENILR NGSDIRPWW+YHHYCAM 
Sbjct: 61  TLLILRSYYWGGCLPAFPVQLYEAWLLFLYAGLAMRENILRANGSDIRPWWLYHHYCAMA 120

Query: 209 MALVSLTWEIKGQPDCAKKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRM 268
           MALVSLTWEIKGQP+C +KQRGV LFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRM
Sbjct: 121 MALVSLTWEIKGQPNCVQKQRGVHLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRM 180

Query: 269 DVVWGETAGVDGQLWLLCPVLFILQ 293
           DVVWGETAGVDGQLWLLCP+LFILQ
Sbjct: 181 DVVWGETAGVDGQLWLLCPILFILQ 205