Miyakogusa Predicted Gene

Lj5g3v2205000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2205000.1 Non Chatacterized Hit- tr|Q8VWV9|Q8VWV9_PINPS
Putative alpha-xylosidase OS=Pinus pinaster GN=XYL1
PE,44.64,2e-18,ALPHA-GLUCOSIDASE,NULL; ALPHA-GLUCOSIDASE,Glycoside
hydrolase, family 31,CUFF.56925.1
         (134 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 |...   152   8e-38
AT3G45940.1 | Symbols:  | Glycosyl hydrolases family 31  protein...   110   2e-25

>AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 |
           chr1:25734435-25737897 REVERSE LENGTH=915
          Length = 915

 Score =  152 bits (383), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 104/133 (78%), Gaps = 3/133 (2%)

Query: 2   QQGGVTTKNARMTPFSLIVTFPADAAEGEAKGNLFLDDDELPEMKIGNGFSSYIDFHATV 61
           QQGG+ +K+AR TPFSL++ FPA A+EG A G L+LD+DELPEMK+GNG S+Y+DF+A+V
Sbjct: 758 QQGGLISKDARTTPFSLVIAFPAGASEGYATGKLYLDEDELPEMKLGNGQSTYVDFYASV 817

Query: 62  KEGSVKVWSEVQDGKFALDKGWVIESINVLGLNGRSGTLATIEIDGKPPKGVSDVKVSAS 121
             G++K+WS+V++GKFAL KGWVIE ++VLGL G +G ++ I+I+G P      ++VS+ 
Sbjct: 818 GNGTMKMWSQVKEGKFALSKGWVIEKVSVLGLRG-AGQVSEIQINGSP--MTKKIEVSSK 874

Query: 122 QHKYLYGQGDGEK 134
           +H Y+ G  D E+
Sbjct: 875 EHTYVIGLEDEEE 887


>AT3G45940.1 | Symbols:  | Glycosyl hydrolases family 31  protein |
           chr3:16886226-16889171 REVERSE LENGTH=868
          Length = 868

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 82/120 (68%), Gaps = 2/120 (1%)

Query: 13  MTPFSLIVTFPADAAEGEAKGNLFLDDDELPEMKIGNGFSSYIDFHATVKEGSVKVWSEV 72
           + P   +V FPA A+EG A G LFLDDDELPEMK+GNG S+YIDF+A+V   SVK+WS+V
Sbjct: 706 ILPMQQVVAFPAGASEGYASGKLFLDDDELPEMKLGNGKSTYIDFYASVGNESVKIWSQV 765

Query: 73  QDGKFALDKGWVIESINVLGLNGRSGTLATIEIDGKPPKG-VSDVKVSASQHKYLYGQGD 131
           ++G+FAL +G VIE + VLGL G +  ++ I ++G         ++VS+ +  Y+ G  D
Sbjct: 766 KEGQFALSQGLVIEKVIVLGLKG-TWKVSEILLNGSSISNETKTIEVSSKEQMYVVGSED 824