Miyakogusa Predicted Gene

Lj5g3v1988760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1988760.1 Non Characterized Hit- tr|G7IEM7|G7IEM7_MEDTR
Membrane protein, putative OS=Medicago truncatula
GN=M,79.79,0,seg,NULL; DUF819,Protein of unknown function
DUF819,CUFF.56304.1
         (444 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100120.1 | transmembrane protein | HC | chr1:45104389-451...   514   e-146
Medtr6g048050.1 | integral membrane protein, putative | HC | chr...   411   e-115
Medtr1g100120.2 | transmembrane protein | HC | chr1:45104389-451...   376   e-104
Medtr0054s0050.1 | transmembrane protein | HC | scaffold0054:135...    99   8e-21
Medtr7g060910.1 | transmembrane protein, putative | LC | chr7:22...    78   1e-14

>Medtr1g100120.1 | transmembrane protein | HC |
           chr1:45104389-45107366 | 20130731
          Length = 447

 Score =  514 bits (1323), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 271/375 (72%), Positives = 303/375 (80%), Gaps = 1/375 (0%)

Query: 70  ISPQDQWGNWTALFATAAFGIWSEKNTKIGKIVSGSMVCILVGLAASNFGILAVEAPAYG 129
           ISP D+WGNWTALFA AAFGIWSEK T+IGK VSG++V ILV LAASN GIL+V APAY 
Sbjct: 74  ISPNDEWGNWTALFAAAAFGIWSEK-TEIGKTVSGAIVSILVCLAASNLGILSVNAPAYD 132

Query: 130 VVMQFXXXXXXXXXXFTADLRRVIKTTGALLIPFLLGAVATTVGTLVAYLLVPMRSLGQD 189
           +V++F          F ADLRRVI +TG LL+PFLLG+VATTVGT+VAYLLVPMRSLGQD
Sbjct: 133 LVLKFLLPLAIPLLLFRADLRRVISSTGTLLLPFLLGSVATTVGTVVAYLLVPMRSLGQD 192

Query: 190 SWKIAAALMGRHIGGAVNYVAISDALGVSPSVLSAPLAADNVINVLYFSTLFALASKVPP 249
           SWKIAAALMGRHIGGAVNYVAISDALGV PS+L+A LAADNVI  +YFSTLF LASKVPP
Sbjct: 193 SWKIAAALMGRHIGGAVNYVAISDALGVPPSILAAGLAADNVICAVYFSTLFLLASKVPP 252

Query: 250 EASASVNDVGMSTMLGSGDKLPMLQMATSLAVSFAICKASTFLTRYFRIQGGVLPXXXXX 309
           E+SASVND  M+TM GSGDKLP+LQMATSLAVSFA+CK +  LT +F IQGG LP     
Sbjct: 253 ESSASVNDDTMTTMSGSGDKLPVLQMATSLAVSFAMCKVANILTGHFGIQGGNLPLVTAI 312

Query: 310 XXXXXXXXPKLFASLAPSGQAMAIILIQVFFAVIGATGNIWNVMNTAPSIFLFSFVQLVI 369
                   PK FASLAPSG+AMA+ILIQVFF VIGA+G+I +VM+TAPSIFLFSFVQ+ I
Sbjct: 313 AVIFATVFPKPFASLAPSGEAMAVILIQVFFGVIGASGSIRSVMDTAPSIFLFSFVQITI 372

Query: 370 HLAVIXXXXXXXXXXXXXXXIASNANVGGPTTASGMATAKGWHSLIVPGILAGIFGSAIA 429
           HLA+I               IASNANVGGPTTA GMATAKGW SLI+PGILAGIFG AIA
Sbjct: 373 HLALILGLGRLVRFDLKLLLIASNANVGGPTTACGMATAKGWKSLILPGILAGIFGIAIA 432

Query: 430 TFLGIGFGLTVLKHM 444
           TFLGIGFG+ VLK+M
Sbjct: 433 TFLGIGFGVKVLKYM 447


>Medtr6g048050.1 | integral membrane protein, putative | HC |
           chr6:17329311-17323907 | 20130731
          Length = 452

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/375 (56%), Positives = 271/375 (72%), Gaps = 2/375 (0%)

Query: 70  ISPQDQWGNWTALFATAAFGIWSEKNTKIGKIVSGSMVCILVGLAASNFGILAVEAPAYG 129
           IS  D WG W+A+F+  AFGIWSEK TKIG +VS ++V  LVGLAASN GIL  +APAY 
Sbjct: 80  ISSDDHWGVWSAIFSIGAFGIWSEK-TKIGSMVSAALVSTLVGLAASNLGILPHDAPAYS 138

Query: 130 VVMQFXXXXXXXXXXFTADLRRVIKTTGALLIPFLLGAVATTVGTLVAYLLVPMRSLGQD 189
           +V++F          F A+L++V+++TG LL+ FLLG+VAT +GTLVA+LLVPMRSLG D
Sbjct: 139 IVLEFLLPLTIPLLLFGANLQQVVRSTGMLLVAFLLGSVATVIGTLVAFLLVPMRSLGPD 198

Query: 190 SWKIAAALMGRHIGGAVNYVAISDALGVSPSVLSAPLAADNVINVLYFSTLFALASKVPP 249
           +WKIAAALMG +IGG+VNYVAIS+ALG+S SVL+A +AADNVI  LYF  LFALASK+P 
Sbjct: 199 NWKIAAALMGSYIGGSVNYVAISEALGLSASVLAAGVAADNVITALYFMVLFALASKIPA 258

