Miyakogusa Predicted Gene

Lj5g3v1889530.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1889530.1 Non Chatacterized Hit- tr|B7FK17|B7FK17_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,51.67,2e-18,DUF1475,Protein of unknown function
DUF1475,CUFF.56136.1
         (732 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74755 similar to UniRef100_A7QRL1 Cluster: Chromosome...   626   e-179

>gnl|LJGI|TC74755 similar to UniRef100_A7QRL1 Cluster: Chromosome undetermined
           scaffold_151, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (39%)
          Length = 448

 Score =  626 bits (316), Expect = e-179
 Identities = 316/316 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaagattccattggcaagtggtttgagaactctcttcactgttctcggagctctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggggaagattccattggcaagtggtttgagaactctcttcactgttctcggagctctc 192

                                                                       
Query: 61  atgctcgctactcttctctacacaatcttcacagatggtcttccattccgcaaagagctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgctcgctactcttctctacacaatcttcacagatggtcttccattccgcaaagagctt 252

                                                                       
Query: 121 ctcacaccatggatggcagcaactttggttgatttctacatcaacattgtacctttcagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctcacaccatggatggcagcaactttggttgatttctacatcaacattgtacctttcagt 312

                                                                       
Query: 181 gtctggattgcttacaaggaatcaaactggatcagctcacttctgtggataatttttctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtctggattgcttacaaggaatcaaactggatcagctcacttctgtggataatttttctt 372

                                                                       
Query: 241 gtctgctttggaagcattaccacatccgcctatattgttctgcaatttgtgaagctgtca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtctgctttggaagcattaccacatccgcctatattgttctgcaatttgtgaagctgtca 432

                           
Query: 301 tctcaagaatgttcac 316
           ||||||||||||||||
Sbjct: 433 tctcaagaatgttcac 448