Miyakogusa Predicted Gene

Lj5g3v1889530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889530.1 Non Characterized Hit- tr|B7FK17|B7FK17_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,51.67,2e-18,DUF1475,Protein of unknown function
DUF1475,CUFF.56136.1
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g097430.1 | transmembrane protein, putative | HC | chr1:43...   359   1e-99
Medtr1g097430.4 | transmembrane protein, putative | HC | chr1:43...   354   4e-98
Medtr1g097430.3 | transmembrane protein, putative | HC | chr1:43...   352   2e-97
Medtr1g097430.2 | transmembrane protein, putative | HC | chr1:43...   291   3e-79

>Medtr1g097430.1 | transmembrane protein, putative | HC |
           chr1:43953316-43959197 | 20130731
          Length = 242

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 188/242 (77%), Positives = 208/242 (85%)

Query: 1   MGKIPLASGLRTLFTVLGALMLATLLYTIFTDGLPFRKELLTPWMAATLVDFYINIVPFS 60
           M  I LA+GL+TLF+VLG +MLA +LYT+ TDGLPFRKELLTPWMAATL+DFYINI   S
Sbjct: 1   MATISLANGLKTLFSVLGTIMLAIVLYTVITDGLPFRKELLTPWMAATLIDFYINIAILS 60

Query: 61  VWIAYKESNWISSLLWIIFLVCFGSITTSAYIVLQFVKLSSQECSQDPMYYVLLRHPHKN 120
            W+ YKE+NWISS+LWII L+  GSI TSAYIV+QF+KLSSQE SQDPMYYVLLR PHK+
Sbjct: 61  AWVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQESSQDPMYYVLLRQPHKS 120

Query: 121 DAEPKGKISFVAMLRIIFSILGVVMLGTLVYTLVTDGSPFRTELLTPWMVATLVDFYINV 180
             EPK K S VA LRI+F ILGVVMLGTLVYTLVTDGSPFRTELLTPWM ATLVDFYINV
Sbjct: 121 GTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSPFRTELLTPWMDATLVDFYINV 180

Query: 181 TALAVWVAYKESSWICAVLWIILLICFGSITTCVYIVCQLLQISIQDHAYLVLVPHGDRK 240
            ALAVWVAYKESSWI AV W+ILLICFGSIT+C+Y+V QL QIS QD AYL+LV H DRK
Sbjct: 181 VALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQLFQISSQDPAYLILVRHSDRK 240

Query: 241 QI 242
           QI
Sbjct: 241 QI 242


>Medtr1g097430.4 | transmembrane protein, putative | HC |
           chr1:43953316-43959197 | 20130731
          Length = 264

 Score =  354 bits (908), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 185/240 (77%), Positives = 206/240 (85%)

Query: 1   MGKIPLASGLRTLFTVLGALMLATLLYTIFTDGLPFRKELLTPWMAATLVDFYINIVPFS 60
           M  I LA+GL+TLF+VLG +MLA +LYT+ TDGLPFRKELLTPWMAATL+DFYINI   S
Sbjct: 1   MATISLANGLKTLFSVLGTIMLAIVLYTVITDGLPFRKELLTPWMAATLIDFYINIAILS 60

Query: 61  VWIAYKESNWISSLLWIIFLVCFGSITTSAYIVLQFVKLSSQECSQDPMYYVLLRHPHKN 120
            W+ YKE+NWISS+LWII L+  GSI TSAYIV+QF+KLSSQE SQDPMYYVLLR PHK+
Sbjct: 61  AWVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQESSQDPMYYVLLRQPHKS 120

Query: 121 DAEPKGKISFVAMLRIIFSILGVVMLGTLVYTLVTDGSPFRTELLTPWMVATLVDFYINV 180
             EPK K S VA LRI+F ILGVVMLGTLVYTLVTDGSPFRTELLTPWM ATLVDFYINV
Sbjct: 121 GTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSPFRTELLTPWMDATLVDFYINV 180

Query: 181 TALAVWVAYKESSWICAVLWIILLICFGSITTCVYIVCQLLQISIQDHAYLVLVPHGDRK 240
            ALAVWVAYKESSWI AV W+ILLICFGSIT+C+Y+V QL QIS QD AYL+LV H DR+
Sbjct: 181 VALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQLFQISSQDPAYLILVRHSDRQ 240


>Medtr1g097430.3 | transmembrane protein, putative | HC |
           chr1:43953374-43958491 | 20130731
          Length = 251

