Miyakogusa Predicted Gene

Lj5g3v2297880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2297880.1 tr|A9SWQ1|A9SWQ1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_231423,27.84,0.000000000000003,seg,NULL;
coiled-coil,NULL,CUFF.57255.1
         (724 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111740.1 | hypothetical protein | HC | chr3:52274077-5226...   660   0.0  
Medtr3g111740.2 | hypothetical protein | HC | chr3:52274077-5227...   480   e-135

>Medtr3g111740.1 | hypothetical protein | HC |
           chr3:52274077-52269700 | 20130731
          Length = 733

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/741 (53%), Positives = 476/741 (64%), Gaps = 31/741 (4%)

Query: 1   MEIEGDFDLLPSSPVVHARKLKRLKKATTAPE----YLSPPTFXXXXXXXXXXXXXLNLR 56
           M+ + DF+ LPSSPV+  RKLKRLKKA+   E    + SP  F             +++R
Sbjct: 1   MDSDEDFEALPSSPVIE-RKLKRLKKASRVSENPLPFSSPIKFSGSEQNSGLE---VSIR 56

Query: 57  -SVPEPESLGDGNVA--VEENGLGARRALEFDSVADXXXXXXXXXXXKGEEIGDLNTHES 113
            SVPE ESLG  NV   VEEN LGA+R LEF+S+ D             EE GD NT E 
Sbjct: 57  GSVPEVESLGGENVTDTVEENDLGAKRVLEFESMDDELDARVPEKTI--EESGDKNTVEL 114

Query: 114 EKKRPSSDVVSENXXXXXXXXXRID--------DGGDGSEKNPKEATSSKRKTEKERREN 165
           E K+PS + VSE            +        D  +GSEK  KE+ S+KRK EKERREN
Sbjct: 115 EIKQPSVEEVSEKKEEISEKKGNKNKKSKKKGSDDDNGSEKKLKESISNKRKAEKERREN 174

Query: 166 LKHLRAESQRLLRESRDASFKPIPLVQKPISSVLDKIRKRKSEIMKKFSASFXXXXXXXX 225
           LK LRAESQRLLRE+RDA+FKP+PLVQKPISS+LDKIRKRK E +KK + SF        
Sbjct: 175 LKQLRAESQRLLRETRDAAFKPVPLVQKPISSILDKIRKRKLEFLKKSNVSFHDNDGFHV 234

Query: 226 XXXXSERPLLREDIPEKVENSDQEETLASCPVGANDDLNTSHSGGSDEAADSPIPKSTPS 285
                 RP   E+I  K+EN++ EET A+ P  A +DL+T H  GS +AAD    +S PS
Sbjct: 235 DIDSDPRP--SEEITNKIENAESEETPATRP--AENDLSTLHIDGSTDAADHSSRESIPS 290

Query: 286 PVAMASESERAFRAPIDDTQELFSDSQISDTKEETVNEKLDNTPEQVFAPSMLSMNLELD 345
           P+ + SE+  AFRAP+DDTQ+LFSDS+I+D KEE +N KL+   E+VFAPSMLSMNL+LD
Sbjct: 291 PMDVVSETIHAFRAPVDDTQDLFSDSEINDIKEEALNGKLNKPSEEVFAPSMLSMNLKLD 350

Query: 346 SAPPXXXXXXXXXXXXXXXXAPPLRGSVGLNSPPSGDPVRAFVXXXXXXXXXXXXXLQCX 405
           SAP                  P L GS  L+ P SGDPV+AFV             LQ  
Sbjct: 351 SAPVDDDMSSDDEDNDKENTVPHLHGSADLSLPASGDPVKAFVDEEAEEEDDSDNDLQ-R 409

Query: 406 XXXXXXXXXXXXXXXXNAMIATQFEEKPVDREKRDQLHQQWLEQQDMAGMDNLLQKLNCG 465
                           N MIAT +EE P+DREKRDQLHQQWLEQQD  GMDNLLQKLNCG
Sbjct: 410 FQDNEEGDNDDDIEELNDMIATGYEEAPIDREKRDQLHQQWLEQQDTTGMDNLLQKLNCG 469

Query: 466 SKLXXXXXXXXXXXXXXXXXXXXX-XXVEDHIAPSESAKINLKKAKQMLPHMFSHKEEAY 524
           S+L                        VED  APS++ +INLKKAKQM+P MF+ K++AY
Sbjct: 470 SRLKDSDDEVDEEDEESKETENESDDEVEDFAAPSDAVRINLKKAKQMIPQMFTDKDDAY 529

Query: 525 VSSDDEEAEERLTKECLFYKAEKETKFFSPAEDESSKEVFSLIKKLNIVPDPKRKGRPPP 584
           VSS DEE EERL K+ L Y+ EK  +FFSPAEDESS+ VF+LIKKLN+VPD + KGR  P
Sbjct: 530 VSS-DEETEERLAKQSLSYRVEKNAQFFSPAEDESSRGVFNLIKKLNVVPDTRIKGR-IP 587

Query: 585 SIFDMPRIGQSINISSKSSFVGRASNHFMPSSKKHGPSKAR-AYIFGRDDSNSRTSLSIS 643
           SIFDMP IGQ+I  SSKSSF+GRASN FMPSS+KHG SK R +YIFGRDDSNSR S+ +S
Sbjct: 588 SIFDMPHIGQNITKSSKSSFIGRASNQFMPSSQKHGSSKVRSSYIFGRDDSNSRPSVLMS 647

