Miyakogusa Predicted Gene

Lj5g3v2297880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2297880.1 tr|A9SWQ1|A9SWQ1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_231423,27.84,0.000000000000003,seg,NULL;
coiled-coil,NULL,CUFF.57255.1
         (724 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g03610.1                                                       598   e-171
Glyma04g03540.1                                                       380   e-105

>Glyma06g03610.1 
          Length = 726

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 373/773 (48%), Positives = 451/773 (58%), Gaps = 104/773 (13%)

Query: 1   MEIEGDFDLLPSSPVVHARKLKRLKKATTAPEY----LSPPTFXXXXXXXXXXXXXLNLR 56
           ME + DFDLLP SP+   RKLKRLK+A   PE     +SPP F              N R
Sbjct: 1   MESDDDFDLLPPSPI-QERKLKRLKQADRVPEPSHLPISPPNFSESGNGEEHLTQS-NGR 58

Query: 57  SVPEPESLGDG-------------NVAVEENGLGARRALEFDSVADXXXXXXXXXX---- 99
           S PE E+L                 V V+++GL A+RAL+FDS+++              
Sbjct: 59  SGPEIETLATSPSPSPSSQSDTPKGVTVDDDGLVAKRALDFDSLSEEHGKIAEESEEVRD 118

Query: 100 -XKGEEIGDLNTHESEKKRPSSDVVSENXXXXXXXXXRIDDGGDGSEKNPKEATSSKRKT 158
               EEIGDLNT E E+KR S D + E          RID  GDGSEK P E+ ++KRKT
Sbjct: 119 LKTNEEIGDLNTGEVERKRRSLDDLPE---KNGKKKKRIDHDGDGSEKKPNESATNKRKT 175

Query: 159 EKERRENLKHLRAESQRLLRESRDASFKPIPLVQKPISSVLDKIRKRKSEIMKKFSASFX 218
           EKERR+ LK LRAES RLLRE+RDA+FKP PLVQKPISS+L+KIR+RK EI++K +    
Sbjct: 176 EKERRDTLKQLRAESHRLLRETRDAAFKPAPLVQKPISSILEKIRQRKLEILQKSA---- 231

Query: 219 XXXXXXXXXXXSERPLLREDIPEKVENSDQEETLASCPVGANDDLNTSHSGG-SDEAADS 277
                                 + VE +  EET A+CP     +L+TSH G  S++AA S
Sbjct: 232 ----------------------DNVEKAGPEETPATCPAATRTNLDTSHIGEESNDAAAS 269

Query: 278 PIPKSTPSPVAMA-------------------------SESERAFRAPIDDTQELFSDSQ 312
              +S PSP+ +                          SESE AFRAPID          
Sbjct: 270 SNSRSIPSPMLVYLILVSLMLRCHCHLIHCIVEFQTKDSESEHAFRAPID---------- 319

Query: 313 ISDTKEETVNEKLDNTPEQVFAPSMLSMNLELDSAPPXXXXXXXXXXXXXXXXA--PPLR 370
                 E VNEK +N  E+VFAP ML+MNL+LDSAPP                   P + 
Sbjct: 320 ------EAVNEKSNNPSEEVFAPLMLAMNLKLDSAPPDDYVSSDEEEEDNDKENIEPCVH 373

Query: 371 GSVGLNSPPSGDPVRAFVXXXXXXXXXXXXXLQCXXXXXXXXXXXXXXXXXNAMIATQFE 430
            SV    PP+GDPVRAFV             LQ                  + MIATQ+E
Sbjct: 374 VSVDSTLPPNGDPVRAFVDEEAEEEDDSDNELQLFQDDEGEEDDDDIEE--DDMIATQYE 431

Query: 431 EKPVDREKRDQLHQQWLEQQDMAGMDNLLQKLNCGSKLXXXXXXXXXXXXXXXXXXXXXX 490
           EKP DREK DQLHQQWLEQQD AGMDNL QK NCGSKL                      
Sbjct: 432 EKPDDREKHDQLHQQWLEQQDAAGMDNLHQKFNCGSKLNETPSTEEEDEESRETVNDDE- 490

Query: 491 XVEDHIAPSESAKINLKKAKQMLPHMFSHKEEAYVSSDDEEAEERLTKECLFYKAEKETK 550
             E++ APS+S ++ LKK KQM+P MFS K++ YVSSDDEE E++L ++ L+YK E++ K
Sbjct: 491 -AEEYTAPSKSLRVTLKKVKQMIPQMFSDKDDKYVSSDDEETEDKLARQSLYYKTEEKAK 549

Query: 551 FFSPAEDESSKEVFSLIKKLNIVPDPKRKGRPPPSIFDMPRIGQSINISSKSSFVGRASN 610
           FFSP EDE+S+EVFSLIKK N VPD KRKG+   SIF MP IGQ+INISSKSSFVGRAS+
Sbjct: 550 FFSPGEDENSREVFSLIKKFN-VPDIKRKGKTT-SIFAMPSIGQNINISSKSSFVGRASD 607

