Miyakogusa Predicted Gene

Lj5g3v1972330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1972330.1 Non Characterized Hit- tr|D8TKB2|D8TKB2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,31.56,9e-19,Abi,CAAX amino terminal protease; YHET-RELATED,NULL;
ABHYDROLASE DOMAIN-CONTAINING PROTEIN,NULL,CUFF.56287.1
         (325 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g099420.1 | CAAX amino terminal protease family protein | ...   526   e-149
Medtr8g099085.1 | CAAX amino terminal protease family protein | ...   382   e-106
Medtr8g467540.2 | CAAX amino terminal protease family protein | ...    86   3e-17
Medtr8g467540.1 | CAAX amino terminal protease family protein | ...    86   3e-17
Medtr8g467540.3 | CAAX amino terminal protease family protein | ...    70   3e-12
Medtr0096s0020.1 | CAAX protease self-immunity protein | HC | sc...    49   6e-06

>Medtr1g099420.1 | CAAX amino terminal protease family protein | HC
           | chr1:44897057-44901183 | 20130731
          Length = 342

 Score =  526 bits (1354), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/330 (80%), Positives = 286/330 (86%), Gaps = 6/330 (1%)

Query: 2   STTITSLPP-SLPLRHNS---RVSLCSP-LSSHISFQSFTFSTKRWRILCFRHENTPSEA 56
           +TTI+S PP SLP+RHNS   RVSL +P +SS    QSFT ST +WR+LCF+H N PSE+
Sbjct: 3   TTTISSSPPFSLPIRHNSSSSRVSLFNPTISSPFPLQSFTLSTNKWRVLCFKHRNNPSES 62

Query: 57  NGFEFEEDKLSEDLVKPKGDQSKDLKN-DWLAALDMVKTSFLGGEPWTVPWTAKTIVQVM 115
              EF+EDKLS+D VK KGD+ KDLK  DWL AL  +  + L  EPW VPWTAKTIVQVM
Sbjct: 63  TDSEFKEDKLSQDSVKFKGDEPKDLKKKDWLTALHTIIHTVLSVEPWKVPWTAKTIVQVM 122

Query: 116 LLWIASFWLVGSWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEGVVGIAILRRCLASF 175
           LLWI SFWLVGSWIVPFLAYTAG RKETLSYRGQALYSLLTDVAEG+VGIAIL RCL  F
Sbjct: 123 LLWICSFWLVGSWIVPFLAYTAGIRKETLSYRGQALYSLLTDVAEGMVGIAILHRCLEKF 182

Query: 176 QPLPPNWFKFELKGNWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVTVSSVEQSIVA 235
           +PL  +WFKFELKG WQFDVGLGCLMFPLIN LSQMNLNL PVLQY PVTVSSVEQSIVA
Sbjct: 183 KPLSSDWFKFELKGKWQFDVGLGCLMFPLINHLSQMNLNLWPVLQYAPVTVSSVEQSIVA 242

Query: 236 RDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSVAFALAHFNIQRM 295
           RDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSA+LVSSVAFA AHFNIQRM
Sbjct: 243 RDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAVLVSSVAFAFAHFNIQRM 302

Query: 296 IPLIFLGIVMGAVFVRSRNLLPSMLLHSLW 325
           +PL+FLG+VMGAVFVRSRNLLPSMLLHSLW
Sbjct: 303 LPLVFLGMVMGAVFVRSRNLLPSMLLHSLW 332


>Medtr8g099085.1 | CAAX amino terminal protease family protein | HC
           | chr8:41607888-41603432 | 20130731
          Length = 343

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/319 (59%), Positives = 235/319 (73%), Gaps = 6/319 (1%)

Query: 13  PLRHNSRVSLCSPL---SSHISFQSFTFSTKRWRILCFRHE-NTPSEANGFEFEEDKLSE 68
           P++  SR     P    S  I    F  S  +  ILCFRHE +  SE    +F +    E
Sbjct: 15  PIKPFSRPPTLRPFPTTSFRIPNSRFNPSNNKLSILCFRHEEDNSSETPKPDFIDHCFHE 74

Query: 69  DLVKPKGDQSKDLKNDWLAALDMVKTSFLGG--EPWTVPWTAKTIVQVMLLWIASFWLVG 126
           +LV+ +      +K DW + +         G    W VPW+A TI++VMLLW ++FW +G
Sbjct: 75  ELVQSESRDPNVVKRDWKSIVPKAANEVFNGIGYRWVVPWSATTILKVMLLWTSAFWFIG 134

Query: 127 SWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEGVVGIAILRRCLASFQPLPPNWFKFE 186
           SW++PF A+  GF K++L++RGQAL+SL+TDV EG+ GIAIL RCL+ F+PLPP+WFKF 
Sbjct: 135 SWMIPFAAHITGFSKDSLTFRGQALFSLVTDVTEGLAGIAILVRCLSRFRPLPPDWFKFS 194

Query: 187 LKGNWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVTVSSVEQSIVARDPVAMALYAV 246
            +G W FDV +GCLMFPL+N+LSQ NL+LLP+L  T VT+SSVEQSI ARDPVAM LYA+
Sbjct: 195 PEGKWHFDVVMGCLMFPLVNRLSQFNLDLLPILPSTQVTLSSVEQSIKARDPVAMLLYAI 254

