Miyakogusa Predicted Gene
- Lj5g3v2099530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2099530.1 tr|G7IEW2|G7IEW2_MEDTR Xylosidase OS=Medicago
truncatula GN=MTR_1g106860 PE=4 SV=1,85.75,0,PERIPLASMIC
BETA-GLUCOSIDASE-RELATED,NULL; PERIPLASMIC
BETA-GLUCOSIDASE-RELATED,Glycoside hydrolase ,CUFF.56642.1
(2385 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP041585 similar to UniRef100_Q9LJN4 Cluster: Beta-1,4-... 997 0.0
gnl|LJGI|BP028363 similar to UniRef100_Q9LJN4 Cluster: Beta-1 4-... 650 0.0
gnl|LJGI|BW623877 similar to UniRef100_Q9LJN4 Cluster: Beta-1,4-... 365 e-100
gnl|LJGI|AV415013 similar to UniRef100_A7QL64 Cluster: Chromosom... 305 7e-82
>gnl|LJGI|BP041585 similar to UniRef100_Q9LJN4 Cluster: Beta-1,4-xylosidase; n=2;
Arabidopsis thaliana|Rep: Beta-1,4-xylosidase -
Arabidopsis thaliana (Mouse-ear cress), partial (18%)
Length = 503
Score = 997 bits (503), Expect = 0.0
Identities = 503/503 (100%)
Strand = Plus / Plus
Query: 241 ccttcttatgaatggtggtcggaggcgcttcacggtgtctccaatttaggaccggggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttcttatgaatggtggtcggaggcgcttcacggtgtctccaatttaggaccggggaca 60
Query: 301 cgttttaacagaacagtgcccggcgccactagcttcccagcagtgattctatcagctgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgttttaacagaacagtgcccggcgccactagcttcccagcagtgattctatcagctgca 120
Query: 361 agcttcaatgcaactctatggtacaatatgggacaggttgtgtcaactgaggcaagagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcttcaatgcaactctatggtacaatatgggacaggttgtgtcaactgaggcaagagct 180
Query: 421 atgtacaatgtggacttggctggtttaacattttggagtcctaatgtgaatgtgttccgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtacaatgtggacttggctggtttaacattttggagtcctaatgtgaatgtgttccgc 240
Query: 481 gacccgagatgggggcgtggccaggaaactccaggggaggatccattggtggtgtctaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacccgagatgggggcgtggccaggaaactccaggggaggatccattggtggtgtctaga 300
Query: 541 tatgctgtgaagtatgttcgtgggttacaagatgtggaagatgaagaaagtattaaagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgctgtgaagtatgttcgtgggttacaagatgtggaagatgaagaaagtattaaagct 360
Query: 601 gataggcttaaggtttcaagctgttgtaagcattacactgcttatgatgttgataactgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gataggcttaaggtttcaagctgttgtaagcattacactgcttatgatgttgataactgg 420
Query: 661 aaaggcgttgatcgcttccattttgatgcaaaggtgaccaagcaagacttggaggatact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaggcgttgatcgcttccattttgatgcaaaggtgaccaagcaagacttggaggatact 480
Query: 721 tatcagcctccatttaagagctg 743
|||||||||||||||||||||||
Sbjct: 481 tatcagcctccatttaagagctg 503
>gnl|LJGI|BP028363 similar to UniRef100_Q9LJN4 Cluster: Beta-1 4-xylosidase; n=2;
Arabidopsis thaliana|Rep: Beta-1 4-xylosidase -
Arabidopsis, partial (2%)
Length = 488
Score = 650 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Minus
Query: 2054 tgaagaacactggaccatttaatggttcccatgtggtgttggtgttctgggagccaccaa 2113
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgaagaacactggaccatataatggttcccatgtggtgttggtgttctgggagccaccaa 429
Query: 2114 cttcagagttggtgactggggctccaattaagcaattaataggatttgaaagagcacatg 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cttcagagttggtgactggggctccaattaagcaattaataggatttgaaagagcacatg 369
Query: 2174 ttatggtggggatgacagagtttgtgacattggaaatagatatatgccaattgctaagta 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttatggtggggatgacagagtttgtgacattggaaatagatatatgccaattgctaagta 309
Query: 2234 atgtggatagtgatgggaaaagaaagctgatcattggaaagcacacccttttggttggct 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atgtggatagtgatgggaaaagaaagctgatcattggaaagcacacccttttggttggct 249
Query: 2294 cttccagtgagacacaggttaggcaccaaattgatattagtctttcagggaatgggatgg 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cttccagtgagacacaggttaggcaccaaattgatattagtctttcagggaatgggatgg 189
Query: 2354 agaagaagtcatatctggatgaatctatataa 2385
||||||||||||||||||||||||||||||||
Sbjct: 188 agaagaagtcatatctggatgaatctatataa 157
>gnl|LJGI|BW623877 similar to UniRef100_Q9LJN4 Cluster: Beta-1,4-xylosidase; n=2;
Arabidopsis thaliana|Rep: Beta-1,4-xylosidase -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 541
Score = 365 bits (184), Expect = e-100
Identities = 193/196 (98%)
Strand = Plus / Plus
Query: 863 gatatattgtttcagattgtgattcagtgcaagtatattacgagtcaattcattacactg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatatattgtttcagattgtgattcagtgcaagtatattacgagtcaattcattacactg 405
Query: 923 caactcctgaagatgcagtggctcttgcactgaaagcaggtttaaacatgaactgtggag 982
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 406 caactcctgaagatgcagtagctcttgcactgaaagcatgtttaaacatgaactgtggag 465
Query: 983 actatctaagaaaatacactgcaaatgcagtgaagttgaaaaaagtagatgtatctacag 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 actatctaagaaaatacactgcaaatgcagtgaagttgaaaaaagtagatgtatctacag 525
Query: 1043 tagaccaggccttggt 1058
|||||||||| |||||
Sbjct: 526 tagaccaggctttggt 541
>gnl|LJGI|AV415013 similar to UniRef100_A7QL64 Cluster: Chromosome chr3 scaffold_117,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_117, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 154
Score = 305 bits (154), Expect = 7e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1587 cataatggcagctggtccaattgacatttctttcactaaaagtatcagaaacattggggg 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cataatggcagctggtccaattgacatttctttcactaaaagtatcagaaacattggggg 60
Query: 1647 gatactgtgggtagggtatcctggtcaagctggtggggatgccatagcccaagtgatatt 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatactgtgggtagggtatcctggtcaagctggtggggatgccatagcccaagtgatatt 120
Query: 1707 tggagaatacaacccaggtggaaggtcccctttt 1740
||||||||||||||||||||||||||||||||||
Sbjct: 121 tggagaatacaacccaggtggaaggtcccctttt 154