Miyakogusa Predicted Gene

Lj5g3v1972330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1972330.1 Non Chatacterized Hit- tr|D8TKB2|D8TKB2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,31.56,9e-19,Abi,CAAX amino terminal protease; YHET-RELATED,NULL;
ABHYDROLASE DOMAIN-CONTAINING PROTEIN,NULL,CUFF.56287.1
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60750.1 | Symbols:  | CAAX amino terminal protease family pr...   377   e-105
AT1G14270.1 | Symbols:  | CAAX amino terminal protease family pr...    84   2e-16
AT1G14270.2 | Symbols:  | CAAX amino terminal protease family pr...    77   2e-14
AT1G14270.4 | Symbols:  | CAAX amino terminal protease family pr...    75   5e-14
AT1G14270.3 | Symbols:  | CAAX amino terminal protease family pr...    75   5e-14
AT2G20725.1 | Symbols:  | CAAX amino terminal protease family pr...    70   2e-12

>AT5G60750.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr5:24431072-24433199 FORWARD LENGTH=347
          Length = 347

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/305 (62%), Positives = 239/305 (78%), Gaps = 11/305 (3%)

Query: 24  SPLSSHISFQSFTFSTKRWRILCFRHENTPSEANGFEFEEDKLSEDLVKPKGDQSKDLKN 83
           SPL++    +S   +  +W+ILCFR+E++  E       E  + E+LVKP  D     K 
Sbjct: 41  SPLTASSPSKS---AKHKWKILCFRNEDSAPEN-----PEHFVPEELVKPDQDSPCTDKT 92

Query: 84  DWLAALDMVKTSFLG--GEPWTVPWTAKTIVQVMLLWIASFWLVGSWIVPFLAYTAGFRK 141
           DW A       + L   G  W VPWT +TIVQVMLLW+A+FW +GSW++PF+A+ +GF K
Sbjct: 93  DWKATFQKAADAVLKAIGTRWKVPWTVETIVQVMLLWVAAFWFIGSWMIPFMAHISGFHK 152

Query: 142 ETLSYRGQALYSLLTDVAEGVVGIAILRRCLASFQPLPPNWFKFELKGNWQFDVGLGCLM 201
           E+L++RGQAL+SL+TDV EG+ GIAIL RCL+ F+PL  +WF+F LKGNWQ DV +GC M
Sbjct: 153 ESLTFRGQALFSLITDVTEGLAGIAILHRCLSMFRPLASDWFRFTLKGNWQLDVIIGCFM 212

Query: 202 FPLINQLSQMNLNLLPVL-QYTPVTVSSVEQSIVARDPVAMALYAVVVSVCAPIWEEIVF 260
           FP +N+LSQ+NLNLLP+    +PV++SSVEQSI+ARDPVAMALYAVVVS+CAP+WEEIVF
Sbjct: 213 FPFVNRLSQLNLNLLPLPPTSSPVSLSSVEQSIMARDPVAMALYAVVVSICAPVWEEIVF 272

Query: 261 RGFLLPSLTRYMPVWSAILVSSVAFALAHFNIQRMIPLIFLGIVMGAVFVRSRNLLPSML 320
           RGFLLPSLTRYMPVW AILVSS+AFALAHFN+QRM+PL+FLG+V+G +F RSRNLLPSML
Sbjct: 273 RGFLLPSLTRYMPVWCAILVSSIAFALAHFNVQRMLPLVFLGVVLGLIFARSRNLLPSML 332

Query: 321 LHSLW 325
           LHSLW
Sbjct: 333 LHSLW 337


>AT1G14270.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4877195 REVERSE LENGTH=353
          Length = 353

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 18/238 (7%)

Query: 100 EPWTVPWTAKTIVQVMLLWIASFWLVG---SWIVPFLAYTAGFRKETLSYRGQALYSLLT 156
           + W VPW  +T+         SF L G     ++PFL    G   E L+   +A    L 
Sbjct: 97  QRWEVPWGWQTVSLTSFACALSFVLTGLTEMAVIPFL----GIDVEKLTLDDKAEILFLD 152

Query: 157 DVAEGVVGIAILRRCLASFQPLPPNWFKFELKGNWQFDVGLGCLMFPLINQLSQMNLNLL 216
                 V +A++     +F PLP +  +++L+     ++  G L++  I  +  +    L
Sbjct: 153 QGLTTAVVLAVIFTVAKTFDPLPEDILRYDLR--QPVNLQKGWLVWGGIGLVGAVGAIAL 210

Query: 217 PVLQYTPVTVSSVEQSI---------VARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPS 267
             +  +     + E+ +         +    ++      +  + AP+ EE VFRGF + S
Sbjct: 211 TGVVLSVFRTEAPEREVDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVS 270

Query: 268 LTRYMPVWSAILVSSVAFALAHFNIQRMIPLIFLGIVMGAVFVRSRNLLPSMLLHSLW 325
           LT+++P   AI++SS AFALAHF       L  LG V+G  + ++RNL+  M++H  W
Sbjct: 271 LTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFW 328