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 188/251 (74%), Positives = 208/251 (82%), Gaps = 9/251 (3%)

Query: 1   MGKIPLASGLRTLFTVLGALMLATLLYTIFTDGLPFRKELLTPWMAATLVDFYINIVPFS 60
           M  I LA+GL+TLF+VLG +MLA +LYT+ TDGLPFRKELLTPWMAATL+DFYINI   S
Sbjct: 1   MATISLANGLKTLFSVLGTIMLAIVLYTVITDGLPFRKELLTPWMAATLIDFYINIAILS 60

Query: 61  VWIAYKESNWISSLLWIIFLVCFGSITTSAYIVLQFVKLSSQECSQDPMYYVLLRHPHK- 119
            W+ YKE+NWISS+LWII L+  GSI TSAYIV+QF+KLSSQE SQDPMYYVLLR PHK 
Sbjct: 61  AWVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQESSQDPMYYVLLRQPHKY 120

Query: 120 --------NDAEPKGKISFVAMLRIIFSILGVVMLGTLVYTLVTDGSPFRTELLTPWMVA 171
                   +  EPK K S VA LRI+F ILGVVMLGTLVYTLVTDGSPFRTELLTPWM A
Sbjct: 121 VYKKTTIESGTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSPFRTELLTPWMDA 180

Query: 172 TLVDFYINVTALAVWVAYKESSWICAVLWIILLICFGSITTCVYIVCQLLQISIQDHAYL 231
           TLVDFYINV ALAVWVAYKESSWI AV W+ILLICFGSIT+C+Y+V QL QIS QD AYL
Sbjct: 181 TLVDFYINVVALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQLFQISSQDPAYL 240

Query: 232 VLVPHGDRKQI 242
           +LV H DRKQI
Sbjct: 241 ILVRHSDRKQI 251


>Medtr1g097430.2 | transmembrane protein, putative | HC |
           chr1:43953374-43959038 | 20130731
          Length = 198

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 156/198 (78%), Positives = 170/198 (85%)

Query: 45  MAATLVDFYINIVPFSVWIAYKESNWISSLLWIIFLVCFGSITTSAYIVLQFVKLSSQEC 104
           MAATL+DFYINI   S W+ YKE+NWISS+LWII L+  GSI TSAYIV+QF+KLSSQE 
Sbjct: 1   MAATLIDFYINIAILSAWVIYKEANWISSILWIILLIGLGSIATSAYIVVQFLKLSSQES 60

Query: 105 SQDPMYYVLLRHPHKNDAEPKGKISFVAMLRIIFSILGVVMLGTLVYTLVTDGSPFRTEL 164
           SQDPMYYVLLR PHK+  EPK K S VA LRI+F ILGVVMLGTLVYTLVTDGSPFRTEL
Sbjct: 61  SQDPMYYVLLRQPHKSGTEPKTKCSIVATLRILFGILGVVMLGTLVYTLVTDGSPFRTEL 120

Query: 165 LTPWMVATLVDFYINVTALAVWVAYKESSWICAVLWIILLICFGSITTCVYIVCQLLQIS 224
           LTPWM ATLVDFYINV ALAVWVAYKESSWI AV W+ILLICFGSIT+C+Y+V QL QIS
Sbjct: 121 LTPWMDATLVDFYINVVALAVWVAYKESSWIYAVFWVILLICFGSITSCMYVVLQLFQIS 180

Query: 225 IQDHAYLVLVPHGDRKQI 242
            QD AYL+LV H DRKQI
Sbjct: 181 SQDPAYLILVRHSDRKQI 198



 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 88/119 (73%), Gaps = 4/119 (3%)

Query: 3   KIPLASGLRTLFTVLGALMLATLLYTIFTDGLPFRKELLTPWMAATLVDFYINIVPFSVW 62
           K  + + LR LF +LG +ML TL+YT+ TDG PFR ELLTPWM ATLVDFYIN+V  +VW
Sbjct: 83  KCSIVATLRILFGILGVVMLGTLVYTLVTDGSPFRTELLTPWMDATLVDFYINVVALAVW 142

Query: 63  IAYKESNWISSLLWIIFLVCFGSITTSAYIVLQFVKLSSQECSQDPMYYVLLRHPHKND 121
           +AYKES+WI ++ W+I L+CFGSIT+  Y+VLQ  ++S    SQDP Y +L+RH  +  
Sbjct: 143 VAYKESSWIYAVFWVILLICFGSITSCMYVVLQLFQIS----SQDPAYLILVRHSDRKQ 197