Query: 250 EASASVNDVGMSTMLGSGDKLPMLQMATSLAVSFAICKASTFLTRYFRIQGGVLPXXXXX 309
           E +    D  M  M     ++P+LQ AT++A SF IC+A+T+ T+ + IQGG LP     
Sbjct: 259 ETAPPTTDKEMH-MKFENQEMPVLQTATAVATSFLICRAATYFTKLYGIQGGTLPGVTAI 317

Query: 310 XXXXXXXXPKLFASLAPSGQAMAIILIQVFFAVIGATGNIWNVMNTAPSIFLFSFVQLVI 369
                   PKL + L P+G  +A++L+QVFF V+GA+G+I NV+ TAPSIF+F+ VQ+ I
Sbjct: 318 IVVLATLAPKLISPLIPAGHTVALVLMQVFFVVVGASGSILNVIQTAPSIFMFALVQVTI 377

Query: 370 HLAVIXXXXXXXXXXXXXXXIASNANVGGPTTASGMATAKGWHSLIVPGILAGIFGSAIA 429
           H+ ++               +ASNAN+GGPTTA GMA AKGW SL+VPGIL GIFG +IA
Sbjct: 378 HILIVLGLGKLFKLDLKLLLLASNANIGGPTTACGMAKAKGWESLVVPGILTGIFGVSIA 437

Query: 430 TFLGIGFGLTVLKHM 444
           TFLGIGFGL VLKH+
Sbjct: 438 TFLGIGFGLMVLKHL 452


>Medtr1g100120.2 | transmembrane protein | HC |
           chr1:45104389-45107366 | 20130731
          Length = 352

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/269 (72%), Positives = 219/269 (81%), Gaps = 1/269 (0%)

Query: 70  ISPQDQWGNWTALFATAAFGIWSEKNTKIGKIVSGSMVCILVGLAASNFGILAVEAPAYG 129
           ISP D+WGNWTALFA AAFGIWSEK T+IGK VSG++V ILV LAASN GIL+V APAY 
Sbjct: 74  ISPNDEWGNWTALFAAAAFGIWSEK-TEIGKTVSGAIVSILVCLAASNLGILSVNAPAYD 132

Query: 130 VVMQFXXXXXXXXXXFTADLRRVIKTTGALLIPFLLGAVATTVGTLVAYLLVPMRSLGQD 189
           +V++F          F ADLRRVI +TG LL+PFLLG+VATTVGT+VAYLLVPMRSLGQD
Sbjct: 133 LVLKFLLPLAIPLLLFRADLRRVISSTGTLLLPFLLGSVATTVGTVVAYLLVPMRSLGQD 192

Query: 190 SWKIAAALMGRHIGGAVNYVAISDALGVSPSVLSAPLAADNVINVLYFSTLFALASKVPP 249
           SWKIAAALMGRHIGGAVNYVAISDALGV PS+L+A LAADNVI  +YFSTLF LASKVPP
Sbjct: 193 SWKIAAALMGRHIGGAVNYVAISDALGVPPSILAAGLAADNVICAVYFSTLFLLASKVPP 252

Query: 250 EASASVNDVGMSTMLGSGDKLPMLQMATSLAVSFAICKASTFLTRYFRIQGGVLPXXXXX 309
           E+SASVND  M+TM GSGDKLP+LQMATSLAVSFA+CK +  LT +F IQGG LP     
Sbjct: 253 ESSASVNDDTMTTMSGSGDKLPVLQMATSLAVSFAMCKVANILTGHFGIQGGNLPLVTAI 312

Query: 310 XXXXXXXXPKLFASLAPSGQAMAIILIQV 338
                   PK FASLAPSG+AMA+ILIQV
Sbjct: 313 AVIFATVFPKPFASLAPSGEAMAVILIQV 341


>Medtr0054s0050.1 | transmembrane protein | HC |
           scaffold0054:13581-14463 | 20130731
          Length = 132

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 12/107 (11%)

Query: 338 VFFAVIGATGNIWNVMNTAPSIFLFSFVQLVIHLAVIXXXXXXXXXXXXXXXIASNANVG 397
           +FF V+GA+G+I NV+ TAPS+F+F+ VQ+ IHL ++               +ASNA   
Sbjct: 38  IFFVVVGASGSILNVIQTAPSMFMFALVQVTIHLLIVLGLGKLFKLDLKLLLLASNAK-- 95

Query: 398 GPTTASGMATAKGWHSLIVPGILAGIFGSAIATFLGIGFGLTVLKHM 444
                      KGW SL+VPG+L GIFG +IATFLGIGFGL VLKH+
Sbjct: 96  ----------PKGWESLVVPGMLTGIFGVSIATFLGIGFGLMVLKHL 132


>Medtr7g060910.1 | transmembrane protein, putative | LC |
           chr7:22012290-22014547 | 20130731
          Length = 201

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 12/95 (12%)

Query: 338 VFFAVIGATGNIWNVMNTAPSIFLFSFVQLVIHLAVIXXXXXXXXXXXXXXXIASNANVG 397
           +FF V+GA+G+I NV+ TAPS+F+F+ VQ+ IHL ++               +ASNA   
Sbjct: 32  IFFVVVGASGSILNVIQTAPSMFMFALVQVTIHLLIVLGLGKLFKLDLKLLLLASNAK-- 89

Query: 398 GPTTASGMATAKGWHSLIVPGILAGIFGSAIATFL 432
                      KGW SL+VPG+L GIFG +IATFL
Sbjct: 90  ----------PKGWESLVVPGMLTGIFGVSIATFL 114