>AT1G14270.2 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876503 REVERSE LENGTH=247
          Length = 247

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 16/222 (7%)

Query: 115 MLLWIASFWLVG---SWIVPFLAYTAGFRKETLSYRGQALYSLLTDVAEGVVGIAILRRC 171
           ++L+  SF L G     ++PFL    G   E L+   +A    L       V +A++   
Sbjct: 6   LILFPGSFVLTGLTEMAVIPFL----GIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTV 61

Query: 172 LASFQPLPPNWFKFELK------GNWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVT 225
             +F PLP +  +++L+        W    G+G +       L+ + L++    +     
Sbjct: 62  AKTFDPLPEDILRYDLRQPVNLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRT-EAPERE 120

Query: 226 VSSVEQ--SIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSV 283
           V S+ +   ++    ++      +  + AP+ EE VFRGF + SLT+++P   AI++SS 
Sbjct: 121 VDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSA 180

Query: 284 AFALAHFNIQRMIPLIFLGIVMGAVFVRSRNLLPSMLLHSLW 325
           AFALAHF       L  LG V+G  + ++RNL+  M++H  W
Sbjct: 181 AFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFW 222


>AT1G14270.4 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 13/205 (6%)

Query: 129 IVPFLAYTAGFRKETLSYRGQALYSLLTDVAEGVVGIAILRRCLASFQPLPPNWFKFELK 188
           ++PFL    G   E L+   +A    L       V +A++     +F PLP +  +++L+
Sbjct: 3   VIPFL----GIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTVAKTFDPLPEDILRYDLR 58

Query: 189 ------GNWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVTVSSVEQ--SIVARDPVA 240
                   W    G+G +       L+ + L++    +     V S+ +   ++    ++
Sbjct: 59  QPVNLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRT-EAPEREVDSLMKLLPLIGSSNIS 117

Query: 241 MALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSVAFALAHFNIQRMIPLIF 300
                 +  + AP+ EE VFRGF + SLT+++P   AI++SS AFALAHF       L  
Sbjct: 118 TLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFI 177

Query: 301 LGIVMGAVFVRSRNLLPSMLLHSLW 325
           LG V+G  + ++RNL+  M++H  W
Sbjct: 178 LGSVLGLSYAQTRNLITPMVIHGFW 202


>AT1G14270.3 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 13/205 (6%)

Query: 129 IVPFLAYTAGFRKETLSYRGQALYSLLTDVAEGVVGIAILRRCLASFQPLPPNWFKFELK 188
           ++PFL    G   E L+   +A    L       V +A++     +F PLP +  +++L+
Sbjct: 3   VIPFL----GIDVEKLTLDDKAEILFLDQGLTTAVVLAVIFTVAKTFDPLPEDILRYDLR 58

Query: 189 ------GNWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVTVSSVEQ--SIVARDPVA 240
                   W    G+G +       L+ + L++    +     V S+ +   ++    ++
Sbjct: 59  QPVNLQKGWLVWGGIGLVGAVGAIALTGVVLSVFRT-EAPEREVDSLMKLLPLIGSSNIS 117

Query: 241 MALYAVVVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSVAFALAHFNIQRMIPLIF 300
                 +  + AP+ EE VFRGF + SLT+++P   AI++SS AFALAHF       L  
Sbjct: 118 TLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFI 177

Query: 301 LGIVMGAVFVRSRNLLPSMLLHSLW 325
           LG V+G  + ++RNL+  M++H  W
Sbjct: 178 LGSVLGLSYAQTRNLITPMVIHGFW 202


>AT2G20725.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr2:8934113-8935426 REVERSE LENGTH=301
          Length = 301

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 24/199 (12%)

Query: 139 FRKETLSYRGQALYSLLTDVAEGVVGIAILRRCLASFQPLPPNWFKFELKG----NWQFD 194
             ++ L  + Q L  ++  + E + G  +L R  A  Q    N+ K   +     NW   
Sbjct: 107 LHRQVLDPQTQVLSLVVLQMVE-LAGTVLLLRTTAKPQCKSINFLKGNNETREGRNWVVG 165

Query: 195 --VGLGCLM-FPLINQLSQMNLNLLPVLQYTPVTVSSVE-QSIVARDPVA----MALYAV 246
             +GLGCL+ F  +  L    L       + P  V   E + I+    VA     ALY V
Sbjct: 166 SALGLGCLVGFIFVTSLVADQL-------FGPKAVHESELEKIMVSGEVARSGCFALYCV 218

Query: 247 VVSVCAPIWEEIVFRGFLLPSLTRYMPVWSAILVSSVAFALAHFNIQRMIPLIFLGIVMG 306
           V    API EEIV+R FLL SL   M  W A+++SS  FA  HF+ +  + L  +G  +G
Sbjct: 219 V----APILEEIVYRRFLLTSLASRMEWWKALVISSGVFAAGHFSGEDFVQLFGIGCGLG 274

Query: 307 AVFVRSRNLLPSMLLHSLW 325
             +  S NL  S+L+HSL+
Sbjct: 275 LCYSWSGNLASSVLVHSLY 293