Miyakogusa Predicted Gene

Lj5g3v2013860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2013860.1 CUFF.56517.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g29730.1                                                       191   3e-49
Glyma10g38090.1                                                       189   1e-48
Glyma07g07960.1                                                        55   3e-08
Glyma03g01540.1                                                        52   2e-07
Glyma18g46480.1                                                        50   1e-06

>Glyma20g29730.1 
          Length = 309

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 116/166 (69%), Gaps = 4/166 (2%)

Query: 1   MVQWESARVEAEARLSMESSLLNPCSAGKTCPDHILQLWHSEVGQSFRMLKGKEGLVCEI 60
           MVQWES RVE EARLS+ES++LN     KTCPDH LQLWHSEVG+SFRM+KGKE  V   
Sbjct: 147 MVQWESVRVETEARLSLESTMLNSWPTSKTCPDHFLQLWHSEVGKSFRMIKGKEEGV--- 203

Query: 61  LVXXXXXXXXXXXXXXXXXXXXLQGKS-TGTSSHIAKLEDVNMIQEQASSYKPKLEDDKA 119
           +                     LQ K+ TGTSS I KLEDV+M+ EQ SSYKPKL+DD A
Sbjct: 204 VSQSLISQPSSSSKLESCSDVSLQVKTNTGTSSCIPKLEDVSMVHEQTSSYKPKLDDDTA 263

Query: 120 VLESGNYEFLDTSDSALKHLLDIPDGDIGFLGQTDNFLNLLDGRFD 165
             +SGNYEFLDTSDSALKHLL +PD D+GFLG  D+F NLLDG  D
Sbjct: 264 GSDSGNYEFLDTSDSALKHLLHMPDSDMGFLGHNDHFQNLLDGTCD 309


>Glyma10g38090.1 
          Length = 309

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 116/166 (69%), Gaps = 4/166 (2%)

Query: 1   MVQWESARVEAEARLSMESSLLNPCSAGKTCPDHILQLWHSEVGQSFRMLKGKEGLVCEI 60
           MVQWES RVEAEARLSMES++LN     KTCPDH LQLW+SEVG+SFRM+KGKE  V   
Sbjct: 147 MVQWESVRVEAEARLSMESTMLNSWPTSKTCPDHFLQLWNSEVGKSFRMIKGKEEGV--- 203

Query: 61  LVXXXXXXXXXXXXXXXXXXXXLQGKS-TGTSSHIAKLEDVNMIQEQASSYKPKLEDDKA 119
           +                     LQ K+ TG SS I KLEDV+M+ EQ SSYKPKL+DD A
Sbjct: 204 VSQSLVSQPSSSSKLESCSDVSLQVKNNTGNSSCIPKLEDVSMVHEQTSSYKPKLDDDTA 263

Query: 120 VLESGNYEFLDTSDSALKHLLDIPDGDIGFLGQTDNFLNLLDGRFD 165
             +SGNYEFLDTSDS LKHLL +PD D+GFLGQ D+F NLLDG  D
Sbjct: 264 GSDSGNYEFLDTSDSTLKHLLHMPDSDMGFLGQNDHFQNLLDGTCD 309


>Glyma07g07960.1 
          Length = 273

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 6/60 (10%)

Query: 1   MVQWESARVEAEARLSMESSLLNPCSAGKTCPDHILQLWHSEVGQSFR-MLKGKEGLVCE 59
           M QWE+AR+EAEARLS E    N     KT  D+ L++W+SEVG+SFR + K +  + CE
Sbjct: 150 MAQWETARLEAEARLSREPHFNN-----KTDSDYFLRIWNSEVGESFRDVHKSESSIKCE 204


>Glyma03g01540.1 
          Length = 272

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)

Query: 1   MVQWESARVEAEARLSMESSLLNPCSAGKTCPDHILQLWHSEVGQSFR-MLKGKEGLVCE 59
           M QWESAR+EAEARLS E  L    +  KT  D+ L++W+S++G+SFR + K +  + CE
Sbjct: 151 MAQWESARLEAEARLSREPHLY--YNNNKTDSDYFLRIWNSDLGESFRDVHKLESSIKCE 208


>Glyma18g46480.1 
          Length = 316

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 8/56 (14%)

Query: 1   MVQWESARVEAEARLSMESSLLN--------PCSAGKTCPDHILQLWHSEVGQSFR 48
           M QWESAR+EAEARLS ESS  +          +   T  D+ L++W+SEVG++FR
Sbjct: 149 MAQWESARLEAEARLSNESSRFSHNTTNNSNSDNNKTTDSDYFLRIWNSEVGEAFR 204