Miyakogusa Predicted Gene
- Lj5g3v2298230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2298230.1 tr|G5AWN5|G5AWN5_HETGA Transmembrane protein 120B
OS=Heterocephalus glaber GN=GW7_03111 PE=4 SV=1,25.63,1e-18,seg,NULL;
coiled-coil,NULL; TMPIT,TMPIT-like; TRANSMEMBRANE PROTEIN INDUCED BY
TUMOR NECROSIS FACTOR,CUFF.57328.1
(1080 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71427 similar to UniRef100_A7QIZ7 Cluster: Chromosome... 2141 0.0
>gnl|LJGI|TC71427 similar to UniRef100_A7QIZ7 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1540
Score = 2141 bits (1080), Expect = 0.0
Identities = 1080/1080 (100%)
Strand = Plus / Plus
Query: 1 atggaagaaacaagtagtgcagagattgagaagatagatgaatcagtgtcgagcgtgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atggaagaaacaagtagtgcagagattgagaagatagatgaatcagtgtcgagcgtgttg 80
Query: 61 gaagaagcgaaagagcttcaggaatcagtttccaatcacatctcgaagacgctaagcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gaagaagcgaaagagcttcaggaatcagtttccaatcacatctcgaagacgctaagcgat 140
Query: 121 gagcaaccacttcgccaacgtgccctcgctctcgactccaaaatccactctcttcgttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gagcaaccacttcgccaacgtgccctcgctctcgactccaaaatccactctcttcgttct 200
Query: 181 tccctcgattctctgctccacaacaagctcatcaacccttccgtagcggataagttggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctcgattctctgctccacaacaagctcatcaacccttccgtagcggataagttggat 260
Query: 241 gaggatttgcagcgagcacgctgcatcgtcgttgatggcgatgcttcttcactccttcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggatttgcagcgagcacgctgcatcgtcgttgatggcgatgcttcttcactccttcct 320
Query: 301 ggccatgctcaaggaagttttttgaggatgtttcttggccctattaatgtgcgtgcctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccatgctcaaggaagttttttgaggatgtttcttggccctattaatgtgcgtgcctct 380
Query: 361 aggaaggatgttcagcttaaggtcaaagaggaatacaacagttacagggatagaactgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaggatgttcagcttaaggtcaaagaggaatacaacagttacagggatagaactgcc 440
Query: 421 ctgctcttcctgctatttccatcaatactgcttattctaagatcttggctttgggatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctcttcctgctatttccatcaatactgcttattctaagatcttggctttgggatgga 500
Query: 481 tgcttgccagcttttcctgtccagatttaccaggcctggctgctatttctttacactggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcttgccagcttttcctgtccagatttaccaggcctggctgctatttctttacactggt 560
Query: 541 ttggcattgcgagagaacatattgagagtcaatggaagtgatatccgaccatggtggata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggcattgcgagagaacatattgagagtcaatggaagtgatatccgaccatggtggata 620
Query: 601 tatcaccattactgtgctatgttaatggcccttgtgagtctcacttgggaaattaaagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcaccattactgtgctatgttaatggcccttgtgagtctcacttgggaaattaaagga 680
Query: 661 caaccagattgtgcgaaaaagcagagaggcgtacaacttttcctacagtgggctatgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaccagattgtgcgaaaaagcagagaggcgtacaacttttcctacagtgggctatgatg 740
Query: 721 cagggagttgcaatgcttttgcaaaatagatatcaacgccaaagactttatactcgtatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagggagttgcaatgcttttgcaaaatagatatcaacgccaaagactttatactcgtatt 800
Query: 781 gcattgggaaaggctaaaaggatggatgttgtatggggtgaaacagctggtgtcgatggc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcattgggaaaggctaaaaggatggatgttgtatggggtgaaacagctggtgtcgatggc 860
Query: 841 caactgtggttgttgtgtcccgtacttttcatattgcagggattcgaagcatatatcgga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 caactgtggttgttgtgtcccgtacttttcatattgcagggattcgaagcatatatcgga 920
Query: 901 ctattattgctccggaccgcatttgttggcgttatttctgagtggcaggtcatattttgt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 ctattattgctccggaccgcatttgttggcgttatttctgagtggcaggtcatattttgt 980
Query: 961 ggtgtcctgttggtcctaatggctattgggaactttgcaaatactgtacagactctgtta 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 ggtgtcctgttggtcctaatggctattgggaactttgcaaatactgtacagactctgtta 1040
Query: 1021 gcaaagtctagatttaaggcaaagatgagaaaaagcaagagcaagcagagactgaattag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gcaaagtctagatttaaggcaaagatgagaaaaagcaagagcaagcagagactgaattag 1100