Miyakogusa Predicted Gene

Lj5g3v2297880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2297880.1 tr|A9SWQ1|A9SWQ1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_231423,27.84,0.000000000000003,seg,NULL;
coiled-coil,NULL,CUFF.57255.1
         (724 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75150.1 | Symbols:  | unknown protein; Has 38228 Blast hits ...   194   3e-49

>AT1G75150.1 | Symbols:  | unknown protein; Has 38228 Blast hits to
           24529 proteins in 1168 species: Archae - 169; Bacteria -
           4103; Metazoa - 14594; Fungi - 5866; Plants - 1861;
           Viruses - 317; Other Eukaryotes - 11318 (source: NCBI
           BLink). | chr1:28204709-28208512 REVERSE LENGTH=784
          Length = 784

 Score =  194 bits (492), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 304/616 (49%), Gaps = 92/616 (14%)

Query: 151 ATSSKRKTEKERRENLKHLRAESQRLLRESRDASFKPIPLVQKPISSVLDKIRKRKSEIM 210
           +T+S   T+KERRE L  LRAE+QRLLRE+RDA+F+  PLV+KPISSVL+KIR+RK EI 
Sbjct: 205 STASMNMTKKERREYLDQLRAENQRLLRETRDAAFEAAPLVRKPISSVLEKIRRRKEEIS 264

Query: 211 KKFSASFXXXXXXXXXXXXSERPLLREDIPEKVENSDQEETLASCPVGANDDLNTS---H 267
           K+F                S +     DI    +  D E+ +A      N+D+N +   +
Sbjct: 265 KQF---------------LSRKKSKSIDI---CDRDDFEDVVAE---EMNEDMNLTSKQN 303

Query: 268 SGGSDEAADSPIP-KSTPSPVAMASESERAFRAPIDDTQELFSDSQISDTKEETVNEKLD 326
           S G   + DS  P +++ SP    +ES    + P    Q +       ++ +E + +   
Sbjct: 304 SAGQHCSEDSAGPSENSDSPSKREAESNPTHQDPSVCPQTI-------NSGDELLEKMSS 356

Query: 327 NTPEQVFAPSMLSMNLELDSAPPXXXXXXXXXXXXXXXXAPPLRGSVGLNSPPS-----G 381
            + E+V  PS+++MNL+L+ +P                 A  ++G    NS P      G
Sbjct: 357 RSLEEVMTPSVVAMNLKLNLSP---------VPDKSSEEAEYIKG----NSDPEIHDSPG 403

Query: 382 DPVRAFVXXXXXXXXXXXXXLQCXXXXXXXXXXXXXXXXXNAMIATQFEEKPVDREKRDQ 441
           DPVR F+             L                     MI +QF+E P D+++R++
Sbjct: 404 DPVRKFIDEDAEEEDDSDNDL--LRFEDEDDDEDEDDDDLRDMIVSQFKEDPTDKDRRNE 461

Query: 442 LHQQWLEQQDMAGMDNLLQKLNCGSK-----LXXXXXXXXXXXXXXXXXXXXXXXVEDHI 496
           LHQ+WLEQQD AG + LLQKL  G +     L                       V+   
Sbjct: 462 LHQKWLEQQDAAGTEKLLQKLKRGVQHDETLLSEDEDDDVDDDDEERPEGADGEEVQKPE 521

Query: 497 A------------PSE--SAKINLKKAKQMLPHMFSHKEEAYVSSDDEEAEERLTKECLF 542
           A            PS   S ++ +KK K+M+P MF+ +++ YVSSDDEE E++L ++ L+
Sbjct: 522 ANEDEDEDEDEEDPSHANSMRMTIKKIKEMIPLMFTDEDDVYVSSDDEEMEKKLLQQRLY 581

Query: 543 YKAEKETKFFSPAEDESSKEVFSLIKKLNIVPDPKRKGRPPPSIFDMPRIGQSIN---IS 599
            K E + K  S   DE+S+E+      L  +  P+ K +  PS F   R    IN    +
Sbjct: 582 KKMELKAKSSSSTADENSEEI------LRHIKKPEIKKKAKPSSFK-ERALMEINKNPAA 634

Query: 600 SKSSFVGRAS-NHFMPSSKKHGPSKARAYIFGRDDSNSRTSLSISEDSS--DTIQRESQP 656
           SKSSF+GR + +     S+K G +  R YIF RDDSNS++S S++E+ S  +TI +E   
Sbjct: 635 SKSSFLGRLTKSSISEGSRKRGSNVVRGYIFERDDSNSKSSNSVAEEPSVPETIIQEKSR 694

Query: 657 PKTASAKF------QRNTQNKYTPLDSEP-PKSNVSLFEILRKSSLHTERCVQNARVQQK 709
           PK A AKF      +R+T  + T ++ E   +   +L+EIL+ SS  T    +   +   
Sbjct: 695 PKRAPAKFTASQSQERSTTLQATVVEKETSTRQRSTLYEILKMSSKKTSFNSRETMISSN 754

Query: 710 ES-TIFDAFKLAKKPI 724
            + +IF AFKL KKP+
Sbjct: 755 HTESIFAAFKLDKKPV 770