Query: 644 EDSSDTIQRESQPPKTASAKFQRNTQNKYTPLDSEPPKSNVSLFEILRKSSLHTERCVQN 703
           EDSSDTI RESQ PK  S KFQRNTQNKY    S+  +SNVSL E+L +SS  T+RCV+N
Sbjct: 648 EDSSDTIIRESQAPKVVSTKFQRNTQNKYATSTSKSQESNVSLMEVLSRSSNRTKRCVKN 707

Query: 704 ARVQQKESTIFDAFKLAKKPI 724
             VQQ ES IF+AFKL KK I
Sbjct: 708 VGVQQNES-IFEAFKLTKKSI 727


>Medtr3g111740.2 | hypothetical protein | HC |
           chr3:52274077-52270989 | 20130731
          Length = 591

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 303/603 (50%), Positives = 367/603 (60%), Gaps = 28/603 (4%)

Query: 1   MEIEGDFDLLPSSPVVHARKLKRLKKATTAPE----YLSPPTFXXXXXXXXXXXXXLNLR 56
           M+ + DF+ LPSSPV+  RKLKRLKKA+   E    + SP  F             +++R
Sbjct: 1   MDSDEDFEALPSSPVIE-RKLKRLKKASRVSENPLPFSSPIKFSGSEQNSGLE---VSIR 56

Query: 57  -SVPEPESLGDGNVA--VEENGLGARRALEFDSVADXXXXXXXXXXXKGEEIGDLNTHES 113
            SVPE ESLG  NV   VEEN LGA+R LEF+S+ D             EE GD NT E 
Sbjct: 57  GSVPEVESLGGENVTDTVEENDLGAKRVLEFESMDDELDARVPEKTI--EESGDKNTVEL 114

Query: 114 EKKRPSSDVVSENXXXXXXXXXRID--------DGGDGSEKNPKEATSSKRKTEKERREN 165
           E K+PS + VSE            +        D  +GSEK  KE+ S+KRK EKERREN
Sbjct: 115 EIKQPSVEEVSEKKEEISEKKGNKNKKSKKKGSDDDNGSEKKLKESISNKRKAEKERREN 174

Query: 166 LKHLRAESQRLLRESRDASFKPIPLVQKPISSVLDKIRKRKSEIMKKFSASFXXXXXXXX 225
           LK LRAESQRLLRE+RDA+FKP+PLVQKPISS+LDKIRKRK E +KK + SF        
Sbjct: 175 LKQLRAESQRLLRETRDAAFKPVPLVQKPISSILDKIRKRKLEFLKKSNVSFHDNDGFHV 234

Query: 226 XXXXSERPLLREDIPEKVENSDQEETLASCPVGANDDLNTSHSGGSDEAADSPIPKSTPS 285
                 RP   E+I  K+EN++ EET A+ P  A +DL+T H  GS +AAD    +S PS
Sbjct: 235 DIDSDPRP--SEEITNKIENAESEETPATRP--AENDLSTLHIDGSTDAADHSSRESIPS 290

Query: 286 PVAMASESERAFRAPIDDTQELFSDSQISDTKEETVNEKLDNTPEQVFAPSMLSMNLELD 345
           P+ + SE+  AFRAP+DDTQ+LFSDS+I+D KEE +N KL+   E+VFAPSMLSMNL+LD
Sbjct: 291 PMDVVSETIHAFRAPVDDTQDLFSDSEINDIKEEALNGKLNKPSEEVFAPSMLSMNLKLD 350

Query: 346 SAPPXXXXXXXXXXXXXXXXAPPLRGSVGLNSPPSGDPVRAFVXXXXXXXXXXXXXLQCX 405
           SAP                  P L GS  L+ P SGDPV+AFV             LQ  
Sbjct: 351 SAPVDDDMSSDDEDNDKENTVPHLHGSADLSLPASGDPVKAFVDEEAEEEDDSDNDLQ-R 409

Query: 406 XXXXXXXXXXXXXXXXNAMIATQFEEKPVDREKRDQLHQQWLEQQDMAGMDNLLQKLNCG 465
                           N MIAT +EE P+DREKRDQLHQQWLEQQD  GMDNLLQKLNCG
Sbjct: 410 FQDNEEGDNDDDIEELNDMIATGYEEAPIDREKRDQLHQQWLEQQDTTGMDNLLQKLNCG 469

Query: 466 SKLXXXXXXXXXXXXXXXXXXXXX-XXVEDHIAPSESAKINLKKAKQMLPHMFSHKEEAY 524
           S+L                        VED  APS++ +INLKKAKQM+P MF+ K++AY
Sbjct: 470 SRLKDSDDEVDEEDEESKETENESDDEVEDFAAPSDAVRINLKKAKQMIPQMFTDKDDAY 529

Query: 525 VSSDDEEAEERLTKECLFYKAEKETKFFSPAEDESSKEVFSLIKKLNIVPDPKRKGRPPP 584
           VSS DEE EERL K+ L Y+ EK  +FFSPAEDESS+ VF+LIKKLN+VPD + KGR P 
Sbjct: 530 VSS-DEETEERLAKQSLSYRVEKNAQFFSPAEDESSRGVFNLIKKLNVVPDTRIKGRIPC 588

Query: 585 SIF 587
            I+
Sbjct: 589 KIY 591