Query: 247 VVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSVAFALAHFNIQRMIPLIFLGIVMG 306
           VVSVCAP+WEEIVFRGFLLPSLT+YMPVW AILVSSVAFALAHFNIQRM+PLIFLG+VMG
Sbjct: 255 VVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSVAFALAHFNIQRMLPLIFLGMVMG 314

Query: 307 AVFVRSRNLLPSMLLHSLW 325
            +F RSRNLLPSMLLHSLW
Sbjct: 315 VIFTRSRNLLPSMLLHSLW 333


>Medtr8g467540.2 | CAAX amino terminal protease family protein | HC
           | chr8:24295728-24287936 | 20130731
          Length = 338

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 102 WTVPWTAKTIVQVMLLWIASFWLVGSWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEG 161
           W VPW  +T+    L     F L G      L Y  G R + LS   +A    +      
Sbjct: 85  WEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYL-GIRPDMLSLDEKAELLFIDQGITT 143

Query: 162 VVGIAILRRCLASFQPLPPNWFKFELK------GNWQFDVGLGCLMFPLINQLSQMNLNL 215
              + I+     ++QPLP  +FK++L+        W    G+G     L+  L  + L  
Sbjct: 144 AAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLWAGVG-----LVGALVSIGLTG 198

Query: 216 LPVLQYTPVTVSSVEQSIVARDP------VAMALYAVVVSVCAPIWEEIVFRGFLLPSLT 269
           + V  +   T      ++V   P      ++ A    +  V AP+ EE VFRGF + SLT
Sbjct: 199 VAVSFFNGETPERETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFFMTSLT 258

Query: 270 RYMPVWSAILVSSVAFALAHFNIQRMIPLIFLGIVMGAVFVRSRNLLPSMLLHSLW 325
           +++P   AI++S+  FALAH        L  LG  +G  + ++RNLL  + +H+ W
Sbjct: 259 KWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAFW 314


>Medtr8g467540.1 | CAAX amino terminal protease family protein | HC
           | chr8:24295707-24281408 | 20130731
          Length = 338

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 102 WTVPWTAKTIVQVMLLWIASFWLVGSWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEG 161
           W VPW  +T+    L     F L G      L Y  G R + LS   +A    +      
Sbjct: 85  WEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYL-GIRPDMLSLDEKAELLFIDQGITT 143

Query: 162 VVGIAILRRCLASFQPLPPNWFKFELK------GNWQFDVGLGCLMFPLINQLSQMNLNL 215
              + I+     ++QPLP  +FK++L+        W    G+G     L+  L  + L  
Sbjct: 144 AAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLWAGVG-----LVGALVSIGLTG 198

Query: 216 LPVLQYTPVTVSSVEQSIVARDP------VAMALYAVVVSVCAPIWEEIVFRGFLLPSLT 269
           + V  +   T      ++V   P      ++ A    +  V AP+ EE VFRGF + SLT
Sbjct: 199 VAVSFFNGETPERETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFFMTSLT 258

Query: 270 RYMPVWSAILVSSVAFALAHFNIQRMIPLIFLGIVMGAVFVRSRNLLPSMLLHSLW 325
           +++P   AI++S+  FALAH        L  LG  +G  + ++RNLL  + +H+ W
Sbjct: 259 KWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAFW 314


>Medtr8g467540.3 | CAAX amino terminal protease family protein | HC
           | chr8:24295730-24289349 | 20130731
          Length = 293

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 18/213 (8%)

Query: 102 WTVPWTAKTIVQVMLLWIASFWLVGSWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEG 161
           W VPW  +T+    L     F L G      L Y  G R + LS   +A    +      
Sbjct: 85  WEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYL-GIRPDMLSLDEKAELLFIDQGITT 143

Query: 162 VVGIAILRRCLASFQPLPPNWFKFELK------GNWQFDVGLGCLMFPLINQLSQMNLNL 215
              + I+     ++QPLP  +FK++L+        W    G+G     L+  L  + L  
Sbjct: 144 AAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLWAGVG-----LVGALVSIGLTG 198

Query: 216 LPVLQYTPVTVSSVEQSIVARDP------VAMALYAVVVSVCAPIWEEIVFRGFLLPSLT 269
           + V  +   T      ++V   P      ++ A    +  V AP+ EE VFRGF + SLT
Sbjct: 199 VAVSFFNGETPERETDALVRLLPLIGSSSISTACLVGITGVFAPLLEETVFRGFFMTSLT 258

Query: 270 RYMPVWSAILVSSVAFALAHFNIQRMIPLIFLG 302
           +++P   AI++S+  FALAH        L  LG
Sbjct: 259 KWVPTPVAIILSAAVFALAHLTPGEFPQLFVLG 291


>Medtr0096s0020.1 | CAAX protease self-immunity protein | HC |
           scaffold0096:4448-11755 | 20130731
          Length = 475

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 40/72 (55%)

Query: 231 QSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSVAFALAHF 290
           + I+  + ++         +  P+ EE+V+RGFLL SL+  M    A+++SSV F+  HF
Sbjct: 189 KEILLHNDISRVCCVTAYCIVTPLLEEVVYRGFLLTSLSSTMKWQQAVVISSVVFSAIHF 248

Query: 291 NIQRMIPLIFLG 302
           + +  + L  +G
Sbjct: 249 SSENFVQLFIIG 260