Query: 611 HFMPSSKKHGPSKARAYIFGRDDSNSRTSLSISEDSSDTIQRESQPPKTASAKFQRNTQN 670
           HFMP+S+K G  K R+YIFGRDDSNSR+S+ +SEDSSDTIQ ESQPPK ASAKFQRN QN
Sbjct: 608 HFMPTSRKQGSCKVRSYIFGRDDSNSRSSILMSEDSSDTIQTESQPPKAASAKFQRNMQN 667

Query: 671 KYTPLDSEPPKSNVSLFEILRKSSLHTERCVQNARVQQKESTIFDAFKLAKKP 723
           K T L+S   +S+VSL +ILRKS  H +   QN  VQ K ++IFDAFKL KKP
Sbjct: 668 KNTTLNSASKESSVSLLDILRKSLHHADHSFQNVNVQPK-TSIFDAFKLVKKP 719


>Glyma04g03540.1 
          Length = 612

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 266/612 (43%), Positives = 326/612 (53%), Gaps = 84/612 (13%)

Query: 1   MEIEGDFDLLPSSPVVHARKLKRLKKATTAPE----YLSPPTFXXXXXXXXXXXXXLNLR 56
           ME + DF+LLP SPV   RKLKRLKKA   PE     +SPP F              N  
Sbjct: 1   MESDDDFELLPPSPV-QERKLKRLKKAARVPEPSHPPISPPNFSVSGNGEEHLTEP-NGE 58

Query: 57  SVPEPESLGDG-------------------NVAVEENGLGARRALEFDSVADX-----XX 92
           S PE E+L                       V V+++GLGA+R L+FDS  +        
Sbjct: 59  SGPEFETLTPSPSPSPSPSPNPNPQSDTPKGVTVDDDGLGAKRVLDFDSFGEELGKVVEE 118

Query: 93  XXXXXXXXKGEEIGDLNTHESEKKRPSSDVVSENXXXXXXXXXRIDDGGDGSEKNPKEAT 152
                     EEI DLNT E E+KR   D + E          RI+D GD SEK P    
Sbjct: 119 TEEVRDLKTYEEIRDLNTDEVERKRRGLDDLPEK----NEKKKRINDDGDSSEKKP---- 170

Query: 153 SSKRKTEKERRENLKHLRAESQRLLRESRDASFKPIPLVQKPISSVLDKIRKRKSEIMKK 212
                  KERR+ LK L+AESQRLLRE+RDA+FKP PLVQKPISS+L+KIR+RK EI+KK
Sbjct: 171 -------KERRDTLKQLQAESQRLLRETRDAAFKPAPLVQKPISSILEKIRQRKLEILKK 223

Query: 213 FSASFXXXXXXXXXXXXSERPLLREDIPEKVENSDQEETLASCPVGANDDLNTSHSG-GS 271
                                       + VE ++ EET ASC      +L TSH G  S
Sbjct: 224 KHTHVYLVCRSA----------------DNVEKAEPEETPASCHAATKCNLGTSHIGEES 267

Query: 272 DEAADSPIPKSTPSPVAMASESERAFRAPIDDTQELFSDSQISDTKEETVNEKLDNTPEQ 331
           ++AA +   +S PSP  M S+             EL++DS+ SDTK+E VN+K +N  E+
Sbjct: 268 NDAAANSNSESIPSP--MVSQI------------ELYTDSERSDTKDEAVNDKSNNPSEE 313

Query: 332 VFAPSMLSMNLELDSAPPXXXXXXXXXXXXXXXXA--PPLRGSVGLNSPPSGDPVRAFVX 389
           VFAPSML+MNL+LDSAPP                   P +  SV L   P GDPVRAFV 
Sbjct: 314 VFAPSMLAMNLKLDSAPPDDDVSSNEEEEDNDKENIEPHVHVSVDLTLSPDGDPVRAFVD 373

Query: 390 XXXXXXXXXXXXLQCXXXXXXXXXXXXXXXXXNAMIATQFEEKPVDREKRDQLHQQWLEQ 449
                       LQ                  + MIATQ+EEKP DREKR+QLHQQW EQ
Sbjct: 374 EEAEEEDDSDNDLQ---RFQDDEGEDDDDIEEDDMIATQYEEKPDDREKREQLHQQWHEQ 430

Query: 450 QDMAGMDNLLQKLNCGSKLXXXXXXXXXXXXXXXXXXXXXXXVEDHIAPSESAKINLKKA 509
           +D AG+DNL QK   GSKL                       VE++ APSES K  LKK 
Sbjct: 431 RDAAGVDNLRQKFYGGSKL--NETPSTEEEDEESRETENDDEVEEYAAPSESLKTTLKKV 488

Query: 510 KQMLPHMFSHKEEAYVSSDDEEAEERLTKECLFYKAEKETKFFSPAEDESSKEVFSLIKK 569
           KQM+P MFS K++ YVSSDDEE E++L ++ L+YK E++ KFFSPAEDE+S+EVFSLIKK
Sbjct: 489 KQMIPQMFSDKDDKYVSSDDEETEDKLARQSLYYKTEEKAKFFSPAEDENSREVFSLIKK 548

Query: 570 LNIVPDPKRKGR 581
           LN VPD KRKG+
Sbjct: 549 LN-VPDTKRKGK 559